Os01g0763600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycerophosphoryl diester phosphodiesterase family protein.
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Os01g0763600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycerophosphoryl diester phosphodiesterase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.18 | 0.391 | 11.3 | -1.33 | 0.602 | -1.22 | 1.73 | 0.151 | -0.358 | 5.23 | 26.26 | 30 | -- | -- |
| 69.14 | 0.387 | 11.3 | -1.31 | 0.615 | -1.22 | 1.79 | -- | -0.35 | 5.19 | 26.39 | 43 | -- | -- |
| 74.72 | 0.403 | 11.4 | -1.49 | 0.644 | -1.25 | -- | 0.824 | -0.402 | 4.45 | 26.77 | 50 | -- | -- |
| 75.84 | 0.406 | 11.4 | -1.34 | 0.663 | -1.32 | -- | -- | -0.384 | 4.43 | 26.57 | 50 | -- | -- |
| 89.79 | 0.441 | 11.3 | -1.33 | -- | -1.02 | -- | 0.843 | -0.284 | -- | 24.19 | 48 | -- | -- |
| 92.32 | 0.45 | 11.3 | -1.04 | 0.407 | -- | 1.87 | -- | -0.0859 | 6.41 | -- | -- | -- | -- |
| 100.97 | 0.471 | 11.3 | -1.01 | 0.416 | -- | -- | -- | -0.0923 | 6.18 | -- | -- | -- | -- |
| 90.45 | 0.443 | 11.3 | -1.25 | -- | -1.11 | -- | -- | -0.266 | -- | 24.2 | 30 | -- | -- |
| 117.62 | 0.508 | 11.3 | -- | 0.486 | -0.793 | -- | -- | -0.126 | 4.97 | 25.6 | 10 | -- | -- |
| 109.96 | 0.49 | 11.3 | -1 | -- | -- | -- | -- | -0.0831 | -- | -- | -- | -- | -- |
| 128.04 | 0.529 | 11.3 | -- | 0.402 | -- | -- | -- | 0.0205 | 6.31 | -- | -- | -- | -- |
| 128.46 | 0.528 | 11.3 | -- | -- | -0.679 | -- | -- | -0.0639 | -- | 24.1 | 10 | -- | -- |
| 136.44 | 0.545 | 11.3 | -- | -- | -- | -- | -- | 0.028 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.43 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 3 | 65.57 | humidity | 90 | 720 | > th | dose dependent | rect. | 8 | 16 |
| 8 | 65.91 | temperature | 15 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 28 | 66.48 | humidity | 80 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 55 | 67.02 | temperature | 25 | 720 | > th | dose dependent | rect. | 14 | 18 |
| 60 | 67.13 | temperature | 25 | 720 | > th | dose dependent | sin | 15 | NA |
| 61 | 67.13 | temperature | 25 | 720 | > th | dose dependent | rect. | 14 | 11 |
| 74 | 67.26 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 135 | 67.67 | humidity | 90 | 720 | > th | dose dependent | sin | 20 | NA |
| 202 | 68.34 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 215 | 68.39 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 227 | 68.47 | radiation | 10 | 1440 | < th | dose dependent | rect. | 15 | 2 |
| 242 | 68.55 | temperature | 20 | 720 | > th | dose dependent | rect. | 10 | 15 |
| 243 | 68.55 | temperature | 15 | 720 | > th | dose dependent | rect. | 7 | 17 |
| 260 | 68.69 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 21 |
| 265 | 68.73 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 11 |
| 304 | 68.90 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 17 |
| 305 | 68.91 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 11 |
| 311 | 68.92 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 21 |
| 325 | 68.97 | humidity | 80 | 720 | > th | dose dependent | rect. | 5 | 18 |
| 355 | 69.06 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 356 | 69.07 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 12 |
| 357 | 69.08 | temperature | 10 | 1440 | > th | dose dependent | sin | 22 | NA |
| 366 | 69.11 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 412 | 69.28 | temperature | 25 | 720 | < th | dose independent | rect. | 19 | 1 |
| 449 | 69.36 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 475 | 69.42 | temperature | 25 | 30 | < th | dose dependent | rect. | 14 | 23 |
| 507 | 69.47 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 515 | 69.49 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 526 | 69.50 | temperature | 25 | 30 | < th | dose dependent | no | NA | NA |
| 532 | 69.50 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 533 | 69.50 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 535 | 69.51 | temperature | 25 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 536 | 69.51 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 539 | 69.52 | temperature | 25 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 563 | 69.57 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 569 | 69.61 | humidity | 80 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 590 | 69.64 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 10 |
| 592 | 69.64 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 17 |
| 640 | 69.71 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 644 | 69.72 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 670 | 69.76 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 20 |
| 687 | 69.81 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 692 | 69.82 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 713 | 69.85 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 4 |
| 714 | 69.85 | humidity | 90 | 720 | > th | dose independent | rect. | 8 | 16 |
| 730 | 69.87 | humidity | 80 | 1440 | < th | dose independent | sin | 0 | NA |
| 792 | 69.99 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 821 | 70.04 | humidity | 50 | 14400 | < th | dose dependent | rect. | 16 | 19 |
| 834 | 70.08 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 19 |
| 853 | 70.10 | radiation | 1 | 720 | > th | dose independent | sin | 21 | NA |
| 924 | 70.22 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 21 |
| 942 | 70.24 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 965 | 70.28 | humidity | 90 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 968 | 70.29 | radiation | 1 | 1440 | < th | dose independent | sin | 20 | NA |