Os01g0328700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Dihydrolipoamide dehydrogenase family protein.
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Os01g0328700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Dihydrolipoamide dehydrogenase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.7 | 0.392 | 14.2 | -1.17 | 1.59 | 1.02 | -0.0443 | 0.715 | -0.657 | 23.6 | 23.87 | 611 | -- | -- |
| 70.39 | 0.391 | 14.2 | -1.1 | 1.56 | 0.933 | -0.166 | -- | -0.644 | 23.5 | 24.04 | 547 | -- | -- |
| 69.58 | 0.389 | 14.3 | -1.19 | 1.57 | 1.1 | -- | 0.898 | -0.672 | 23.6 | 23.2 | 523 | -- | -- |
| 70.38 | 0.391 | 14.2 | -1.09 | 1.56 | 0.928 | -- | -- | -0.64 | 23.5 | 24 | 526 | -- | -- |
| 156.98 | 0.584 | 14.2 | -0.776 | -- | 2.19 | -- | -0.873 | -0.464 | -- | 37.45 | 2 | -- | -- |
| 82.26 | 0.425 | 14.3 | -1.31 | 1.51 | -- | -0.0981 | -- | -0.807 | 23.7 | -- | -- | -- | -- |
| 82.31 | 0.425 | 14.3 | -1.31 | 1.51 | -- | -- | -- | -0.806 | 23.8 | -- | -- | -- | -- |
| 155.37 | 0.583 | 14.2 | -0.859 | -- | 1.86 | -- | -- | -0.451 | -- | 30.28 | 8 | -- | -- |
| 82.85 | 0.424 | 14.2 | -- | 1.47 | 1.18 | -- | -- | -0.474 | 23.7 | 20.11 | 31889 | -- | -- |
| 225.64 | 0.702 | 14.2 | -1.27 | -- | -- | -- | -- | -0.788 | -- | -- | -- | -- | -- |
| 127.51 | 0.528 | 14.2 | -- | 1.49 | -- | -- | -- | -0.66 | 23.7 | -- | -- | -- | -- |
| 173.47 | 0.615 | 14.1 | -- | -- | 2.09 | -- | -- | -0.315 | -- | 30.1 | 8 | -- | -- |
| 267.9 | 0.764 | 14.2 | -- | -- | -- | -- | -- | -0.647 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.67 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 14 |
| 4 | 66.47 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 22 |
| 21 | 68.13 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 12 | 19 |
| 22 | 68.15 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 6 |
| 29 | 68.35 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 14 |
| 33 | 68.43 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 35 | 68.53 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 1 | 17 |
| 61 | 69.04 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 65 | 69.12 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 3 | 2 |
| 71 | 69.17 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 75 | 69.20 | temperature | 20.0 | 270 | > th | dose independent | rect. | 10 | 21 |
| 79 | 69.24 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 7 | 21 |
| 82 | 69.26 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 10 | 22 |
| 89 | 69.34 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 90 | 69.37 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 92 | 69.38 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 101 | 69.47 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 20 |
| 102 | 69.47 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 106 | 69.48 | temperature | 20.0 | 90 | > th | dose independent | rect. | 12 | 19 |
| 117 | 69.55 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 7 | 12 |
| 138 | 69.71 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 176 | 69.92 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 24 | 22 |
| 177 | 69.93 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 179 | 69.93 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 184 | 69.94 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 188 | 69.96 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 7 |
| 202 | 69.99 | temperature | 10.0 | 270 | > th | dose dependent | sin | 4 | NA |
| 211 | 70.01 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 212 | 70.02 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 7 | 16 |
| 224 | 70.04 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 226 | 70.05 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 23 | 4 |
| 229 | 70.07 | temperature | 25.0 | 720 | < th | dose dependent | sin | 9 | NA |
| 250 | 70.15 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 1 | 15 |
| 260 | 70.20 | wind | 5.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 304 | 70.30 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 22 | 22 |
| 312 | 70.33 | temperature | 10.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 313 | 70.33 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 318 | 70.34 | wind | 5.0 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 326 | 70.36 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 14 |
| 342 | 70.39 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 344 | 70.40 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 353 | 70.42 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 7 | 6 |
| 357 | 70.42 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 1 | 21 |
| 359 | 70.42 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 7 | 23 |
| 369 | 70.45 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 375 | 70.46 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 388 | 70.48 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 406 | 70.55 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 449 | 70.63 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 18 | 19 |
| 462 | 70.67 | temperature | 10.0 | 270 | > th | dose dependent | sin | 1 | NA |
| 492 | 70.71 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 7 |
| 507 | 70.74 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 560 | 70.87 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 6 |
| 562 | 70.87 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 575 | 70.88 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 16 | 21 |
| 587 | 70.90 | temperature | 25.0 | 270 | < th | dose dependent | sin | 1 | NA |
| 606 | 70.93 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 2 |
| 631 | 70.97 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 632 | 70.97 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 644 | 70.99 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 12 |
| 651 | 71.00 | temperature | 15.0 | 270 | > th | dose dependent | no | NA | NA |
| 672 | 71.03 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 673 | 71.03 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 681 | 71.04 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 797 | 71.23 | humidity | 50.0 | 270 | > th | dose independent | rect. | 15 | 10 |
| 800 | 71.23 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 4 |
| 801 | 71.23 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 8 | 5 |
| 802 | 71.23 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 828 | 71.26 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 829 | 71.27 | temperature | 20.0 | 30 | > th | dose independent | rect. | 1 | 17 |
| 839 | 71.28 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 9 |
| 854 | 71.30 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 877 | 71.33 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 882 | 71.33 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 912 | 71.37 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 913 | 71.37 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 928 | 71.39 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 20 |
| 944 | 71.41 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 957 | 71.43 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 970 | 71.46 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 12 | 10 |
| 985 | 71.49 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 7 |
| 992 | 71.50 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |