BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0720300 Os02g0720300|AK102281
(268 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0720300 Dual specificity protein phosphatase domain co... 561 e-160
Os06g0308100 Dual specificity protein phosphatase domain co... 377 e-105
Os01g0390900 Similar to Dual-specificity protein phosphatas... 78 7e-15
Os01g0347000 Similar to PROPYZAMIDE-HTPERSENSITIVE 1 69 5e-12
>Os02g0720300 Dual specificity protein phosphatase domain containing protein
Length = 268
Score = 561 bits (1447), Expect = e-160, Method: Compositional matrix adjust.
Identities = 268/268 (100%), Positives = 268/268 (100%)
Query: 1 MRKRERENPCEICGHYHNSEEGERCGVCGHRSGPMAGEPPATLDPAFPTEVLKDFLFLGS 60
MRKRERENPCEICGHYHNSEEGERCGVCGHRSGPMAGEPPATLDPAFPTEVLKDFLFLGS
Sbjct: 1 MRKRERENPCEICGHYHNSEEGERCGVCGHRSGPMAGEPPATLDPAFPTEVLKDFLFLGS 60
Query: 61 YNNASRSEVLKTLSITHILNTVPDCQNLYRNSFTYHCIQDERSLDFDGANRFLEQCERET 120
YNNASRSEVLKTLSITHILNTVPDCQNLYRNSFTYHCIQDERSLDFDGANRFLEQCERET
Sbjct: 61 YNNASRSEVLKTLSITHILNTVPDCQNLYRNSFTYHCIQDERSLDFDGANRFLEQCERET 120
Query: 121 SRVLVHCMSGKNRSAAIVIGYLMKSRGWRLSQSYQWVKDRRPQVQLTDASQNQLVEYEQK 180
SRVLVHCMSGKNRSAAIVIGYLMKSRGWRLSQSYQWVKDRRPQVQLTDASQNQLVEYEQK
Sbjct: 121 SRVLVHCMSGKNRSAAIVIGYLMKSRGWRLSQSYQWVKDRRPQVQLTDASQNQLVEYEQK 180
Query: 181 LFGPNVGAPAQSSVPTESFRPLGFGFPKPAGDIQAPVFNQQPVPSIFERVNPSNIPSNFT 240
LFGPNVGAPAQSSVPTESFRPLGFGFPKPAGDIQAPVFNQQPVPSIFERVNPSNIPSNFT
Sbjct: 181 LFGPNVGAPAQSSVPTESFRPLGFGFPKPAGDIQAPVFNQQPVPSIFERVNPSNIPSNFT 240
Query: 241 FGAMEANTPMDDNGAPAPTSGDNPMDSS 268
FGAMEANTPMDDNGAPAPTSGDNPMDSS
Sbjct: 241 FGAMEANTPMDDNGAPAPTSGDNPMDSS 268
>Os06g0308100 Dual specificity protein phosphatase domain containing protein
Length = 279
Score = 377 bits (968), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/289 (65%), Positives = 220/289 (76%), Gaps = 31/289 (10%)
Query: 1 MRKRERENPCEICGHYHNSEEGERCGVCGHRSGPMAGEPPATL----------------D 44
MRKRERENPC ICGHYH E GE CGVCGHR PPA+ D
Sbjct: 1 MRKRERENPCGICGHYHKYELGEVCGVCGHR-------PPASAGAQAAAGAAQAAAPRQD 53
Query: 45 PAFPTEVLKDFLFLGSYNNASRSEVLKTLSITHILNTVPDCQNLYRNSFTYHCIQDERSL 104
AFP+E+LKDFLFLGSY+NASRSE+LKT+ I+HILNTVP CQNLYRNSFTYHC+QDE++L
Sbjct: 54 SAFPSEILKDFLFLGSYDNASRSELLKTIGISHILNTVPLCQNLYRNSFTYHCLQDEKTL 113
Query: 105 DFDGANRFLEQCERETSRVLVHCMSGKNRSAAIVIGYLMKSRGWRLSQSYQWVKDRRPQV 164
FD A +FLEQCER+ +RVLVHCMSGK+RSAA VI +LMK++GWRLSQ +QWVK+RRPQV
Sbjct: 114 QFDDAIQFLEQCERDKARVLVHCMSGKSRSAAFVIAFLMKTKGWRLSQCFQWVKERRPQV 173
Query: 165 QLTDASQNQLVEYEQKLFGPNVGAPAQSSVPTESFRPLGFGFPKPAGDIQAPVFNQQPVP 224
QL DA+Q QL+EYEQKLF VG PAQ+ VPT++F LGFGFPKP+GDIQ P+FNQQ
Sbjct: 174 QLADAAQRQLIEYEQKLFNSTVGIPAQAFVPTDAFPSLGFGFPKPSGDIQVPIFNQQ--A 231
Query: 225 SIFERVNPSNIPSNFTFGA---MEANTPMDDN--GAPAPTSGDNPMDSS 268
SIFERV+P NIPSNFTFGA E P D+N G + GD+ MDSS
Sbjct: 232 SIFERVSPHNIPSNFTFGAERTTEVKLP-DNNSFGVVNSSGGDSMMDSS 279
>Os01g0390900 Similar to Dual-specificity protein phosphatase-like protein
Length = 199
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Query: 56 LFLGSYNNASRSEVLKTLSITHILNTVPDCQNLYRNSFTYHCIQDERSLDFDGANRF--- 112
L+LGS A + LK+L+ITHIL + F Y I+ S D D A F
Sbjct: 54 LYLGSVGAAMNKDALKSLNITHILIVARSLNPAFAAEFNYKKIEVLDSPDIDLAKHFDEC 113
Query: 113 ---LEQCERETSRVLVHCMSGKNRSAAIVIGYLMKSRGWRLSQSYQWVKDRRPQV----- 164
+++ VLVHC +G++RS I++ YLMK L + V+ +RPQV
Sbjct: 114 FSFIDESISSGGNVLVHCFAGRSRSVTIIVAYLMKKHQMSLENALSLVRSKRPQVAPNEG 173
Query: 165 ---QLTDASQNQLVEYEQKLFGP 184
QL + ++ VE E+KL P
Sbjct: 174 FMSQLENFEKSMQVEQERKLMQP 196
>Os01g0347000 Similar to PROPYZAMIDE-HTPERSENSITIVE 1
Length = 871
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 10/142 (7%)
Query: 52 LKDFLFLGSYNNASRSEVLKTLSITHIL----NTVPDCQNLYRNSFTYH--CIQDERSLD 105
+ D+L++G A + LK L ITH+L N + ++ + F Y I D+ + D
Sbjct: 650 ITDYLYIGGALAARSTYTLKHLGITHVLCLCANEIGQAESQQPDRFDYQNFSINDDENAD 709
Query: 106 ----FDGANRFLEQCERETSRVLVHCMSGKNRSAAIVIGYLMKSRGWRLSQSYQWVKDRR 161
F A+ F++ + +VLVHC GK+RSA +V+ YLM + + L +++ +K
Sbjct: 710 ISDVFQDASDFIDYVQHLHGKVLVHCFEGKSRSATVVLAYLMLRKKFTLLEAWNMLKKVH 769
Query: 162 PQVQLTDASQNQLVEYEQKLFG 183
+ D L++ ++KL G
Sbjct: 770 RRAHPNDGFAKVLLDLDKKLHG 791
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.134 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,393,143
Number of extensions: 478139
Number of successful extensions: 1129
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 1124
Number of HSP's successfully gapped: 4
Length of query: 268
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 169
Effective length of database: 11,866,615
Effective search space: 2005457935
Effective search space used: 2005457935
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 155 (64.3 bits)