BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0588400 Os01g0588400|AK107346
(311 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0588400 Band 7 protein family protein 477 e-135
Os08g0398400 Similar to Hypersensitive-induced response pro... 362 e-100
Os09g0361200 Similar to Hypersensitive-induced reaction pro... 347 6e-96
Os05g0591900 Similar to Hypersensitive-induced response pro... 346 1e-95
Os10g0464000 Similar to Hypersensitive-induced response pro... 337 5e-93
Os06g0136000 Similar to Hypersensitive-induced reaction pro... 258 5e-69
Os01g0588100 223 1e-58
>Os01g0588400 Band 7 protein family protein
Length = 311
Score = 477 bits (1228), Expect = e-135, Method: Compositional matrix adjust.
Identities = 235/263 (89%), Positives = 235/263 (89%)
Query: 30 LCCACVGQSTVAVEEAWGRYDAVLGPGCHFVPWCVGRRVAGYLSLRVQQLDVRCETKTRD 89
LCCACVGQSTVAVEEAWGRYDAVLGPGCHFVPWCVGRRVAGYLSLRVQQLDVRCETKTRD
Sbjct: 30 LCCACVGQSTVAVEEAWGRYDAVLGPGCHFVPWCVGRRVAGYLSLRVQQLDVRCETKTRD 89
Query: 90 NVFVTVVASVQYRALADRAYDAFYCLTNAHAQIQSYVFDVIRASVPNMNLDEVFGQKKXX 149
NVFVTVVASVQYRALADRAYDAFYCLTNAHAQIQSYVFDVIRASVPNMNLDEVFGQKK
Sbjct: 90 NVFVTVVASVQYRALADRAYDAFYCLTNAHAQIQSYVFDVIRASVPNMNLDEVFGQKKEV 149
Query: 150 XXXXXXXXXXXMTMYGYEIVQTLIVDIVPDEVVRRAMNDINXXXXXXXXXXXXXXXDKIQ 209
MTMYGYEIVQTLIVDIVPDEVVRRAMNDIN DKIQ
Sbjct: 150 ARAVEEELARAMTMYGYEIVQTLIVDIVPDEVVRRAMNDINAAARLRVAAAERAEADKIQ 209
Query: 210 QVKRAEGEAEAKYLAGVGVARQRQAIVEGLKRFVPNEKDVMDMVLVTQYFDTIRDIGATS 269
QVKRAEGEAEAKYLAGVGVARQRQAIVEGLKRFVPNEKDVMDMVLVTQYFDTIRDIGATS
Sbjct: 210 QVKRAEGEAEAKYLAGVGVARQRQAIVEGLKRFVPNEKDVMDMVLVTQYFDTIRDIGATS 269
Query: 270 RSSTVFIPHGPSAVRDMAAQVRD 292
RSSTVFIPHGPSAVRDMAAQVRD
Sbjct: 270 RSSTVFIPHGPSAVRDMAAQVRD 292
>Os08g0398400 Similar to Hypersensitive-induced response protein
Length = 284
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/272 (63%), Positives = 210/272 (77%), Gaps = 9/272 (3%)
Query: 30 LCCACVGQSTVAVEEAWGRYDAVLGPGCHFVPWCVGRRVAGYLSLRVQQLDVRCETKTRD 89
L V QSTVA++E++G++D VL PGCHF+PWC+G+++AGYLSLRVQQLDVRCETKT+D
Sbjct: 5 LGLVQVDQSTVAIKESFGKFDEVLEPGCHFLPWCIGKQIAGYLSLRVQQLDVRCETKTKD 64
Query: 90 NVFVTVVASVQYRALADRAYDAFYCLTNAHAQIQSYVFDVIRASVPNMNLDEVFGQKKXX 149
NVFV VVASVQYRALA++A DAFY L+N QIQSYVFDVIRASVP MNLD+ F QK
Sbjct: 65 NVFVNVVASVQYRALAEKASDAFYRLSNTREQIQSYVFDVIRASVPKMNLDDAFEQKNEI 124
Query: 150 XXXXXXXXXXXMTMYGYEIVQTLIVDIVPDEVVRRAMNDINXXXXXXXXXXXXXXXDKIQ 209
M+MYGYEIVQTLIVDI PDE V+RAMN+IN +KI
Sbjct: 125 AKAVEDELEKAMSMYGYEIVQTLIVDIEPDEHVKRAMNEINAAARLRVAANEKAEAEKIL 184
Query: 210 QVKRAEGEAEAKYLAGVGVARQRQAIVEGLKRFV---------PNEKDVMDMVLVTQYFD 260
Q+KRAEG+AE+KYLAG+G+ARQRQAIV+GL+ V + KDVMDMVLVTQYFD
Sbjct: 185 QIKRAEGDAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTSAKDVMDMVLVTQYFD 244
Query: 261 TIRDIGATSRSSTVFIPHGPSAVRDMAAQVRD 292
T+++IGA+S+SS+VFIPHGP AV+D+AAQ+RD
Sbjct: 245 TMKEIGASSKSSSVFIPHGPGAVKDIAAQIRD 276
>Os09g0361200 Similar to Hypersensitive-induced reaction protein 2 (Fragment)
Length = 317
Score = 347 bits (890), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 166/267 (62%), Positives = 206/267 (77%), Gaps = 10/267 (3%)
Query: 35 VGQSTVAVEEAWGRYDAVLGPGCHFVPWCVGRRVAGYLSLRVQQLDVRCETKTRDNVFVT 94
+ QSTVA++E +G++ VL PGCHF+PWC+G+++AGYLSLRV+QLDVRCETKT+DNVFVT
Sbjct: 41 IDQSTVAIKENFGKFSEVLEPGCHFLPWCIGQQIAGYLSLRVKQLDVRCETKTKDNVFVT 100
Query: 95 VVASVQYRALADRAYDAFYCLTNAHAQIQSYVFDVIRASVPNMNLDEVFGQKKXXXXXXX 154
VVASVQYRALAD+A DAFY L+N QIQSYVFDVIRA+VP +NLD+ F QK
Sbjct: 101 VVASVQYRALADKASDAFYKLSNTREQIQSYVFDVIRATVPKLNLDDAFEQKNDIAKAVE 160
Query: 155 XXXXXXMTMYGYEIVQTLIVDIVPDEVVRRAMNDINXXXXXXXXXXXXXXXDKIQQVKRA 214
M+ YGYEIVQTLI+DI PD V+RAMN+IN +KI Q+K+A
Sbjct: 161 DELEKAMSAYGYEIVQTLIIDIEPDVHVKRAMNEIN-AGKLRVAANEKAEAEKILQIKKA 219
Query: 215 EGEAEAKYLAGVGVARQRQAIVEGLK-------RFVP--NEKDVMDMVLVTQYFDTIRDI 265
EGEAE+KYLAGVG+ARQRQAIV+GL+ VP KD+MDMVLVTQYFDT+++I
Sbjct: 220 EGEAESKYLAGVGIARQRQAIVDGLRDSVLAFSENVPGTTAKDIMDMVLVTQYFDTMKEI 279
Query: 266 GATSRSSTVFIPHGPSAVRDMAAQVRD 292
GA+S+S++VFIPHGP AV+D+AAQ+RD
Sbjct: 280 GASSKSTSVFIPHGPGAVKDVAAQIRD 306
>Os05g0591900 Similar to Hypersensitive-induced response protein
Length = 288
Score = 346 bits (888), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 165/272 (60%), Positives = 204/272 (75%), Gaps = 9/272 (3%)
Query: 30 LCCACVGQSTVAVEEAWGRYDAVLGPGCHFVPWCVGRRVAGYLSLRVQQLDVRCETKTRD 89
CC V QSTVA+ E +G++DAVL PGCH +PW G+R+AG+L+LR+QQLDVRCETKT+D
Sbjct: 5 FCCVQVDQSTVAIREQFGKFDAVLEPGCHCLPWFAGKRIAGHLTLRLQQLDVRCETKTKD 64
Query: 90 NVFVTVVASVQYRALADRAYDAFYCLTNAHAQIQSYVFDVIRASVPNMNLDEVFGQKKXX 149
NVFV VVAS+QYRALA +A DAFY L+N +QIQ+YVFDVIRASVP +NLD+ F QK
Sbjct: 65 NVFVNVVASIQYRALAGKANDAFYKLSNTRSQIQAYVFDVIRASVPKLNLDDAFEQKNDI 124
Query: 150 XXXXXXXXXXXMTMYGYEIVQTLIVDIVPDEVVRRAMNDINXXXXXXXXXXXXXXXDKIQ 209
M+ YG+EIVQTLIVDI PDE V+RAMN+IN +KI
Sbjct: 125 AKAVEDELEKAMSAYGFEIVQTLIVDIEPDEHVKRAMNEINAAARLRVAANEKAEAEKIV 184
Query: 210 QVKRAEGEAEAKYLAGVGVARQRQAIVEGLKRFV---------PNEKDVMDMVLVTQYFD 260
Q+KRAEGEAEAKYL+G+G+ARQRQAIV+GL+ V KDVMDMVL+TQYFD
Sbjct: 185 QIKRAEGEAEAKYLSGLGIARQRQAIVDGLRDSVLGFSVNVPGTTAKDVMDMVLITQYFD 244
Query: 261 TIRDIGATSRSSTVFIPHGPSAVRDMAAQVRD 292
T+++IGA+S++S+VFIPHGP AVRD+A Q+RD
Sbjct: 245 TMKEIGASSKASSVFIPHGPGAVRDIATQIRD 276
>Os10g0464000 Similar to Hypersensitive-induced response protein
Length = 292
Score = 337 bits (865), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 161/272 (59%), Positives = 202/272 (74%), Gaps = 9/272 (3%)
Query: 30 LCCACVGQSTVAVEEAWGRYDAVLGPGCHFVPWCVGRRVAGYLSLRVQQLDVRCETKTRD 89
LCC V QSTV ++E +G+Y+ VL PGCH VPW +G RVAG L+LR++QLDVRCETKT+D
Sbjct: 12 LCCVQVDQSTVGIKERFGKYEEVLDPGCHCVPWIIGSRVAGELTLRLRQLDVRCETKTKD 71
Query: 90 NVFVTVVASVQYRALADRAYDAFYCLTNAHAQIQSYVFDVIRASVPNMNLDEVFGQKKXX 149
NVFVTVVAS+QYRA+ D+A DA+Y L+N +QIQSYVFDVIRAS+P + LD+ F QK
Sbjct: 72 NVFVTVVASIQYRAMEDKASDAYYKLSNPKSQIQSYVFDVIRASIPKLELDDAFLQKNEI 131
Query: 150 XXXXXXXXXXXMTMYGYEIVQTLIVDIVPDEVVRRAMNDINXXXXXXXXXXXXXXXDKIQ 209
M YGYEIVQTLIVDI PDE V+RAMN+IN +KI
Sbjct: 132 ARAVEEELEKAMLAYGYEIVQTLIVDIEPDEKVKRAMNEINAAARLRVAANEKAEAEKII 191
Query: 210 QVKRAEGEAEAKYLAGVGVARQRQAIVEGLKRFV---------PNEKDVMDMVLVTQYFD 260
Q+KRAEGEAEAKYL+G+G+ARQRQAIV+GL+ V + KDVMD+VL+TQYFD
Sbjct: 192 QIKRAEGEAEAKYLSGLGIARQRQAIVDGLRDSVLGFSGNVPGTSAKDVMDLVLLTQYFD 251
Query: 261 TIRDIGATSRSSTVFIPHGPSAVRDMAAQVRD 292
T+++IG+TS+SS +F+PHGP AV D+A+Q+RD
Sbjct: 252 TMKEIGSTSKSSAIFLPHGPGAVADIASQIRD 283
>Os06g0136000 Similar to Hypersensitive-induced reaction protein 4
Length = 288
Score = 258 bits (658), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 138/272 (50%), Positives = 178/272 (65%), Gaps = 9/272 (3%)
Query: 30 LCCACVGQSTVAVEEAWGRYDAVLGPGCHFVPWCVGRRVAGYLSLRVQQLDVRCETKTRD 89
L C CV Q++VAV E WGR+ + PG HF G VAG LS RVQ LDVR ETKT+D
Sbjct: 7 LLCGCVDQASVAVVEKWGRFLRLAEPGLHFFNPFAGEFVAGTLSTRVQSLDVRVETKTKD 66
Query: 90 NVFVTVVASVQYRALADRAYDAFYCLTNAHAQIQSYVFDVIRASVPNMNLDEVFGQKKXX 149
NVFV ++ ++QYR + + A DAFY L N QIQ+YVFDV+RA VP MNLD++F QK
Sbjct: 67 NVFVQLICTIQYRVVKEHADDAFYELQNPQQQIQAYVFDVVRAIVPRMNLDDLFEQKNDV 126
Query: 150 XXXXXXXXXXXMTMYGYEIVQTLIVDIVPDEVVRRAMNDINXXXXXXXXXXXXXXXDKIQ 209
M YGY I L+VDI+PD VRRAMN+IN +KI
Sbjct: 127 AKAVLQELEKVMGDYGYSIEHILMVDIIPDAAVRRAMNEINAAQRLQLASVYKGEAEKIL 186
Query: 210 QVKRAEGEAEAKYLAGVGVARQRQAIVEGLKRFVPN---------EKDVMDMVLVTQYFD 260
VK+AE EAEAK+L+GVG+ARQRQAI +GL+ + N K+VMD+++VTQYFD
Sbjct: 187 LVKKAEAEAEAKHLSGVGIARQRQAITDGLRENILNFSHSVSGTSAKEVMDLIMVTQYFD 246
Query: 261 TIRDIGATSRSSTVFIPHGPSAVRDMAAQVRD 292
TI+++G S+++TVFIPHGP VRD++ Q+R+
Sbjct: 247 TIKELGDGSKNTTVFIPHGPGHVRDISEQIRN 278
>Os01g0588100
Length = 311
Score = 223 bits (569), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/277 (46%), Positives = 175/277 (63%), Gaps = 22/277 (7%)
Query: 31 CCACVGQSTVAVEEAWGRYDAVLGPGCHFVPWCVGRRVAGYLSLRVQQLDVRCETKTRDN 90
C V +STVA+ E +G++D V+ PGCHFVPW +G + G LSLR++QL++RC TKT+DN
Sbjct: 3 CSDQVEESTVAMRERFGKFDGVMEPGCHFVPWFLGLQARGPLSLRLRQLEIRCPTKTKDN 62
Query: 91 VFVTVVASVQYRALADRAYDAFYCLTNAHAQIQSYVFDVIRASVPNMNLDEVFGQKKXXX 150
V+VT+V VQYRALAD+A AFY L N +QIQ++VFDV+R S+P + L+EVF +KK
Sbjct: 63 VYVTIVTCVQYRALADKASHAFYTLINTRSQIQAHVFDVLRTSIPKLALEEVFDKKKEIA 122
Query: 151 XXXXXXXXXXMTMYGYEIVQTLIVDIVPDEVVRRAMNDINXXXXXXXXXXXXXXXDKIQQ 210
M YGYE+++ L+VD+ P+E VRRAM + ++ +
Sbjct: 123 EALEEEVAEAMAPYGYEVMRALVVDVEPEEAVRRAMGE-------SRAAADRAVAERAAR 175
Query: 211 VKRAEGEAEAKYLAGVGVARQRQAIVEGLKRFV---------PNEKDVMDMVLVTQYFDT 261
RAE +AEA LAGVG AR RQA+V+GL+ V ++VMDMVLV QY DT
Sbjct: 176 AGRAEADAEAARLAGVGAARHRQAVVDGLRACVVAFCAAVPGATPREVMDMVLVAQYLDT 235
Query: 262 IRDIGATSRSSTV------FIPHGPSAVRDMAAQVRD 292
+R+I A S S F+PHGP+A RD AQ+RD
Sbjct: 236 VREIAAASASGCSAAAAVPFLPHGPAAARDAVAQIRD 272
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.136 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,772,349
Number of extensions: 213892
Number of successful extensions: 588
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 574
Number of HSP's successfully gapped: 7
Length of query: 311
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 210
Effective length of database: 11,762,187
Effective search space: 2470059270
Effective search space used: 2470059270
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 156 (64.7 bits)