BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0390900 Os01g0390900|AK103881
(199 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0390900 Similar to Dual-specificity protein phosphatas... 414 e-116
Os01g0311500 Similar to PROPYZAMIDE-HTPERSENSITIVE 1 90 1e-18
Os01g0347000 Similar to PROPYZAMIDE-HTPERSENSITIVE 1 88 4e-18
Os11g0136800 Similar to Dual specificity protein phosphatas... 86 2e-17
Os12g0133700 Similar to Dual specificity protein phosphatas... 86 2e-17
Os02g0720300 Dual specificity protein phosphatase domain co... 78 4e-15
Os06g0308100 Dual specificity protein phosphatase domain co... 69 3e-12
>Os01g0390900 Similar to Dual-specificity protein phosphatase-like protein
Length = 199
Score = 414 bits (1063), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/199 (100%), Positives = 199/199 (100%)
Query: 1 MSMPEAGRSERDGREQDDDYEQQQARVLMALMQGFCAARYRKADNIPCPIVQGLYLGSVG 60
MSMPEAGRSERDGREQDDDYEQQQARVLMALMQGFCAARYRKADNIPCPIVQGLYLGSVG
Sbjct: 1 MSMPEAGRSERDGREQDDDYEQQQARVLMALMQGFCAARYRKADNIPCPIVQGLYLGSVG 60
Query: 61 AAMNKDALKSLNITHILIVARSLNPAFAAEFNYKKIEVLDSPDIDLAKHFDECFSFIDES 120
AAMNKDALKSLNITHILIVARSLNPAFAAEFNYKKIEVLDSPDIDLAKHFDECFSFIDES
Sbjct: 61 AAMNKDALKSLNITHILIVARSLNPAFAAEFNYKKIEVLDSPDIDLAKHFDECFSFIDES 120
Query: 121 ISSGGNVLVHCFAGRSRSVTIIVAYLMKKHQMSLENALSLVRSKRPQVAPNEGFMSQLEN 180
ISSGGNVLVHCFAGRSRSVTIIVAYLMKKHQMSLENALSLVRSKRPQVAPNEGFMSQLEN
Sbjct: 121 ISSGGNVLVHCFAGRSRSVTIIVAYLMKKHQMSLENALSLVRSKRPQVAPNEGFMSQLEN 180
Query: 181 FEKSMQVEQERKLMQPVQN 199
FEKSMQVEQERKLMQPVQN
Sbjct: 181 FEKSMQVEQERKLMQPVQN 199
>Os01g0311500 Similar to PROPYZAMIDE-HTPERSENSITIVE 1
Length = 997
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 47 PCPIVQGLYLGSVGAAMNKDALKSLNITHILIVARS----LNPAFAAEFNYKKIEVLDSP 102
P ++ L++G AA + L+ L ITHIL + + + F F YK + D
Sbjct: 768 PSLVINNLFIGGALAARSMYTLQHLGITHILCLCSNEIGQSDSQFPDLFEYKNFSISDDD 827
Query: 103 DIDLAKHFDECFSFIDESISSGGNVLVHCFAGRSRSVTIIVAYLMKKHQMSLENALSLVR 162
D +++ F+E + D GG VLVHCF G+SRS TI++AYLM + ++L A +L++
Sbjct: 828 DANISDLFEEASDYFDHVDHVGGKVLVHCFEGKSRSATIVLAYLMLRKGLTLAKAWNLLK 887
Query: 163 SKRPQVAPNEGFMSQLENFEK------SMQVEQERKLMQ 195
+ PN+GF L ++ SM + +R M+
Sbjct: 888 KVHRRAQPNDGFAKALLALDRKLHGKVSMDWQHKRPEMK 926
>Os01g0347000 Similar to PROPYZAMIDE-HTPERSENSITIVE 1
Length = 871
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 83/159 (52%), Gaps = 10/159 (6%)
Query: 47 PCPIVQGLYLGSVGAAMNKDALKSLNITHIL-IVARSLNPAFAAE---FNYKKIEVLDSP 102
P I LY+G AA + LK L ITH+L + A + A + + F+Y+ + D
Sbjct: 647 PSQITDYLYIGGALAARSTYTLKHLGITHVLCLCANEIGQAESQQPDRFDYQNFSINDDE 706
Query: 103 DIDLAKHFDECFSFIDESISSGGNVLVHCFAGRSRSVTIIVAYLMKKHQMSLENALSLVR 162
+ D++ F + FID G VLVHCF G+SRS T+++AYLM + + +L A ++++
Sbjct: 707 NADISDVFQDASDFIDYVQHLHGKVLVHCFEGKSRSATVVLAYLMLRKKFTLLEAWNMLK 766
Query: 163 SKRPQVAPNEGFMSQLENFEK------SMQVEQERKLMQ 195
+ PN+GF L + +K SM+ R M+
Sbjct: 767 KVHRRAHPNDGFAKVLLDLDKKLHGKISMEWHHRRPAMK 805
>Os11g0136800 Similar to Dual specificity protein phosphatase 19 (EC 3.1.3.48)
(EC 3.1.3.16) (Stress-activated protein kinase
pathway-regulating phosphatase 1) (Protein phosphatase
SKRP1). Splice isoform 2
Length = 356
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 96 IEVLDSPDIDLAKHFDECFSFIDESISSGGNVLVHCFAGRSRSVTIIVAYLMKKHQMSLE 155
+ + D+ + +L H + C FIDE G NVLVHCFAG SRS TIIVAYLM+ Q SLE
Sbjct: 99 VPLRDTEEENLLDHLEPCLDFIDEGRKEG-NVLVHCFAGVSRSATIIVAYLMRTEQKSLE 157
Query: 156 NALSLVRSKRPQVAPNEGFMSQLENFEK 183
AL ++ PN+GF+ QL+ FE+
Sbjct: 158 EALESLKEVNESACPNDGFLEQLKLFEE 185
>Os12g0133700 Similar to Dual specificity protein phosphatase 19 (EC 3.1.3.48)
(EC 3.1.3.16) (Stress-activated protein kinase
pathway-regulating phosphatase 1) (Protein phosphatase
SKRP1). Splice isoform 2
Length = 356
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 96 IEVLDSPDIDLAKHFDECFSFIDESISSGGNVLVHCFAGRSRSVTIIVAYLMKKHQMSLE 155
+ + D+ + +L H + C FIDE G NVLVHCFAG SRS TIIVAYLM+ Q SLE
Sbjct: 99 VPLRDTEEENLLDHLEPCLDFIDEGRKEG-NVLVHCFAGVSRSATIIVAYLMRTEQKSLE 157
Query: 156 NALSLVRSKRPQVAPNEGFMSQLENFEK 183
AL ++ PN+GF+ QL+ FE+
Sbjct: 158 EALESLKEVNESACPNDGFLEQLKLFEE 185
>Os02g0720300 Dual specificity protein phosphatase domain containing protein
Length = 268
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Query: 54 LYLGSVGAAMNKDALKSLNITHILIVARSLNPAFAAEFNYKKIEVLDSPDIDLAKHFDEC 113
L+LGS A + LK+L+ITHIL + F Y I+ S D D A F
Sbjct: 56 LFLGSYNNASRSEVLKTLSITHILNTVPDCQNLYRNSFTYHCIQDERSLDFDGANRF--- 112
Query: 114 FSFIDESISSGGNVLVHCFAGRSRSVTIIVAYLMKKHQMSLENALSLVRSKRPQVAPNEG 173
+++ VLVHC +G++RS I++ YLMK L + V+ +RPQV
Sbjct: 113 ---LEQCERETSRVLVHCMSGKNRSAAIVIGYLMKSRGWRLSQSYQWVKDRRPQV----- 164
Query: 174 FMSQLENFEKSMQVEQERKLMQP 196
QL + ++ VE E+KL P
Sbjct: 165 ---QLTDASQNQLVEYEQKLFGP 184
>Os06g0308100 Dual specificity protein phosphatase domain containing protein
Length = 279
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 54 LYLGSVGAAMNKDALKSLNITHILIVARSLNPAFAAEFNYKKIEVLDSPDIDLAKHFDEC 113
L+LGS A + LK++ I+HIL + F Y ++ + FD+
Sbjct: 65 LFLGSYDNASRSELLKTIGISHILNTVPLCQNLYRNSFTYHCLQ------DEKTLQFDDA 118
Query: 114 FSFIDESISSGGNVLVHCFAGRSRSVTIIVAYLMKKHQMSLENALSLVRSKRPQVAPNEG 173
F+++ VLVHC +G+SRS ++A+LMK L V+ +RPQV +
Sbjct: 119 IQFLEQCERDKARVLVHCMSGKSRSAAFVIAFLMKTKGWRLSQCFQWVKERRPQVQLADA 178
Query: 174 FMSQLENFEKSM 185
QL +E+ +
Sbjct: 179 AQRQLIEYEQKL 190
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.133 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,168,631
Number of extensions: 221548
Number of successful extensions: 626
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 622
Number of HSP's successfully gapped: 7
Length of query: 199
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 103
Effective length of database: 12,023,257
Effective search space: 1238395471
Effective search space used: 1238395471
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 153 (63.5 bits)