BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0564300 Os01g0564300|AK064825
(422 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0564300 Peptidylprolyl isomerase, FKBP-type domain con... 798 0.0
Os01g0563000 Peptidylprolyl isomerase, FKBP-type domain con... 278 4e-75
Os01g0562400 Peptidylprolyl isomerase, FKBP-type domain con... 197 1e-50
Os01g0562100 187 1e-47
Os04g0352400 Peptidylprolyl isomerase, FKBP-type domain con... 180 1e-45
Os08g0525600 Similar to Peptidylprolyl isomerase 176 3e-44
Os02g0491400 Similar to Peptidylprolyl isomerase 169 3e-42
>Os01g0564300 Peptidylprolyl isomerase, FKBP-type domain containing protein
Length = 422
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/422 (92%), Positives = 391/422 (92%)
Query: 1 MPIPVDLGEPDNRRFFVWVEDNILTILPPDADDHEYSGFNMWTVQKPSAGSTAINLLFPG 60
MPIPVDLGEPDNRRFFVWVEDNILTILPPDADDHEYSGFNMWTVQKPSAGSTAINLLFPG
Sbjct: 1 MPIPVDLGEPDNRRFFVWVEDNILTILPPDADDHEYSGFNMWTVQKPSAGSTAINLLFPG 60
Query: 61 GATAAELMYAVPGASKCSKPEDDDAVYCVEAQVHFIGEQLDGTEFVSTRENGVPQRFILG 120
GATAAELMYAVPGASKCSKPEDDDAVYCVEAQVHFIGEQLDGTEFVSTRENGVPQRFILG
Sbjct: 61 GATAAELMYAVPGASKCSKPEDDDAVYCVEAQVHFIGEQLDGTEFVSTRENGVPQRFILG 120
Query: 121 QENVMHGLSLVVSAMRPGERAIFTIPPKLAITKSGXXXXXXXXXXXEQTLRFEIELISLF 180
QENVMHGLSLVVSAMRPGERAIFTIPPKLAITKSG EQTLRFEIELISLF
Sbjct: 121 QENVMHGLSLVVSAMRPGERAIFTIPPKLAITKSGSPASIPSSIPPEQTLRFEIELISLF 180
Query: 181 AITDILENGSILKKIIKRPLPDKSPSNHADTVIVNYNACLEDGNSVSKSERLELNLASRT 240
AITDILENGSILKKIIKRPLPDKSPSNHADTVIVNYNACLEDGNSVSKSERLELNLASRT
Sbjct: 181 AITDILENGSILKKIIKRPLPDKSPSNHADTVIVNYNACLEDGNSVSKSERLELNLASRT 240
Query: 241 GFFCPALKYAVKTMREGEEAIFIVKPRYAFGAQGRDSTGDQAAVPPDATLYLYVQLAERK 300
GFFCPALKYAVKTMREGEEAIFIVKPRYAFGAQGRDSTGDQAAVPPDATLYLYVQLAERK
Sbjct: 241 GFFCPALKYAVKTMREGEEAIFIVKPRYAFGAQGRDSTGDQAAVPPDATLYLYVQLAERK 300
Query: 301 TAKQNEAEEKGPFIDGPNEAKTTARALPKRRPVKPGFSLPVVQNDRPTYPGHVLFVPHVV 360
TAKQNEAEEKGPFIDGPNEAKTTARALPKRRPVKPGFSLPVVQNDRPTYPGHVLFVPHVV
Sbjct: 301 TAKQNEAEEKGPFIDGPNEAKTTARALPKRRPVKPGFSLPVVQNDRPTYPGHVLFVPHVV 360
Query: 361 EEEEADXXXXXXXXXXXXXXXXXXXXDVGTSAATNSSAAQGSGIVKTETGFLFKRFRPWP 420
EEEEAD DVGTSAATNSSAAQGSGIVKTETGFLFKRFRPWP
Sbjct: 361 EEEEADAGQAASTTTSGLATPPTTAADVGTSAATNSSAAQGSGIVKTETGFLFKRFRPWP 420
Query: 421 AN 422
AN
Sbjct: 421 AN 422
>Os01g0563000 Peptidylprolyl isomerase, FKBP-type domain containing protein
Length = 422
Score = 278 bits (712), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 156/343 (45%), Positives = 200/343 (58%), Gaps = 39/343 (11%)
Query: 1 MPIPVDLGEPDNRRFFVW-----VEDNILTILPPDADDHE-----YSGFNMWTVQKPSAG 50
MPI +LGEPD + +W L D D E + GFN WTVQ+ +AG
Sbjct: 1 MPISHELGEPDESFYNLWKEECEELWEEEDELWGDEDVEEELSLRHPGFNKWTVQQGAAG 60
Query: 51 STAINLLFPGGATAAELMYAVPGASKCSKPEDDDAVYCVEAQVHFIGEQLDGTEFVSTRE 110
I D YC E QVHF GE +DGT+FVS+RE
Sbjct: 61 GDHIRA-------------------------KDKNFYCFEVQVHFTGELVDGTQFVSSRE 95
Query: 111 NGVPQRFILGQENVMHGLSLVVSAMRPGERAIFTIPPKLAITKSGXXXXXXXXXXXEQTL 170
N +P+RFILGQE+VMHG +L VS+M+PGE+AIFTIP L +TK+G QTL
Sbjct: 96 NDIPERFILGQEDVMHGFNLAVSSMQPGEKAIFTIPSALTMTKAGSPASIPSNIPPNQTL 155
Query: 171 RFEIELISLFAITDILENGSILKKIIKRPLPDKSPSNHADTVIVNYNACLEDGNSVSKSE 230
RFEIELI++F I DI ++ ILKKI+K PD+ S+ +D V V Y+ACL DG SVSKSE
Sbjct: 156 RFEIELIAMFTIIDIFKDEGILKKIVKNAEPDRKQSHSSDFVFVKYDACLMDGTSVSKSE 215
Query: 231 RLELNLASRTGFFCPALKYAVKTMREGEEAIFIVKPRYAFGAQGRDSTGDQAAVPPDATL 290
+E +L GFFCPA +AV TM+EGEEA+ IVKP+YAFG QGR S G++AAVPPDATL
Sbjct: 216 GVEFSLTD--GFFCPAFAHAVHTMKEGEEAVLIVKPKYAFGEQGRPSQGEEAAVPPDATL 273
Query: 291 YLYVQLA--ERKTAKQNEAEEKGPFIDGPNEAKTTARALPKRR 331
Y+++ R+ + +K I T ++A+ K R
Sbjct: 274 YVHLLFVCWIRRIGEDQAIAKKTLRIGNSQRIHTQSQAVVKVR 316
>Os01g0562400 Peptidylprolyl isomerase, FKBP-type domain containing protein
Length = 517
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
Query: 125 MHGLSLVVSAMRPGERAIFTIPPKLAITKSGXXXXXXXXXXXEQTLRFEIELISLFAITD 184
M G S+ VS+M+ GE+A+FTIPP+LA TKS + LRF+IELISL ITD
Sbjct: 1 MRGFSMAVSSMQAGEKAVFTIPPELAGTKSRCPVDIPGNIAPNEALRFDIELISLVTITD 60
Query: 185 ILENGSILKKIIKRPLPDKSPSNHADTVIVNYNACLEDGNSVSKSERLELNLASRTGFFC 244
IL++ ILKKIIKR L P + D +VNYNACLEDG SVS SE +E NLA GFFC
Sbjct: 61 ILDDEGILKKIIKRGLGSDKPCD-LDEALVNYNACLEDGMSVSMSEGIEFNLAE--GFFC 117
Query: 245 PALKYAVKTMREGEEAIFIVKPRYAFGAQGRDSTGDQAAVPPDATLYLYVQLAERKTAKQ 304
PA AV+TM EGEEA+ IVKP Y FG +GR S GD+A VPPDATLY+Y+QL KT +
Sbjct: 118 PAFARAVETMTEGEEAVLIVKPEYGFGERGRPSIGDEAGVPPDATLYVYLQLMSWKTVRH 177
>Os01g0562100
Length = 1342
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/175 (56%), Positives = 121/175 (69%), Gaps = 3/175 (1%)
Query: 130 LVVSAMRPGERAIFTIPPKLAITKSGXXXXXXXXXXXEQTLRFEIELISLFAITDILENG 189
+ VS+M+ GE+A+FTIPP+LA TKS Q L+F++ELISL ITDIL+N
Sbjct: 1 MAVSSMQAGEKAVFTIPPELAGTKSRCPADIPANLPPNQALQFDVELISLITITDILDNE 60
Query: 190 SILKKIIKRPLPDKSPSNHADTVIVNYNACLEDGNSVSKSERLELNLASRTGFFCPALKY 249
ILKK +KR + + P + D V+VNYNACLEDG SVS SE +E NLA GFFCPA
Sbjct: 61 GILKKTMKRGVGNDKPCD-LDEVLVNYNACLEDGMSVSMSEGVEFNLAE--GFFCPAFAR 117
Query: 250 AVKTMREGEEAIFIVKPRYAFGAQGRDSTGDQAAVPPDATLYLYVQLAERKTAKQ 304
AV+TM EGEE + IVK Y FG +GR S GD+AAVPPDATLY+Y+QL KT +
Sbjct: 118 AVETMTEGEEVVLIVKLEYGFGERGRPSIGDEAAVPPDATLYVYLQLMSWKTVRH 172
>Os04g0352400 Peptidylprolyl isomerase, FKBP-type domain containing protein
Length = 585
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 138/212 (65%), Gaps = 7/212 (3%)
Query: 90 EAQVHFIGEQLDGTEFVSTRENGVPQRFILGQENVMHGLSLVVSAMRPGERAIFTIPPKL 149
E QVH+ G LDGT+F S+R+ G P +F LGQ V+ G + M+ GE+A+FT+PP+L
Sbjct: 70 EVQVHYTGTLLDGTKFDSSRDRGTPFKFSLGQGEVIKGWDEGIKTMKKGEQAVFTVPPEL 129
Query: 150 AITKSGXXXXXXXXXXXEQTLRFEIELISLFAITDILENGSILKKIIKRPLPDKSPSNHA 209
A ++G TLRF++EL+S ++ DI ++G I KK++ ++P +
Sbjct: 130 AYGEAGSPPAIPPNA----TLRFDVELLSWASVKDICKDGGIFKKVLAEGHKWENPKD-L 184
Query: 210 DTVIVNYNACLEDGNSVSKSERLELNLASRTGFFCPALKYAVKTMREGEEAIFIVKPRYA 269
D V+V Y A LEDG VSKS+ +E A + G+FCPAL AVKTM++GE+ + VKP+Y
Sbjct: 185 DEVLVKYEARLEDGTVVSKSDGVEF--AVKDGYFCPALSKAVKTMKKGEKVLLTVKPQYG 242
Query: 270 FGAQGRDSTGDQAAVPPDATLYLYVQLAERKT 301
FG QG+ ++G +AAVPP+ATLY+ ++L KT
Sbjct: 243 FGEQGKPASGAEAAVPPNATLYVDLELLSWKT 274
>Os08g0525600 Similar to Peptidylprolyl isomerase
Length = 580
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 131/212 (61%), Gaps = 7/212 (3%)
Query: 90 EAQVHFIGEQLDGTEFVSTRENGVPQRFILGQENVMHGLSLVVSAMRPGERAIFTIPPKL 149
E +VH+ G LDG +F S+R+ G P +F LGQ V+ G L + M+ GE A+FTIPP L
Sbjct: 66 EVEVHYTGTLLDGKKFDSSRDRGTPFKFKLGQGQVIKGWDLGIKTMKKGENAVFTIPPDL 125
Query: 150 AITKSGXXXXXXXXXXXEQTLRFEIELISLFAITDILENGSILKKIIKRPLPDKSPSNHA 209
A +SG TL+F++EL+S ++ DI ++G I KKI+K ++P +
Sbjct: 126 AYGESGSPPTIPASA----TLQFDVELLSWTSVKDICQDGGIFKKILKEGEKWENPKD-L 180
Query: 210 DTVIVNYNACLEDGNSVSKSERLELNLASRTGFFCPALKYAVKTMREGEEAIFIVKPRYA 269
D V V Y A LEDG +SKSE E + + GFFCPAL AVKTM++ E+ + VKP+Y
Sbjct: 181 DEVFVKYEARLEDGTVISKSEGAEFTV--KDGFFCPALAKAVKTMKKAEKVLLTVKPQYG 238
Query: 270 FGAQGRDSTGDQAAVPPDATLYLYVQLAERKT 301
FG GR + G++ AVPP+ATL + ++L KT
Sbjct: 239 FGENGRPAAGEEGAVPPNATLLVNLELVSWKT 270
>Os02g0491400 Similar to Peptidylprolyl isomerase
Length = 682
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 132/211 (62%), Gaps = 7/211 (3%)
Query: 90 EAQVHFIGEQLDGTEFVSTRENGVPQRFILGQENVMHGLSLVVSAMRPGERAIFTIPPKL 149
E QVH+ G LDGT+F S+R+ P +F LGQ V+ G L + M+ GE AIFTIPP+L
Sbjct: 115 EVQVHYTGTLLDGTKFDSSRDRDAPFKFTLGQGQVIKGWDLGIKTMKKGENAIFTIPPEL 174
Query: 150 AITKSGXXXXXXXXXXXEQTLRFEIELISLFAITDILENGSILKKIIKRPLPDKSPSNHA 209
A + G TL+F++ELIS ++ DI ++G ILKK++ ++P +
Sbjct: 175 AYGEDGSPPVIPPNA----TLQFDVELISWESVKDICKDGGILKKVLAEGTKWENPRDR- 229
Query: 210 DTVIVNYNACLEDGNSVSKSERLELNLASRTGFFCPALKYAVKTMREGEEAIFIVKPRYA 269
D V V Y LEDG V++S+ +E + + G FCPA+ AVKTM++ E+A+ VKP+Y
Sbjct: 230 DEVFVKYEVRLEDGTVVAESDGVEFTV--KDGHFCPAISKAVKTMKKNEKALLTVKPQYG 287
Query: 270 FGAQGRDSTGDQAAVPPDATLYLYVQLAERK 300
FG QGR + D+AA+PP+ATL++ ++L K
Sbjct: 288 FGEQGRPAARDEAAIPPNATLHINLELVSWK 318
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 16/227 (7%)
Query: 74 ASKCSKPEDDDAVYCVEAQVHFIGEQLDGTEFVSTRENGVPQRFILGQENVMHGLSLVVS 133
+K P D D V+ V+ +V DGT V +GV F + + +S V
Sbjct: 220 GTKWENPRDRDEVF-VKYEVRL----EDGT--VVAESDGV--EFTVKDGHFCPAISKAVK 270
Query: 134 AMRPGERAIFTIPPKLAITKSGXXXXXXXXXXX-EQTLRFEIELISLFAITDILENGSIL 192
M+ E+A+ T+ P+ + G TL +EL+S A+T+I + IL
Sbjct: 271 TMKKNEKALLTVKPQYGFGEQGRPAARDEAAIPPNATLHINLELVSWKAVTEIGNDKKIL 330
Query: 193 KKIIKRPLPDKSPSNHADTVIVNYNACLEDGNS-VSKSERLE--LNLASRTGFFCPALKY 249
KKI+ + PS+ V V LEDG V++ + + L
Sbjct: 331 KKILHEGEGYERPSD-CTLVRVKLIGKLEDGTIFVTRGHDGDEPFEFKTDEDQVVEGLDK 389
Query: 250 AVKTMREGEEAIFIVKPRYAFGAQGRDSTGDQAAVPPDATLYLYVQL 296
AV +M++GE A+ + P YAFG+ ++ D + VPP++T+Y V+L
Sbjct: 390 AVLSMKKGEVALVTIPPEYAFGSD--ETRQDLSVVPPNSTVYYEVEL 434
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.135 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,350,487
Number of extensions: 583771
Number of successful extensions: 1258
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1229
Number of HSP's successfully gapped: 8
Length of query: 422
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 318
Effective length of database: 11,605,545
Effective search space: 3690563310
Effective search space used: 3690563310
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 157 (65.1 bits)