Os10g0415300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glutathione reductase (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os10g0415300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Glutathione reductase (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 126.95 | 0.529 | 5.7 | 0.615 | 0.889 | -1.74 | 0.817 | 4.02 | -0.0749 | 19.2 | 20.87 | 1351 | -- | -- |
| 134.3 | 0.54 | 5.8 | -0.0297 | 0.857 | -1.97 | 1.01 | -- | -0.207 | 18.8 | 15.21 | 8319 | -- | -- |
| 128.57 | 0.528 | 5.7 | 0.664 | 0.892 | -1.78 | -- | 4.25 | -0.0648 | 19.4 | 21 | 1321 | -- | -- |
| 135.16 | 0.541 | 5.78 | -0.00047 | 0.931 | -2.2 | -- | -- | -0.123 | 19.3 | 12.41 | 8161 | -- | -- |
| 170.6 | 0.608 | 5.68 | 0.566 | -- | -1.75 | -- | 3.9 | -0.0887 | -- | 20.9 | 1366 | -- | -- |
| 210.94 | 0.681 | 5.92 | -1.13 | 0.925 | -- | 1.05 | -- | -0.76 | 18.6 | -- | -- | -- | -- |
| 213.63 | 0.684 | 5.92 | -1.14 | 0.928 | -- | -- | -- | -0.758 | 18.8 | -- | -- | -- | -- |
| 177.4 | 0.62 | 5.75 | 0.0208 | -- | -2.22 | -- | -- | -0.115 | -- | 9.663 | 8561 | -- | -- |
| 135.12 | 0.541 | 5.78 | -- | 0.932 | -2.2 | -- | -- | -0.13 | 19.2 | 10.99 | 8161 | -- | -- |
| 258.67 | 0.752 | 5.9 | -1.17 | -- | -- | -- | -- | -0.776 | -- | -- | -- | -- | -- |
| 248.17 | 0.737 | 5.89 | -- | 0.942 | -- | -- | -- | -0.63 | 18.7 | -- | -- | -- | -- |
| 177.41 | 0.62 | 5.76 | -- | -- | -2.21 | -- | -- | -0.121 | -- | 9.792 | 8561 | -- | -- |
| 294.5 | 0.801 | 5.87 | -- | -- | -- | -- | -- | -0.646 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 125.21 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 11 | 125.47 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 12 | 125.65 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 13 | 125.78 | radiation | 1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 16 | 125.82 | radiation | 1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 25 | 126.47 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 26 | 126.47 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 18 |
| 32 | 126.57 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 36 | 126.59 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 47 | 126.64 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 61 | 126.69 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 69 | 126.72 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 72 | 126.74 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 80 | 126.78 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 81 | 126.78 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 89 | 126.81 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 111 | 126.89 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 161 | 127.10 | atmosphere | 1005 | 43200 | > th | dose dependent | sin | 5 | NA |
| 189 | 127.21 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 191 | 127.21 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 192 | 127.22 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 200 | 127.24 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 215 | 127.26 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 228 | 127.30 | temperature | 20 | 1440 | > th | dose dependent | sin | 15 | NA |
| 238 | 127.32 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 307 | 127.43 | temperature | 20 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 313 | 127.43 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 22 |
| 329 | 127.46 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 8 |
| 338 | 127.47 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 19 |
| 340 | 127.48 | temperature | 15 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 347 | 127.49 | temperature | 20 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 392 | 127.54 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 6 |
| 437 | 127.58 | atmosphere | 1005 | 43200 | > th | dose dependent | no | NA | NA |
| 448 | 127.59 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 11 | 23 |
| 466 | 127.62 | temperature | 15 | 43200 | > th | dose independent | rect. | 2 | 4 |
| 477 | 127.62 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 7 | 23 |
| 502 | 127.66 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 510 | 127.68 | radiation | 1 | 14400 | < th | dose dependent | sin | 9 | NA |
| 519 | 127.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 14 |
| 529 | 127.70 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 545 | 127.72 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 10 |
| 551 | 127.72 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 23 |
| 554 | 127.73 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 8 |
| 589 | 127.78 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 11 |
| 624 | 127.82 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 7 |
| 636 | 127.83 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 638 | 127.83 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 9 |
| 652 | 127.84 | radiation | 1 | 14400 | < th | dose dependent | rect. | 21 | 15 |
| 693 | 127.88 | temperature | 20 | 43200 | < th | dose dependent | rect. | 2 | 2 |
| 707 | 127.90 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 713 | 127.91 | temperature | 20 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 759 | 127.96 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 778 | 127.98 | temperature | 20 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 797 | 128.00 | temperature | 20 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 892 | 128.11 | atmosphere | 1005 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 896 | 128.12 | temperature | 20 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 986 | 128.24 | humidity | 90 | 43200 | > th | dose dependent | rect. | 8 | 3 |