BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0337900 Os01g0337900|AK120645
(561 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0337900 Similar to Dihydrolipoamide dehydrogenase 980 0.0
Os01g0328700 Dihydrolipoamide dehydrogenase family protein 236 4e-62
Os05g0156700 Pyridine nucleotide-disulphide oxidoreductase,... 217 2e-56
Os03g0163300 Similar to Glutathione reductase (Fragment) 170 2e-42
Os02g0813500 Glutathione reductase, cytosolic (EC 1.8.1.7) ... 151 1e-36
Os10g0415300 Similar to Glutathione reductase (Fragment) 138 1e-32
Os10g0415112 Similar to Glutathione reductase (Fragment) 108 1e-23
>Os01g0337900 Similar to Dihydrolipoamide dehydrogenase
Length = 561
Score = 980 bits (2534), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/532 (91%), Positives = 489/532 (91%)
Query: 30 ELRFCGLRREALGLRSLXXXXXXXXXXXXXXXXXXXXXXXXXXFDYDXXXXXXXXXXXXX 89
ELRFCGLRREALGLRSL FDYD
Sbjct: 30 ELRFCGLRREALGLRSLRAPPRAAATPRKAAAATGNGAAGSGGFDYDLVIIGAGVGGHGA 89
Query: 90 XXXXVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQDEHHMKSLGLQVSTA 149
VEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQDEHHMKSLGLQVSTA
Sbjct: 90 ALHAVEKGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELQDEHHMKSLGLQVSTA 149
Query: 150 GYDRQAVADHANNLASKIRSNLTNSMKALGVDILTGFGTIVGKQKVRYGKVGFPDNEITA 209
GYDRQAVADHANNLASKIRSNLTNSMKALGVDILTGFGTIVGKQKVRYGKVGFPDNEITA
Sbjct: 150 GYDRQAVADHANNLASKIRSNLTNSMKALGVDILTGFGTIVGKQKVRYGKVGFPDNEITA 209
Query: 210 RNIIIATGSVPFVPNGIEIDGKTVFTSDHALKLESVPDWIAIVGSGYIGLEFSDVYTALG 269
RNIIIATGSVPFVPNGIEIDGKTVFTSDHALKLESVPDWIAIVGSGYIGLEFSDVYTALG
Sbjct: 210 RNIIIATGSVPFVPNGIEIDGKTVFTSDHALKLESVPDWIAIVGSGYIGLEFSDVYTALG 269
Query: 270 SEVTFVEALDQLMPGFDPEIAKLAQRILINPRKIDYHTGVFASKITPAKDGKPVLIELID 329
SEVTFVEALDQLMPGFDPEIAKLAQRILINPRKIDYHTGVFASKITPAKDGKPVLIELID
Sbjct: 270 SEVTFVEALDQLMPGFDPEIAKLAQRILINPRKIDYHTGVFASKITPAKDGKPVLIELID 329
Query: 330 AKTKEHKETLEVDAALIATGRAPFTKGLGLENVNVVTQRGFVPVDERMQVMDADGNAVPN 389
AKTKEHKETLEVDAALIATGRAPFTKGLGLENVNVVTQRGFVPVDERMQVMDADGNAVPN
Sbjct: 330 AKTKEHKETLEVDAALIATGRAPFTKGLGLENVNVVTQRGFVPVDERMQVMDADGNAVPN 389
Query: 390 LYCIGDANGKLMLAHAASAQGISVVERISGKDNILNHLSIPAACFTHPEISMVGLTEPQA 449
LYCIGDANGKLMLAHAASAQGISVVERISGKDNILNHLSIPAACFTHPEISMVGLTEPQA
Sbjct: 390 LYCIGDANGKLMLAHAASAQGISVVERISGKDNILNHLSIPAACFTHPEISMVGLTEPQA 449
Query: 450 REKADKEGFEISVVKTSFKANTKALAENEGDGLAKMIYRPDTGEILGVHILGLHAADLIH 509
REKADKEGFEISVVKTSFKANTKALAENEGDGLAKMIYRPDTGEILGVHILGLHAADLIH
Sbjct: 450 REKADKEGFEISVVKTSFKANTKALAENEGDGLAKMIYRPDTGEILGVHILGLHAADLIH 509
Query: 510 EASNAIALGTRVQDIKFAVHAHPTLSEVLDELFKAAKVNAGVPHSVNEPVAA 561
EASNAIALGTRVQDIKFAVHAHPTLSEVLDELFKAAKVNAGVPHSVNEPVAA
Sbjct: 510 EASNAIALGTRVQDIKFAVHAHPTLSEVLDELFKAAKVNAGVPHSVNEPVAA 561
>Os01g0328700 Dihydrolipoamide dehydrogenase family protein
Length = 503
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 159/449 (35%), Positives = 235/449 (52%), Gaps = 24/449 (5%)
Query: 97 GLKTAIIEG-DVVGGTCVNRGCVPSKALLAVSGRMRELQDE--HHMKSLGLQVSTAGYDR 153
GLKT IE +GGTC+N GC+PSKALL S E + HH G++ S D
Sbjct: 62 GLKTTCIEKRGTLGGTCLNVGCIPSKALLHSSHMYHEAKSSFAHH----GVKFSNLEVDL 117
Query: 154 QAVADHANNLASKIRSNLTNSMKALGVDILTGFGTIVGKQKVRYGKVGFPDNEITARNII 213
A+ + + + + K V + GFG + +V + +NII
Sbjct: 118 PAMMAQKDKAVAGLTKGIEGLFKKNKVTYVKGFGKLASPSEVSVDLSDGGSTVVKGKNII 177
Query: 214 IATGS-VPFVPNGIEIDGKTVFTSDHALKLESVPDWIAIVGSGYIGLEFSDVYTALGSEV 272
IATGS V +P G+ ID K + +S AL L +P + ++G+GYIGLE V+ LGSEV
Sbjct: 178 IATGSDVKSLP-GVTIDEKKIVSSTGALCLSEIPKKLVVIGAGYIGLEMGSVWNRLGSEV 236
Query: 273 TFVEALDQLMPGFDPEIAKLAQRILINPRKIDYHTGVFASKITPAKDGKPVLIELIDAKT 332
T VE ++P D E+ K QR+L +K+ + + + DG + +E
Sbjct: 237 TVVEFAPDIVPSMDGEVRKQFQRML-EKQKMKFMLKTKVVGVDTSGDGVKLTLE---PAA 292
Query: 333 KEHKETLEVDAALIATGRAPFTKGLGLENVNVVTQR-GFVPVDERMQVMDADGNAVPNLY 391
+ +E D L++ GR P+T G+GLE+V V T + G + VD+R V +Y
Sbjct: 293 GGEQSVIEADIVLVSAGRVPYTAGIGLESVGVETDKAGRILVDKRFM------TNVNGVY 346
Query: 392 CIGDANGKLMLAHAASAQGISVVERISGKDNILNHLSIPAACFTHPEISMVGLTEPQARE 451
IGDA MLAH A G++ VE I+GK+ +++ ++P +THPE++ VG TE Q +
Sbjct: 347 AIGDAIPGPMLAHKAEEDGVACVEFIAGKEGHVDYDTVPGVVYTHPEVASVGKTEEQVKA 406
Query: 452 KADKEGFEISVVKTSFKANTKALAENEGDGLAKMIYRPDTGEILGVHILGLHAADLIHEA 511
G V K AN++A A ++ +GL K++ +T +ILGVHI+ A ++IHEA
Sbjct: 407 L----GIPYRVGKFPLLANSRAKAIDDAEGLVKVVAEKETDKILGVHIMAPGAGEIIHEA 462
Query: 512 SNAIALGTRVQDIKFAVHAHPTLSEVLDE 540
A+ G +DI HAHPT+SE L E
Sbjct: 463 VLALQYGASSEDIARTCHAHPTVSEALKE 491
>Os05g0156700 Pyridine nucleotide-disulphide oxidoreductase, class I family
protein
Length = 157
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/109 (94%), Positives = 108/109 (99%)
Query: 377 MQVMDADGNAVPNLYCIGDANGKLMLAHAASAQGISVVERISGKDNILNHLSIPAACFTH 436
M+VMDADGN VPNLYCIGDANGKLMLAHAASAQGISVVE+ISG+D+ILNHLSIPAACFTH
Sbjct: 1 MRVMDADGNVVPNLYCIGDANGKLMLAHAASAQGISVVEQISGRDHILNHLSIPAACFTH 60
Query: 437 PEISMVGLTEPQAREKADKEGFEISVVKTSFKANTKALAENEGDGLAKM 485
PEISMVGLTEPQAREKADKEGFEISVVKTSFKANTKALAENEGDGLAK+
Sbjct: 61 PEISMVGLTEPQAREKADKEGFEISVVKTSFKANTKALAENEGDGLAKV 109
>Os03g0163300 Similar to Glutathione reductase (Fragment)
Length = 555
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/437 (32%), Positives = 215/437 (49%), Gaps = 41/437 (9%)
Query: 108 VGGTCVNRGCVPSKALLAVSGRMRELQDEHHMKSLGLQVST-AGYDRQAVADHANNLASK 166
VGGTCV RGCVP K L+ S E ++ H G T +D + + N +
Sbjct: 122 VGGTCVLRGCVPKKLLVYGSKYSHEFEESH---GFGWVYETDPKHDWNTLIANKNTELQR 178
Query: 167 IRSNLTNSMKALGVDILTGFGTIVGKQKVRY-GKVGFPDNEITARNIIIATGSVPFVPN- 224
+ N + GV ++ G G IV V GK+ TARNI+IA G P +PN
Sbjct: 179 LVGIYKNILNNSGVTLIEGRGKIVDPHTVSVDGKL------YTARNILIAVGGRPSMPNI 232
Query: 225 -GIEIDGKTVFTSDHALKLESVPDWIAIVGSGYIGLEFSDVYTALGSEVTFVEALDQLMP 283
GIE V SD AL L S P+ IAIVG GYI LEF+ ++ L SEV +++
Sbjct: 233 PGIE----HVIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFNGLKSEVHVFIRQKKVLR 288
Query: 284 GFDPEIAK-LAQRILINPRKIDYHTGVFASKITPAKDGKPVLIELIDAKTKEHKETL-EV 341
GFD E+ +A+++ + R I +HT IT + DG L+ L K +KET+
Sbjct: 289 GFDEEVRDFIAEQMSL--RGITFHTEQSPQAITKSNDG---LLSL-----KTNKETIGGF 338
Query: 342 DAALIATGRAPFTKGLGLENVNV-VTQRGFVPVDERMQVMDADGNAVPNLYCIGDANGKL 400
+ ATGR P TK LGLE V V + + G + VDE + +V +++ +GD ++
Sbjct: 339 SHVMFATGRKPNTKNLGLEEVGVKLDKNGAIMVDEYSR------TSVDSIWAVGDVTDRV 392
Query: 401 MLAHAASAQGISVVERISGKDNIL-NHLSIPAACFTHPEISMVGLTEPQAREKADKEGFE 459
L A +G + + + G + ++ ++P+A F+ P I VGLTE QA E E +
Sbjct: 393 NLTPVALMEGGAFAKTVFGDEPTKPDYRAVPSAVFSQPPIGQVGLTEEQAIE----EYGD 448
Query: 460 ISVVKTSFKANTKALAENEGDGLAKMIYRPDTGEILGVHILGLHAADLIHEASNAIALGT 519
+ + +F+ L+ K+I T +++GVH+ G A ++I + A+ G
Sbjct: 449 VDIYTANFRPLRATLSGLPDRIFMKLIVCATTNKVVGVHMCGEDAPEIIQGVAIAVKAGL 508
Query: 520 RVQDIKFAVHAHPTLSE 536
QD + HPT +E
Sbjct: 509 TKQDFDATIGIHPTSAE 525
>Os02g0813500 Glutathione reductase, cytosolic (EC 1.8.1.7) (GR) (GRase)
Length = 496
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 206/432 (47%), Gaps = 28/432 (6%)
Query: 109 GGTCVNRGCVPSKALLAVSGRMRELQDEHHMKSLGLQVS-TAGYDRQAVADHANNLASKI 167
GGTCV RGCVP K L+ S E +D K+ G +++ ++ + + ++ ++
Sbjct: 67 GGTCVIRGCVPKKILVYGSSFRGEFED---AKNFGWEINGDINFNWKRLLENKTQEIVRL 123
Query: 168 RSNLTNSMKALGVDILTGFGTIVGKQKVRYGKVGFPDNEITARNIIIATGSVPFVPNGIE 227
+ GV ++ G G++V V K TA++I+IATGS +
Sbjct: 124 NGVYQRILGNSGVTMIEGAGSLVDAHTVEVTKPDGSKQRYTAKHILIATGSRA---QRVN 180
Query: 228 IDGKTV-FTSDHALKLESVPDWIAIVGSGYIGLEFSDVYTALGSEVTFVEALDQLMPGFD 286
I GK + TSD AL LE +P I+G GYI +EF+ ++ +G+ V + + GFD
Sbjct: 181 IPGKELAITSDEALSLEELPKRAVILGGGYIAVEFASIWKGMGAHVDLFYRKELPLRGFD 240
Query: 287 PEIAKLAQRILINPRKIDYHTGVFASKITPAKDGKPVLIELIDAKTKEHKETLEVDAALI 346
E+ + L R I H G S+++ DG I+++ K +E + D L
Sbjct: 241 DEMRTVVASNL-EGRGIRLHPGTNLSELSKTADG----IKVVTDKGEE----IIADVVLF 291
Query: 347 ATGRAPFTKGLGLENVNV-VTQRGFVPVDERMQVMDADGNAVPNLYCIGDANGKLMLAHA 405
ATGR P ++ L LE V V G + VD D +VPN++ +GD ++ L
Sbjct: 292 ATGRTPNSQRLNLEAAGVEVDNIGAIKVD------DYSRTSVPNIWAVGDVTNRINLTPV 345
Query: 406 ASAQGISVVERI-SGKDNILNHLSIPAACFTHPEISMVGLTEPQAREKADKEGFEISVVK 464
A + + + G+ ++ +P A F+ P +S+VGL+E QA E+A ++ V
Sbjct: 346 ALMEATCFSKTVFGGQPTKPDYRDVPCAVFSIPPLSVVGLSEQQALEEAKS---DVLVYT 402
Query: 465 TSFKANTKALAENEGDGLAKMIYRPDTGEILGVHILGLHAADLIHEASNAIALGTRVQDI 524
+SF ++++ + + K++ +T ++LG + G A ++I + A+ G
Sbjct: 403 SSFNPMKNSISKRQEKTVMKLVVDSETDKVLGASMCGPDAPEIIQGMAVALKCGATKATF 462
Query: 525 KFAVHAHPTLSE 536
V HP+ +E
Sbjct: 463 DSTVGIHPSAAE 474
>Os10g0415300 Similar to Glutathione reductase (Fragment)
Length = 387
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 182/372 (48%), Gaps = 33/372 (8%)
Query: 172 TNSMKALGVDILTGFGTIVGKQKVRY-GKVGFPDNEITARNIIIATGSVPFVPN--GIEI 228
TN +K GV I+ G G +V V GK+ TA+NI+IA G P +P+ GIE
Sbjct: 16 TNMLKNSGVTIIEGRGKVVDPHTVSVDGKL------YTAKNILIAVGGRPSMPDIPGIE- 68
Query: 229 DGKTVFTSDHALKLESVPDWIAIVGSGYIGLEFSDVYTALGSEVTFVEALDQLMPGFDPE 288
V SD AL L S P+ IAIVG GYI LEF+ ++ L S V +++ GFD E
Sbjct: 69 ---HVIDSDAALDLPSRPEKIAIVGGGYIALEFAGIFNGLKSGVHVFIRQKKVLRGFDEE 125
Query: 289 IAKLAQRILINPRKIDYHTGVFASKITPAKDGKPVLIELIDAKTKEHKETLEVDAALIAT 348
+ + + R I +HT + + DG L+ L K + + AT
Sbjct: 126 VRDFVADQM-SLRGITFHTEETPQAVMKSDDG---LLTLTTNKGSING----FSHVMFAT 177
Query: 349 GRAPFTKGLGLENVNV-VTQRGFVPVDERMQVMDADGNAVPNLYCIGDANGKLMLAHAAS 407
GR P TK LGLE V V + + G + VDE + +V +++ +GD ++ L A
Sbjct: 178 GRKPNTKNLGLEEVGVKMDKHGAIVVDEFSR------TSVDSIWAVGDVTNRVNLTPVAL 231
Query: 408 AQGISVVERISGKDNIL-NHLSIPAACFTHPEISMVGLTEPQAREKADKEGFEISVVKTS 466
+G ++ I G + ++ ++P+A F+ P I VGLTE +A EK ++ V ++
Sbjct: 232 MEGGALARTIFGNEPTKPDYSAVPSAVFSQPPIGQVGLTEEKAIEKYG----DVDVYTSN 287
Query: 467 FKANTKALAENEGDGLAKMIYRPDTGEILGVHILGLHAADLIHEASNAIALGTRVQDIKF 526
F+ L+ K+I +T ++LGVH+ G A ++I + A+ G Q+
Sbjct: 288 FRPLRATLSGLPDRVYMKVIVCANTNKVLGVHVCGEDAPEIIQGIAIAVKAGLMKQNFDA 347
Query: 527 AVHAHPTLSEVL 538
+ HPT +E L
Sbjct: 348 TIGVHPTTAEEL 359
>Os10g0415112 Similar to Glutathione reductase (Fragment)
Length = 493
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 171/432 (39%), Gaps = 100/432 (23%)
Query: 108 VGGTCVNRGCVPSKALLAVSGRMRELQDEHHMKSLGLQVST-AGYDRQAVADHANNLASK 166
VGGTCV RGCVP K L+ S E ++ H G + T +D + + N +
Sbjct: 133 VGGTCVLRGCVPKKLLVYASKYSHEFEESH---GFGWRYGTEPKHDWSTLMTNKNLELQR 189
Query: 167 IRSNLTNSMKALGVDILTGFGTIVGKQKVRYGKVGFPDNEITARNIIIATGSVPFVPNGI 226
+ TN +K GV I+ G G +V S+P +P GI
Sbjct: 190 LVGVQTNMLKNSGVTIIEGRGKLV------------------------VVHSMPDIP-GI 224
Query: 227 EIDGKTVFTSDHALKLESVPDWIAIVGSGYIGLEFSDVYTALGSEVTFVEALDQLMPGFD 286
E V SD +L L S P+ IAIVG GYI LEF+ ++ L S V +++ GFD
Sbjct: 225 E----HVIDSDASLDLPSRPEKIAIVGGGYIALEFAGIFNGLKSGVHVFIRQKKVLRGFD 280
Query: 287 PEIAKLAQRILINPRKIDYHTGVFASKITPAKDGKPVLIELIDAKTKEHKETLEVDAALI 346
E+ + + R I +HT + + DG L+ L K +
Sbjct: 281 EEVRDFVADQM-SLRGITFHTEETPQAVMKSDDG---LLTLTTNKGSING---------- 326
Query: 347 ATGRAPFTKGLGLENVNVVTQRGFVPVDERMQVMDADGNAVPNLYCIGDANGKLMLAHAA 406
F+ LGLE V V MD G V L
Sbjct: 327 ------FSHNLGLEEVGV--------------KMDKHGAIVGEL---------------- 350
Query: 407 SAQGISVVERISGKDNILNHLSIPAACFTHPEISMVGLTEPQAREKADKEGFEISVVKTS 466
+N ++P+A F+ P I VGLTE +A EK ++ V ++
Sbjct: 351 -------------DTGCINGSAVPSAVFSQPPIGQVGLTEEKAIEKYG----DVDVYTSN 393
Query: 467 FKANTKALAENEGDGLAKMIYRPDTGEILGVHILGLHAADLIHEASNAIALGTRVQDIKF 526
F+ L+ K+I +T ++LGVH+ G A ++I + A+ G Q+
Sbjct: 394 FRPLRATLSGLPDRVYMKVIVCANTNKVLGVHVCGEDAPEIIQGIAIAVKAGLMKQNFDA 453
Query: 527 AVHAHPTLSEVL 538
+ HPT +E L
Sbjct: 454 TIGVHPTTAEEL 465
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.135 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,630,545
Number of extensions: 630886
Number of successful extensions: 1534
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1513
Number of HSP's successfully gapped: 7
Length of query: 561
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 455
Effective length of database: 11,501,117
Effective search space: 5233008235
Effective search space used: 5233008235
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 159 (65.9 bits)