Os02g0720300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Dual specificity protein phosphatase domain containing protein.
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Os02g0720300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Dual specificity protein phosphatase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.3 | 0.259 | 10.6 | -0.771 | 0.54 | 1.35 | 0.218 | -2.33 | 0.0507 | 5.1 | 15.78 | 607 | -- | -- |
| 34 | 0.272 | 10.5 | -0.361 | 0.514 | 1.37 | 0.642 | -- | 0.163 | 5.4 | 14.79 | 649 | -- | -- |
| 30.36 | 0.257 | 10.6 | -0.794 | 0.563 | 1.33 | -- | -2.48 | 0.0428 | 4.96 | 16.13 | 572 | -- | -- |
| 34.9 | 0.275 | 10.5 | -0.349 | 0.512 | 1.33 | -- | -- | 0.167 | 5.17 | 14.7 | 650 | -- | -- |
| 34.44 | 0.273 | 10.6 | -1.02 | -- | 1.09 | -- | -2.23 | -0.00752 | -- | 16.1 | 2491 | -- | -- |
| 56.82 | 0.353 | 10.5 | -0.0217 | 0.341 | -- | -0.0125 | -- | 0.371 | 2.48 | -- | -- | -- | -- |
| 56.82 | 0.353 | 10.5 | -0.0214 | 0.341 | -- | -- | -- | 0.371 | 2.49 | -- | -- | -- | -- |
| 38.26 | 0.288 | 10.5 | -0.442 | -- | 1.11 | -- | -- | 0.15 | -- | 12.98 | 2509 | -- | -- |
| 37.74 | 0.286 | 10.5 | -- | 0.488 | 1.18 | -- | -- | 0.224 | 4.92 | 14.53 | 636 | -- | -- |
| 63.64 | 0.373 | 10.5 | -0.00691 | -- | -- | -- | -- | 0.38 | -- | -- | -- | -- | -- |
| 56.83 | 0.353 | 10.5 | -- | 0.34 | -- | -- | -- | 0.373 | 2.49 | -- | -- | -- | -- |
| 41.53 | 0.3 | 10.5 | -- | -- | 1.07 | -- | -- | 0.232 | -- | 14.8 | 1142 | -- | -- |
| 63.65 | 0.372 | 10.5 | -- | -- | -- | -- | -- | 0.38 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.13 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 2 | 29.13 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 4 | 29.33 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 17 |
| 16 | 29.55 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 41 | 29.84 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 45 | 29.87 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 9 |
| 60 | 30.03 | temperature | 15 | 720 | > th | dose dependent | sin | 10 | NA |
| 91 | 30.23 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 98 | 30.26 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 14 |
| 104 | 30.29 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 117 | 30.34 | temperature | 30 | 720 | < th | dose dependent | sin | 10 | NA |
| 132 | 30.37 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 134 | 30.37 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 149 | 30.42 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 151 | 30.42 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 4 |
| 157 | 30.42 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 170 | 30.45 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 10 |
| 173 | 30.46 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 7 |
| 174 | 30.46 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 11 |
| 183 | 30.47 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 187 | 30.47 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 7 |
| 209 | 30.49 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 327 | 30.61 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 360 | 30.65 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 366 | 30.66 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 401 | 30.68 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 489 | 30.79 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 496 | 30.81 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 516 | 30.83 | temperature | 15 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 534 | 30.87 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 652 | 31.03 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 678 | 31.06 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 740 | 31.14 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 749 | 31.15 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 762 | 31.15 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 795 | 31.19 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 822 | 31.22 | temperature | 15 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 886 | 31.31 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 893 | 31.32 | radiation | 30 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 971 | 31.42 | radiation | 1 | 14400 | < th | dose dependent | rect. | 3 | 4 |
| 978 | 31.42 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 23 |