Os01g0390900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dual-specificity protein phosphatase-like protein.
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Os01g0390900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dual-specificity protein phosphatase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.41 | 0.287 | 13.1 | -1.32 | 1.19 | 0.552 | 0.0722 | 2.35 | -0.246 | 5.47 | 30.99 | 514 | -- | -- |
| 40.59 | 0.297 | 13.1 | -0.938 | 1.2 | 0.649 | 0.556 | -- | -0.141 | 5.82 | 78.33 | 243 | -- | -- |
| 37.42 | 0.285 | 13.1 | -1.33 | 1.19 | 0.554 | -- | 2.39 | -0.247 | 5.48 | 30.97 | 505 | -- | -- |
| 41.39 | 0.3 | 13 | -0.883 | 1.16 | 0.706 | -- | -- | -0.136 | 5.83 | 82.83 | 230 | -- | -- |
| 87.48 | 0.436 | 13.1 | -1 | -- | 1.75 | -- | 2.46 | -0.0602 | -- | 50.53 | 327 | -- | -- |
| 45.3 | 0.316 | 13.1 | -1.04 | 1.35 | -- | 0.723 | -- | -0.233 | 5.67 | -- | -- | -- | -- |
| 46.56 | 0.32 | 13.1 | -1.03 | 1.35 | -- | -- | -- | -0.236 | 5.62 | -- | -- | -- | -- |
| 91.65 | 0.446 | 13 | -0.616 | -- | 1.82 | -- | -- | 0.0447 | -- | 63.38 | 315 | -- | -- |
| 45.99 | 0.316 | 13 | -- | 1.36 | 0.863 | -- | -- | 0.137 | 5.57 | 43.18 | 47520 | -- | -- |
| 141.1 | 0.555 | 13.1 | -0.99 | -- | -- | -- | -- | -0.203 | -- | -- | -- | -- | -- |
| 74.73 | 0.404 | 13 | -- | 1.33 | -- | -- | -- | -0.121 | 5.65 | -- | -- | -- | -- |
| 100.96 | 0.468 | 13 | -- | -- | 2.03 | -- | -- | 0.137 | -- | 75.05 | 320 | -- | -- |
| 166.97 | 0.603 | 13.1 | -- | -- | -- | -- | -- | -0.0935 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.63 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 3 | 37.07 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 21 |
| 5 | 37.13 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 19 |
| 7 | 37.20 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 15 | 37.29 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 21 |
| 34 | 37.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 21 |
| 43 | 37.45 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 50 | 37.48 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 53 | 37.49 | temperature | 15 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 62 | 37.53 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 3 |
| 67 | 37.56 | temperature | 25 | 720 | < th | dose dependent | sin | 0 | NA |
| 96 | 37.62 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 22 |
| 105 | 37.64 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 154 | 37.73 | wind | 1 | 14400 | < th | dose dependent | rect. | 18 | 5 |
| 173 | 37.76 | temperature | 25 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 215 | 37.84 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 271 | 37.91 | temperature | 25 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 272 | 37.91 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 286 | 37.92 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 5 |
| 314 | 37.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 315 | 37.95 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 334 | 37.97 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 355 | 37.98 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 18 |
| 360 | 37.99 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 3 |
| 380 | 38.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 18 |
| 400 | 38.02 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 5 |
| 415 | 38.03 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 477 | 38.07 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 3 |
| 557 | 38.12 | temperature | 20 | 720 | > th | dose independent | rect. | 6 | 20 |
| 685 | 38.20 | temperature | 30 | 1440 | < th | dose dependent | sin | 5 | NA |
| 791 | 38.25 | temperature | 20 | 1440 | > th | dose independent | rect. | 8 | 19 |
| 821 | 38.27 | temperature | 20 | 1440 | > th | dose independent | sin | 17 | NA |
| 875 | 38.29 | temperature | 25 | 720 | < th | dose independent | rect. | 18 | 20 |
| 876 | 38.29 | temperature | 10 | 1440 | > th | dose dependent | sin | 6 | NA |
| 933 | 38.31 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 9 |
| 954 | 38.32 | temperature | 20 | 1440 | < th | dose independent | sin | 17 | NA |
| 985 | 38.32 | temperature | 15 | 720 | > th | dose dependent | rect. | 9 | 23 |