Os01g0588400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Band 7 protein family protein.
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Os01g0588400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Band 7 protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 237.16 | 0.724 | 6.86 | 3.17 | 2.92 | 0.933 | -0.0103 | -0.4 | 0.0103 | 23.9 | 75.07 | 35 | -- | -- |
| 237.77 | 0.718 | 6.87 | 3.14 | 2.92 | 0.931 | -0.284 | -- | 0.00491 | 23.9 | 75.26 | 34 | -- | -- |
| 237.16 | 0.717 | 6.86 | 3.17 | 2.92 | 0.933 | -- | -0.404 | 0.0104 | 23.9 | 75.1 | 34 | -- | -- |
| 238.12 | 0.719 | 6.87 | 3.16 | 2.92 | 0.931 | -- | -- | 0.00635 | 23.9 | 75.27 | 34 | -- | -- |
| 565.81 | 1.11 | 6.8 | 3.37 | -- | 2.28 | -- | -0.335 | 0.00977 | -- | 77 | 9 | -- | -- |
| 278.21 | 0.782 | 6.87 | 3.02 | 3.67 | -- | -0.249 | -- | -0.00136 | 0.441 | -- | -- | -- | -- |
| 278.47 | 0.781 | 6.87 | 3.03 | 3.67 | -- | -- | -- | -0.000113 | 0.44 | -- | -- | -- | -- |
| 566.28 | 1.11 | 6.81 | 3.37 | -- | 2.27 | -- | -- | 0.0172 | -- | 77.09 | 9 | -- | -- |
| 493.31 | 1.03 | 6.94 | -- | 3.17 | 0.859 | -- | -- | -0.282 | 23.7 | 77 | 168 | -- | -- |
| 1123.07 | 1.57 | 6.8 | 3.16 | -- | -- | -- | -- | 0.0601 | -- | -- | -- | -- | -- |
| 520.39 | 1.07 | 6.94 | -- | 3.71 | -- | -- | -- | -0.338 | 0.481 | -- | -- | -- | -- |
| 861.57 | 1.37 | 6.9 | -- | -- | 2.18 | -- | -- | -0.391 | -- | 78.28 | 7 | -- | -- |
| 1385.65 | 1.74 | 6.88 | -- | -- | -- | -- | -- | -0.29 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 232.45 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 13 |
| 3 | 234.29 | humidity | 70.0 | 30 | > th | dose dependent | sin | 23 | NA |
| 10 | 236.25 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 12 |
| 16 | 237.85 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 21 | 238.54 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 2 | 16 |
| 23 | 238.81 | humidity | 80.0 | 270 | > th | dose independent | rect. | 1 | 17 |
| 29 | 239.04 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 35 | 239.44 | humidity | 80.0 | 90 | < th | dose independent | sin | 0 | NA |
| 36 | 239.44 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 23 | 22 |
| 38 | 239.55 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 41 | 239.66 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 44 | 239.76 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 15 |
| 51 | 239.96 | humidity | 60.0 | 10 | > th | dose dependent | no | NA | NA |
| 57 | 240.13 | radiation | 1.0 | 270 | > th | dose independent | sin | 1 | NA |
| 61 | 240.24 | humidity | 80.0 | 90 | > th | dose independent | sin | 0 | NA |
| 68 | 240.32 | humidity | 70.0 | 90 | > th | dose dependent | no | NA | NA |
| 71 | 240.40 | radiation | 1.0 | 270 | < th | dose independent | sin | 1 | NA |
| 76 | 240.60 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 81 | 240.67 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 93 | 240.88 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 113 | 241.24 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 118 | 241.29 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 120 | 241.36 | radiation | 1.0 | 270 | < th | dose dependent | sin | 1 | NA |
| 129 | 241.53 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 7 | 18 |
| 130 | 241.59 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 23 |
| 131 | 241.59 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 135 | 241.62 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 182 | 242.20 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 183 | 242.21 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 17 |
| 251 | 242.95 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 253 | 242.96 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 280 | 243.22 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 9 | 23 |
| 303 | 243.42 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 309 | 243.45 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 12 | 23 |
| 316 | 243.50 | humidity | 80.0 | 90 | < th | dose independent | rect. | 7 | 11 |
| 367 | 243.87 | humidity | 80.0 | 90 | < th | dose independent | rect. | 7 | 16 |
| 396 | 244.05 | humidity | 80.0 | 90 | < th | dose independent | rect. | 7 | 18 |
| 427 | 244.32 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 2 | 23 |
| 428 | 244.32 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 457 | 244.52 | humidity | 70.0 | 10 | > th | dose independent | rect. | 3 | 18 |
| 467 | 244.55 | humidity | 90.0 | 10 | < th | dose dependent | no | NA | NA |
| 474 | 244.57 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 3 | 21 |
| 478 | 244.60 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 23 |
| 502 | 244.69 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 6 | 12 |
| 509 | 244.75 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 6 | 16 |
| 513 | 244.76 | humidity | 90.0 | 10 | < th | dose dependent | sin | 23 | NA |
| 527 | 244.84 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 16 | 2 |
| 543 | 244.89 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 22 | 20 |
| 545 | 244.89 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 22 | 20 |
| 547 | 244.91 | humidity | 80.0 | 270 | > th | dose independent | rect. | 9 | 9 |
| 551 | 244.93 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 6 | 23 |
| 552 | 244.94 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 555 | 244.94 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 12 | 20 |
| 567 | 245.01 | humidity | 80.0 | 90 | > th | dose independent | rect. | 7 | 13 |
| 571 | 245.02 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 4 | 14 |
| 590 | 245.09 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 6 | 13 |
| 609 | 245.16 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 612 | 245.16 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 636 | 245.28 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 22 | 20 |
| 644 | 245.32 | humidity | 80.0 | 90 | < th | dose independent | rect. | 19 | 23 |
| 645 | 245.33 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 4 | 14 |
| 646 | 245.33 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 4 | 14 |
| 660 | 245.38 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 6 | 13 |
| 670 | 245.43 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 16 | 2 |
| 683 | 245.49 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 687 | 245.52 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 11 |
| 767 | 245.79 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 16 | 6 |
| 815 | 245.94 | humidity | 70.0 | 10 | > th | dose independent | rect. | 1 | 23 |
| 855 | 246.13 | humidity | 90.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 874 | 246.17 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 933 | 246.38 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 8 | 11 |
| 950 | 246.43 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 6 | 12 |
| 952 | 246.43 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 6 | 12 |
| 962 | 246.45 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 966 | 246.45 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 999 | 246.60 | humidity | 80.0 | 1440 | > th | dose dependent | sin | 22 | NA |