Os01g0347000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to PROPYZAMIDE-HTPERSENSITIVE 1.
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Os01g0347000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to PROPYZAMIDE-HTPERSENSITIVE 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.32 | 0.291 | 2.93 | -0.0431 | 0.0133 | 0.171 | -0.291 | 3.1 | -0.0806 | 6.84 | 0.6183 | 10 | -- | -- |
| 40.07 | 0.295 | 2.93 | -0.0548 | 0.00127 | 0.802 | -0.283 | -- | -0.0653 | 7.02 | 0.08439 | 8 | -- | -- |
| 38.25 | 0.288 | 2.92 | -0.0446 | 0.0544 | 0.142 | -- | 3.08 | -0.0847 | 8.85 | 0.1924 | 8 | -- | -- |
| 40 | 0.295 | 2.94 | -0.0818 | 0.0771 | 0.889 | -- | -- | -0.0647 | 13.9 | 9.282e-05 | 8 | -- | -- |
| 38.34 | 0.288 | 2.93 | -0.0497 | -- | 0.195 | -- | 2.8 | -0.0774 | -- | 0.1502 | 8 | -- | -- |
| 43.59 | 0.31 | 2.94 | -0.0136 | 0.0277 | -- | -0.319 | -- | -0.0858 | 9.67 | -- | -- | -- | -- |
| 43.97 | 0.311 | 2.94 | -0.0254 | 0.0294 | -- | -- | -- | -0.0861 | 10.6 | -- | -- | -- | -- |
| 40.29 | 0.296 | 2.93 | -0.07 | -- | 0.815 | -- | -- | -0.0709 | -- | 0.09755 | 8 | -- | -- |
| 40.11 | 0.295 | 2.93 | -- | 0.0718 | 0.842 | -- | -- | -0.0612 | 13.6 | 0.04195 | 8 | -- | -- |
| 44.02 | 0.31 | 2.94 | -0.0259 | -- | -- | -- | -- | -0.0863 | -- | -- | -- | -- | -- |
| 43.99 | 0.31 | 2.94 | -- | 0.0295 | -- | -- | -- | -0.0833 | 10.7 | -- | -- | -- | -- |
| 40.42 | 0.296 | 2.93 | -- | -- | 0.797 | -- | -- | -0.0636 | -- | 0.08584 | 8 | -- | -- |
| 44.04 | 0.31 | 2.94 | -- | -- | -- | -- | -- | -0.0834 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.11 | wind | 1.0 | 10 | < th | dose independent | rect. | 23 | 1 |
| 5 | 35.11 | wind | 1.0 | 10 | < th | dose dependent | rect. | 23 | 1 |
| 15 | 35.46 | wind | 1.0 | 10 | < th | dose dependent | rect. | 15 | 11 |
| 31 | 35.50 | wind | 1.0 | 10 | < th | dose dependent | rect. | 12 | 13 |
| 57 | 35.82 | wind | 1.0 | 10 | < th | dose dependent | rect. | 5 | 21 |
| 67 | 35.90 | wind | 1.0 | 10 | < th | dose dependent | rect. | 8 | 18 |
| 75 | 35.97 | wind | 1.0 | 10 | < th | dose independent | rect. | 15 | 10 |
| 77 | 35.98 | wind | 1.0 | 10 | < th | dose independent | rect. | 17 | 8 |
| 135 | 36.36 | wind | 1.0 | 90 | < th | dose independent | rect. | 22 | 2 |
| 161 | 36.47 | wind | 1.0 | 10 | < th | dose dependent | sin | 17 | NA |
| 210 | 36.93 | wind | 1.0 | 90 | < th | dose independent | rect. | 16 | 8 |
| 218 | 37.00 | wind | 1.0 | 90 | < th | dose independent | rect. | 14 | 10 |
| 295 | 37.60 | wind | 1.0 | 90 | < th | dose independent | rect. | 9 | 15 |
| 314 | 37.78 | wind | 1.0 | 30 | < th | dose independent | rect. | 6 | 19 |
| 461 | 38.70 | wind | 1.0 | 10 | < th | dose independent | sin | 16 | NA |
| 502 | 38.85 | wind | 1.0 | 10 | < th | dose dependent | rect. | 23 | 11 |
| 520 | 38.91 | wind | 1.0 | 10 | < th | dose dependent | rect. | 15 | 19 |
| 674 | 39.06 | wind | 1.0 | 10 | < th | dose dependent | no | NA | NA |
| 713 | 39.14 | wind | 1.0 | 10 | > th | dose independent | sin | 15 | NA |
| 879 | 39.81 | temperature | 20.0 | 90 | < th | dose independent | rect. | 22 | 1 |
| 896 | 39.93 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 897 | 39.93 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 8 | 1 |