Os01g0311500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to PROPYZAMIDE-HTPERSENSITIVE 1.
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Os01g0311500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to PROPYZAMIDE-HTPERSENSITIVE 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.13 | 0.258 | 8.72 | 0.754 | 0.259 | 1.26 | -0.0448 | -1.96 | 0.222 | 2.19 | 20.13 | 1233 | -- | -- |
| 32.03 | 0.264 | 8.66 | 1.19 | 0.432 | 1.35 | -0.361 | -- | 0.342 | 3.02 | 16.98 | 1964 | -- | -- |
| 30.14 | 0.256 | 8.72 | 0.752 | 0.258 | 1.26 | -- | -1.98 | 0.222 | 2.19 | 20.15 | 1231 | -- | -- |
| 31.28 | 0.26 | 8.66 | 1.2 | 0.416 | 1.52 | -- | -- | 0.345 | 3.08 | 14.24 | 1988 | -- | -- |
| 33.43 | 0.269 | 8.72 | 0.756 | -- | 1.37 | -- | -1.99 | 0.22 | -- | 20.15 | 1158 | -- | -- |
| 71.35 | 0.396 | 8.6 | 1.71 | 0.43 | -- | -0.116 | -- | 0.636 | 1.84 | -- | -- | -- | -- |
| 71.4 | 0.396 | 8.6 | 1.71 | 0.43 | -- | -- | -- | 0.637 | 1.83 | -- | -- | -- | -- |
| 36.04 | 0.28 | 8.66 | 1.14 | -- | 1.51 | -- | -- | 0.337 | -- | 13.8 | 2504 | -- | -- |
| 48.77 | 0.325 | 8.75 | -- | 0.34 | 2.05 | -- | -- | -0.0365 | 1.83 | -55.41 | 8385 | -- | -- |
| 82.59 | 0.425 | 8.59 | 1.73 | -- | -- | -- | -- | 0.647 | -- | -- | -- | -- | -- |
| 148.81 | 0.571 | 8.64 | -- | 0.461 | -- | -- | -- | 0.446 | 1.93 | -- | -- | -- | -- |
| 55.65 | 0.347 | 8.75 | -- | -- | 2.11 | -- | -- | -0.0432 | -- | -68.14 | 8288 | -- | -- |
| 161.67 | 0.593 | 8.63 | -- | -- | -- | -- | -- | 0.455 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.82 | temperature | 10 | 4320 | > th | dose dependent | rect. | 17 | 12 |
| 2 | 29.84 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 3 |
| 3 | 29.85 | temperature | 30 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 10 | 29.88 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 3 |
| 82 | 30.14 | temperature | 10 | 4320 | > th | dose dependent | sin | 13 | NA |
| 91 | 30.16 | temperature | 20 | 1440 | > th | dose dependent | sin | 13 | NA |
| 98 | 30.16 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 15 |
| 111 | 30.20 | temperature | 30 | 4320 | < th | dose dependent | sin | 12 | NA |
| 195 | 30.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 276 | 30.42 | temperature | 10 | 4320 | > th | dose dependent | rect. | 2 | 3 |
| 282 | 30.42 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 22 |
| 286 | 30.43 | temperature | 30 | 4320 | < th | dose dependent | rect. | 2 | 3 |
| 353 | 30.49 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 356 | 30.49 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 21 |
| 481 | 30.56 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 22 |
| 627 | 30.64 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 670 | 30.66 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 22 |
| 748 | 30.71 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 856 | 30.76 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 867 | 30.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 898 | 30.77 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 930 | 30.79 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 933 | 30.79 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 23 |
| 951 | 30.80 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 954 | 30.80 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 981 | 30.81 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 23 |