BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0415300 Os10g0415300|AK108799
(387 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G54660.1 | chr3:20230356-20233100 REVERSE LENGTH=566 623 e-179
AT3G24170.1 | chr3:8729762-8734115 REVERSE LENGTH=500 356 1e-98
AT3G16950.2 | chr3:5786508-5790383 REVERSE LENGTH=624 142 3e-34
AT4G16155.1 | chr4:9153570-9157322 REVERSE LENGTH=631 141 6e-34
AT1G48030.1 | chr1:17717432-17719141 REVERSE LENGTH=508 128 6e-30
AT3G17240.1 | chr3:5890278-5892166 REVERSE LENGTH=508 122 3e-28
AT3G09940.1 | chr3:3056501-3059103 REVERSE LENGTH=442 57 2e-08
>AT3G54660.1 | chr3:20230356-20233100 REVERSE LENGTH=566
Length = 565
Score = 623 bits (1606), Expect = e-179, Method: Compositional matrix adjust.
Identities = 295/385 (76%), Positives = 338/385 (87%), Gaps = 1/385 (0%)
Query: 1 MTNKNLELQRLVGVQTNMLKNSGVTIIEGRGKVVDPHTVSVDGKLYTAKNILIAVGGRPS 60
+ NKN ELQRL G+ N+L + V +IEGRGKV+DPHTV VDGK+YT +NILIAVGGRP
Sbjct: 178 IANKNAELQRLTGIYKNILSKANVKLIEGRGKVIDPHTVDVDGKIYTTRNILIAVGGRPF 237
Query: 61 MPDIPGIEHVIDSDAALDLPSRPEKIAIVGGGYIALEFAGIFNGLKSGVHVFIRQKKVLR 120
+PDIPG E IDSDAALDLPS+P+KIAIVGGGYIALEFAGIFNGL VHVFIRQKKVLR
Sbjct: 238 IPDIPGKEFAIDSDAALDLPSKPKKIAIVGGGYIALEFAGIFNGLNCEVHVFIRQKKVLR 297
Query: 121 GFDEEVRDFVADQMSLRGITFHTEETPQAVMKSDDGLLTLTTNKGSINGFSHVMFATGRK 180
GFDE+VRDFV +QMSLRGI FHTEE+P+A++K+ DG +L T+KG++ GFSHVMFATGRK
Sbjct: 298 GFDEDVRDFVGEQMSLRGIEFHTEESPEAIIKAGDGSFSLKTSKGTVEGFSHVMFATGRK 357
Query: 181 PNTKNLGLEEVGVKMDKHGAIVVDEFSRTSVDSIWAVGDVTNRVNLTPVALMEGGALART 240
PNTKNLGLE VGVKM K+GAI VDE+S+TSV SIWAVGDVT+R+NLTPVALMEGGALA+T
Sbjct: 358 PNTKNLGLENVGVKMAKNGAIEVDEYSQTSVPSIWAVGDVTDRINLTPVALMEGGALAKT 417
Query: 241 IFGNEPTKPDYSAVPSAVFSQPPIGQVGLTEEKAIEKYGDVDVYTSNFRPLRATLSGLPD 300
+F NEPTKPDY AVP AVFSQPPIG VGLTEE+AIE+YGDVDVYTSNFRPL+ATLSGLPD
Sbjct: 418 LFQNEPTKPDYRAVPCAVFSQPPIGTVGLTEEQAIEQYGDVDVYTSNFRPLKATLSGLPD 477
Query: 301 RVYMKVIVCANTNKVLGVHVCGEDAPEIIQGIAIAVKAGLMKQNFDATIGVHPTTAEELV 360
RV+MK+IVCANTNKVLGVH+CGED+PEIIQG +AVKAGL K +FDAT+GVHPT AEE V
Sbjct: 478 RVFMKLIVCANTNKVLGVHMCGEDSPEIIQGFGVAVKAGLTKADFDATVGVHPTAAEEFV 537
Query: 361 TMRSPTRKVRRDAVDEAKMKDEATS 385
TMR+PTRK R+D+ E K EA +
Sbjct: 538 TMRAPTRKFRKDS-SEGKASPEAKT 561
>AT3G24170.1 | chr3:8729762-8734115 REVERSE LENGTH=500
Length = 499
Score = 356 bits (913), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 183/375 (48%), Positives = 254/375 (67%), Gaps = 7/375 (1%)
Query: 1 MTNKNLELQRLVGVQTNMLKNSGVTIIEGRGKVVDPHTVSV---DGK--LYTAKNILIAV 55
+ K E+ RL + +L N+ V + EG G+VV P+ V V DG YTAK+ILIA
Sbjct: 116 LQKKTDEILRLNNIYKRLLANAAVKLYEGEGRVVGPNEVEVRQIDGTKISYTAKHILIAT 175
Query: 56 GGRPSMPDIPGIEHVIDSDAALDLPSRPEKIAIVGGGYIALEFAGIFNGLKSGVHVFIRQ 115
G R P+IPG E I SD AL L P++ ++GGGYIA+EFA I+ G+ + V +F R+
Sbjct: 176 GSRAQKPNIPGHELAITSDEALSLEEFPKRAIVLGGGYIAVEFASIWRGMGATVDLFFRK 235
Query: 116 KKVLRGFDEEVRDFVADQMSLRGITFHTEETPQAVMKSDDGLLTLTTNKGSINGFSHVMF 175
+ LRGFD+E+R VA + RG+ H + + + K+D G+ ++++ G V+F
Sbjct: 236 ELPLRGFDDEMRALVARNLEGRGVNLHPQTSLTQLTKTDQGIKVISSH-GEEFVADVVLF 294
Query: 176 ATGRKPNTKNLGLEEVGVKMDKHGAIVVDEFSRTSVDSIWAVGDVTNRVNLTPVALMEGG 235
ATGR PNTK L LE VGV++D+ GA+ VDE+SRT++ SIWAVGD TNR+NLTPVALME
Sbjct: 295 ATGRSPNTKRLNLEAVGVELDQAGAVKVDEYSRTNIPSIWAVGDATNRINLTPVALMEAT 354
Query: 236 ALARTIFGNEPTKPDYSAVPSAVFSQPPIGQVGLTEEKAIEKY-GDVDVYTSNFRPLRAT 294
A T FG +PTK +YS V AVF PP+ VGL+EE+A+E+ GD+ V+TS F P++ T
Sbjct: 355 CFANTAFGGKPTKAEYSNVACAVFCIPPLAVVGLSEEEAVEQATGDILVFTSGFNPMKNT 414
Query: 295 LSGLPDRVYMKVIVCANTNKVLGVHVCGEDAPEIIQGIAIAVKAGLMKQNFDATIGVHPT 354
+SG ++ MK+IV ++KV+G +CG DA EI+QGIAIA+K G K FD+T+G+HP+
Sbjct: 415 ISGRQEKTLMKLIVDEKSDKVIGASMCGPDAAEIMQGIAIALKCGATKAQFDSTVGIHPS 474
Query: 355 TAEELVTMRSPTRKV 369
+AEE VTMRS TR++
Sbjct: 475 SAEEFVTMRSVTRRI 489
>AT3G16950.2 | chr3:5786508-5790383 REVERSE LENGTH=624
Length = 623
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 181/369 (49%), Gaps = 31/369 (8%)
Query: 16 TNMLKNSGVTIIEGRGKVVDPHTVSVDGK--LYTAKNILIAVGGRPSMPDIPGIE----H 69
TN +K GV I+ G G V+ P V GK + TAK+I+IA G P +P GIE
Sbjct: 184 TNSMKAIGVDILTGFGSVLGPQKVKY-GKDNIITAKDIIIATGSVPFVPK--GIEVDGKT 240
Query: 70 VIDSDAALDLPSRPEKIAIVGGGYIALEFAGIFNGLKSGVHVFIRQKKVLRGFDEEVRDF 129
VI SD AL L S PE IAIVG GYI LEF+ ++ L S V +++ GFD E+
Sbjct: 241 VITSDHALKLESVPEWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEISKL 300
Query: 130 VADQM-SLRGITFHTEETPQAVMKSDDG---LLTL----TTNKGSINGFSHVMFATGRKP 181
+ + R I +HT + + DG L+ L T + ATGR P
Sbjct: 301 AQRVLINPRKIDYHTGVFASKITPARDGKPVLIELIDAKTKEPKDTLEVDAALIATGRAP 360
Query: 182 NTKNLGLEEVGVKMDKHGAIVVDEFSR------TSVDSIWAVGDVTNRVNLTPVALMEGG 235
T LGLE V V + + G I VDE R T V +++ +GD ++ L A +G
Sbjct: 361 FTNGLGLENVNV-VTQRGFIPVDERMRVIDGKGTLVPNLYCIGDANGKLMLAHAASAQGI 419
Query: 236 ALARTIFGNEPTKPDYSAVPSAVFSQPPIGQVGLTEEKAIEKYGD-----VDVYTSNFRP 290
++ + G + ++ ++P+A F+ P I VGLTE +A EK G+ V V ++F+
Sbjct: 420 SVVEQVSGRDHVL-NHLSIPAACFTHPEISMVGLTEPQAKEK-GEKEGFKVSVVKTSFKA 477
Query: 291 LRATLSGLPDRVYMKVIVCANTNKVLGVHVCGEDAPEIIQGIAIAVKAGLMKQNFDATIG 350
L+ K+I + ++LGVH+ G A ++I + A+ G Q+ +
Sbjct: 478 NTKALAENEGEGIAKMIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKLAVH 537
Query: 351 VHPTTAEEL 359
HPT +E L
Sbjct: 538 AHPTLSEVL 546
>AT4G16155.1 | chr4:9153570-9157322 REVERSE LENGTH=631
Length = 630
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 172/364 (47%), Gaps = 26/364 (7%)
Query: 16 TNMLKNSGVTIIEGRGKVVDPHTVSVDGKLYTAKNILIAVGGRPSMPDIPGIE----HVI 71
TN +K GV I+ G G V+ P V + T K+I+IA G P +P GIE VI
Sbjct: 245 TNSMKALGVDILTGFGAVLGPQKVKYGDNIITGKDIIIATGSVPFVPK--GIEVDGKTVI 302
Query: 72 DSDAALDLPSRPEKIAIVGGGYIALEFAGIFNGLKSGVHVFIRQKKVLRGFDEEVRDFVA 131
SD AL L S P+ IAIVG GYI LEF+ ++ L S V +++ GFD E+
Sbjct: 303 TSDHALKLESVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEISKLAQ 362
Query: 132 DQM-SLRGITFHTEETPQAVMKSDDG---LLTL----TTNKGSINGFSHVMFATGRKPNT 183
+ + R I +HT + + DG L+ L T + ATGR P T
Sbjct: 363 RVLINTRKIDYHTGVFASKITPAKDGKPVLIELIDAKTKEPKDTLEVDAALIATGRAPFT 422
Query: 184 KNLGLEEVGVKMDKHGAIVVDEFSRT------SVDSIWAVGDVTNRVNLTPVALMEGGAL 237
LGLE + V + G I VDE R V ++ +GD ++ L A +G ++
Sbjct: 423 NGLGLENINVTTQR-GFIPVDERMRVIDGNGKLVPHLYCIGDANGKLMLAHAASAQGISV 481
Query: 238 ARTIFGNEPTKPDYSAVPSAVFSQPPIGQVGLTEEKAIEKYG----DVDVYTSNFRPLRA 293
+ G + ++ ++P+A F+ P I VGLTE +A EK V + ++F+
Sbjct: 482 VEQVTGRDHVL-NHLSIPAACFTHPEISMVGLTEPQAREKAEKEGFKVSIAKTSFKANTK 540
Query: 294 TLSGLPDRVYMKVIVCANTNKVLGVHVCGEDAPEIIQGIAIAVKAGLMKQNFDATIGVHP 353
L+ K+I + ++LGVH+ G A ++I + A+ G Q+ + HP
Sbjct: 541 ALAENEGEGLAKMIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKLAVHAHP 600
Query: 354 TTAE 357
T +E
Sbjct: 601 TLSE 604
>AT1G48030.1 | chr1:17717432-17719141 REVERSE LENGTH=508
Length = 507
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 173/357 (48%), Gaps = 20/357 (5%)
Query: 18 MLKNSGVTIIEGRGKVVDPHTVSVD-----GKLYTAKNILIAVGGRPSMPDIPGI----E 68
+ K + VT ++G GK + P+ VSV+ + K+I++A G + +PGI +
Sbjct: 142 LFKKNKVTYVKGYGKFISPNEVSVETIDGGNTIVKGKHIIVATGS--DVKSLPGITIDEK 199
Query: 69 HVIDSDAALDLPSRPEKIAIVGGGYIALEFAGIFNGLKSGVHVFIRQKKVLRGFDEEVRD 128
++ S AL L P+K+ ++G GYI LE ++ L S V V ++ D E+R
Sbjct: 200 KIVSSTGALSLSEVPKKLIVIGAGYIGLEMGSVWGRLGSEVTVVEFAGDIVPSMDGEIRK 259
Query: 129 FVADQMSLRGITFHTEETPQAVMKSDDGL-LTLTTNKG---SINGFSHVMFATGRKPNTK 184
+ + + F + +V S DG+ LT+ +G SI V+ + GR P T
Sbjct: 260 QFQRSLEKQKMKFMLKTKVVSVDSSSDGVKLTVEPAEGGEQSILEADVVLVSAGRTPFTS 319
Query: 185 NLGLEEVGVKMDKHGAIVVDEFSRTSVDSIWAVGDVTNRVNLTPVALMEGGALARTIFGN 244
L LE++GV+ DK G I+V++ ++V ++A+GDV L A +G A I G
Sbjct: 320 GLDLEKIGVETDKAGRILVNDRFLSNVPGVYAIGDVIPGPMLAHKAEEDGVACVEFIAGK 379
Query: 245 EPTKPDYSAVPSAVFSQPPIGQVGLTEEKAIEKYGDVDVYTSNFRPLRATLSGLPDRV-- 302
DY VP V++ P + VG TEE+ ++K G V F + + + D
Sbjct: 380 H-GHVDYDKVPGVVYTHPEVASVGKTEEQ-LKKEG-VSYRVGKFPFMANSRAKAIDNAEG 436
Query: 303 YMKVIVCANTNKVLGVHVCGEDAPEIIQGIAIAVKAGLMKQNFDATIGVHPTTAEEL 359
+K++ T+K+LGVH+ +A E+I +A+ ++ HPT +E L
Sbjct: 437 LVKILADKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEAL 493
>AT3G17240.1 | chr3:5890278-5892166 REVERSE LENGTH=508
Length = 507
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 171/374 (45%), Gaps = 20/374 (5%)
Query: 1 MTNKNLELQRLVGVQTNMLKNSGVTIIEGRGKVVDPHTVSVD-----GKLYTAKNILIAV 55
+ K+ ++ L + K + V ++G GK + P VSVD + K+I++A
Sbjct: 125 LAQKDTAVKNLTRGVEGLFKKNKVNYVKGYGKFLSPSEVSVDTIDGENVVVKGKHIIVAT 184
Query: 56 GGRPSMPDIPGI----EHVIDSDAALDLPSRPEKIAIVGGGYIALEFAGIFNGLKSGVHV 111
G + +PGI + ++ S AL L P+K+ ++G GYI LE ++ L S V V
Sbjct: 185 G--SDVKSLPGITIDEKKIVSSTGALSLTEIPKKLIVIGAGYIGLEMGSVWGRLGSEVTV 242
Query: 112 FIRQKKVLRGFDEEVRDFVADQMSLRGITFHTEETPQAVMKSDDG--LLTLTTNKGSING 169
++ D E+R + + + F + V S DG L+ G
Sbjct: 243 VEFAADIVPAMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDSSGDGVKLIVEPAEGGEQTT 302
Query: 170 FSH--VMFATGRKPNTKNLGLEEVGVKMDKHGAIVVDEFSRTSVDSIWAVGDVTNRVNLT 227
V+ + GR P T L LE++GV+ DK G I+V+E T+V ++A+GDV L
Sbjct: 303 LEADVVLVSAGRTPFTSGLDLEKIGVETDKGGRILVNERFSTNVSGVYAIGDVIPGPMLA 362
Query: 228 PVALMEGGALARTIFGNEPTKPDYSAVPSAVFSQPPIGQVGLTEEKAIEKYGDVDVYTSN 287
A +G A I G DY VP V++ P + VG TEE+ ++K G V
Sbjct: 363 HKAEEDGVACVEFIAGKH-GHVDYDKVPGVVYTYPEVASVGKTEEQ-LKKEG-VSYNVGK 419
Query: 288 FRPLRATLSGLPDRV--YMKVIVCANTNKVLGVHVCGEDAPEIIQGIAIAVKAGLMKQNF 345
F + + + D +K++ T+K+LGVH+ +A E+I +A+ ++
Sbjct: 420 FPFMANSRAKAIDTAEGMVKILADKETDKILGVHIMSPNAGELIHEAVLAINYDASSEDI 479
Query: 346 DATIGVHPTTAEEL 359
HPT +E +
Sbjct: 480 ARVCHAHPTMSEAI 493
>AT3G09940.1 | chr3:3056501-3059103 REVERSE LENGTH=442
Length = 441
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 108/274 (39%), Gaps = 42/274 (15%)
Query: 17 NMLKNSGVTIIEG----RGKVVDPHTVSVDGKLYTAKNILIAVGG-----------RPSM 61
N K G+ +I G + + VS DGK+Y + +LIA G +
Sbjct: 81 NWYKEKGIDLIVGTEIVKADLASKTLVSDDGKIYKYQTLLIATGSTNIRLSEIGVQEADV 140
Query: 62 PDIPGIEHVIDSDA---ALDLPSRPEKIAIVGGGYIALEFAGIFNGLKSGVH----VFIR 114
+I + + DSD A++L + K I+GGG++ LE I + L++ H VF
Sbjct: 141 KNIFYLREIEDSDELALAMELYVQRGKAVIIGGGFLGLE---ISSALRANNHEVTMVFPE 197
Query: 115 QKKVLRGFDEEVRDFVADQMSLRGITFHTEETPQAVMKSDDGLLT-LTTNKGSINGFSHV 173
V R F E+ F + +GI + DG +T + G + V
Sbjct: 198 PWLVHRFFTAEIASFYESYYANKGIKIIKGTVATGFSTNSDGEVTEVKLEDGRTLEANIV 257
Query: 174 MFATGRKPNTKNLGLEEVGVKMDKHGAIVVDEFSRTSVDSIWAVGDV----------TNR 223
+ G +P T G ++ G I D F +TSV ++A+GDV T R
Sbjct: 258 VAGVGARPATSLFK----GQLEEEKGGIKTDGFFKTSVPDVYALGDVATFPMKMYGGTRR 313
Query: 224 VNLTPVALMEGGALARTIFGNEPTK--PDYSAVP 255
V A + I E K PDY +P
Sbjct: 314 VEHADNARKSAAQAVKAIKAGEEGKTIPDYDYLP 347
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.135 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,294,240
Number of extensions: 362275
Number of successful extensions: 988
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 969
Number of HSP's successfully gapped: 8
Length of query: 387
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 287
Effective length of database: 8,364,969
Effective search space: 2400746103
Effective search space used: 2400746103
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 113 (48.1 bits)