Os02g0813500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutathione reductase, cytosolic (EC 1.8.1.7) (GR) (GRase).
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Os02g0813500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutathione reductase, cytosolic (EC 1.8.1.7) (GR) (GRase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.87 | 0.269 | 12.9 | -0.0885 | 0.164 | -0.272 | -0.168 | -1.16 | 0.0895 | 23.3 | 50.04 | 4217 | -- | -- |
| 34.97 | 0.275 | 12.9 | -0.0679 | 0.18 | -0.606 | -0.12 | -- | 0.14 | 22.8 | 51 | 6228 | -- | -- |
| 32.98 | 0.267 | 12.9 | -0.0872 | 0.165 | -0.27 | -- | -1.14 | 0.0902 | 23.5 | 50 | 4228 | -- | -- |
| 34.56 | 0.274 | 12.9 | -0.1 | 0.175 | -0.666 | -- | -- | 0.119 | 23.8 | 51 | 5441 | -- | -- |
| 34.69 | 0.274 | 12.9 | -0.0901 | -- | -0.287 | -- | -1.12 | 0.102 | -- | 50 | 4191 | -- | -- |
| 40.89 | 0.3 | 12.9 | 0.0734 | 0.19 | -- | -0.0322 | -- | 0.0414 | 23.7 | -- | -- | -- | -- |
| 40.89 | 0.299 | 12.9 | 0.0746 | 0.19 | -- | -- | -- | 0.0415 | 23.7 | -- | -- | -- | -- |
| 35.04 | 0.276 | 12.9 | -0.185 | -- | -0.69 | -- | -- | 0.0994 | -- | 48 | 4208 | -- | -- |
| 34.74 | 0.275 | 12.9 | -- | 0.16 | -0.642 | -- | -- | 0.125 | 23.6 | 51 | 5437 | -- | -- |
| 43.16 | 0.307 | 12.9 | 0.0801 | -- | -- | -- | -- | 0.0438 | -- | -- | -- | -- | -- |
| 41.04 | 0.3 | 12.9 | -- | 0.191 | -- | -- | -- | 0.0332 | 23.7 | -- | -- | -- | -- |
| 35.79 | 0.279 | 12.9 | -- | -- | -0.585 | -- | -- | 0.103 | -- | 48.27 | 4217 | -- | -- |
| 43.33 | 0.307 | 12.9 | -- | -- | -- | -- | -- | 0.0349 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.57 | wind | 1 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 2 | 29.65 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 3 | 29.74 | wind | 1 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 4 | 29.75 | wind | 1 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 6 | 29.76 | wind | 1 | 14400 | > th | dose independent | rect. | 22 | 15 |
| 7 | 29.81 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 9 | 29.85 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 15 |
| 14 | 29.97 | wind | 1 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 19 | 30.03 | wind | 3 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 20 | 30.05 | wind | 1 | 14400 | < th | dose dependent | rect. | 22 | 15 |
| 23 | 30.09 | wind | 1 | 14400 | > th | dose independent | rect. | 7 | 6 |
| 30 | 30.13 | wind | 1 | 14400 | > th | dose independent | sin | 3 | NA |
| 37 | 30.16 | wind | 1 | 14400 | < th | dose dependent | rect. | 7 | 3 |
| 41 | 30.19 | wind | 1 | 14400 | < th | dose dependent | rect. | 22 | 12 |
| 44 | 30.21 | wind | 1 | 14400 | < th | dose independent | rect. | 7 | 6 |
| 60 | 30.28 | wind | 1 | 14400 | < th | dose independent | sin | 3 | NA |
| 61 | 30.28 | wind | 1 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 70 | 30.31 | wind | 1 | 14400 | < th | dose dependent | rect. | 5 | 8 |
| 87 | 30.37 | wind | 1 | 14400 | < th | dose dependent | rect. | 7 | 6 |
| 89 | 30.38 | wind | 1 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 98 | 30.40 | humidity | 60 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 119 | 30.46 | wind | 9 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 120 | 30.46 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 123 | 30.46 | wind | 1 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 135 | 30.50 | wind | 1 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 141 | 30.52 | wind | 1 | 14400 | < th | dose dependent | sin | 4 | NA |
| 158 | 30.55 | wind | 9 | 14400 | < th | dose dependent | rect. | 17 | 15 |
| 174 | 30.57 | wind | 1 | 14400 | > th | dose dependent | rect. | 17 | 15 |
| 207 | 30.64 | humidity | 90 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 211 | 30.66 | radiation | 40 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 231 | 30.70 | wind | 1 | 14400 | < th | dose dependent | rect. | 24 | 3 |
| 303 | 30.81 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 318 | 30.83 | radiation | 30 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 344 | 30.86 | wind | 9 | 14400 | < th | dose dependent | sin | 11 | NA |
| 397 | 30.92 | wind | 1 | 14400 | > th | dose dependent | sin | 12 | NA |
| 406 | 30.93 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 3 |
| 422 | 30.94 | radiation | 30 | 43200 | > th | dose independent | rect. | 15 | 21 |
| 467 | 30.99 | wind | 9 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 473 | 30.99 | humidity | 90 | 14400 | < th | dose dependent | rect. | 24 | 4 |
| 479 | 31.00 | radiation | 30 | 43200 | > th | dose independent | rect. | 7 | 5 |
| 576 | 31.02 | radiation | 30 | 43200 | > th | dose independent | rect. | 10 | 22 |
| 592 | 31.03 | radiation | 30 | 43200 | > th | dose independent | rect. | 10 | 7 |
| 630 | 31.05 | radiation | 30 | 43200 | > th | dose independent | sin | 3 | NA |
| 748 | 31.10 | radiation | 30 | 43200 | > th | dose independent | no | NA | NA |
| 919 | 31.11 | radiation | 20 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 974 | 31.14 | radiation | 20 | 43200 | > th | dose dependent | rect. | 10 | 4 |