Os03g0163300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glutathione reductase (Fragment).
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Os03g0163300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glutathione reductase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.01 | 0.348 | 10.8 | -0.681 | 0.397 | 0.914 | 0.186 | 0.932 | -0.64 | 19.7 | 25.43 | 10 | -- | -- |
| 55.25 | 0.349 | 10.8 | -0.777 | 0.405 | 0.987 | 0.187 | -- | -0.661 | 19.7 | 25.5 | 13 | -- | -- |
| 54.98 | 0.348 | 10.8 | -0.68 | 0.405 | 0.918 | -- | 0.982 | -0.634 | 19.5 | 25.5 | 7 | -- | -- |
| 55.34 | 0.349 | 10.8 | -0.781 | 0.405 | 1 | -- | -- | -0.66 | 19.7 | 25.5 | 10 | -- | -- |
| 61.49 | 0.365 | 10.8 | -0.702 | -- | 0.986 | -- | 0.826 | -0.691 | -- | 24.2 | 118 | -- | -- |
| 69.74 | 0.392 | 10.8 | -0.637 | 0.62 | -- | 0.3 | -- | -0.604 | 17.4 | -- | -- | -- | -- |
| 69.96 | 0.392 | 10.8 | -0.638 | 0.622 | -- | -- | -- | -0.603 | 17.4 | -- | -- | -- | -- |
| 61.72 | 0.366 | 10.8 | -0.819 | -- | 1.04 | -- | -- | -0.72 | -- | 24.2 | 113 | -- | -- |
| 70.76 | 0.394 | 10.8 | -- | 0.461 | 0.838 | -- | -- | -0.536 | 18.6 | 26.66 | 3 | -- | -- |
| 90.12 | 0.444 | 10.8 | -0.659 | -- | -- | -- | -- | -0.618 | -- | -- | -- | -- | -- |
| 80.69 | 0.42 | 10.8 | -- | 0.633 | -- | -- | -- | -0.532 | 17.4 | -- | -- | -- | -- |
| 79.03 | 0.414 | 10.8 | -- | -- | 0.915 | -- | -- | -0.611 | -- | 24.48 | 118 | -- | -- |
| 101.57 | 0.47 | 10.8 | -- | -- | -- | -- | -- | -0.545 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.63 | temperature | 25 | 270 | > th | dose dependent | sin | 7 | NA |
| 4 | 51.40 | temperature | 25 | 270 | > th | dose dependent | rect. | 19 | 19 |
| 5 | 51.48 | temperature | 25 | 90 | > th | dose dependent | sin | 3 | NA |
| 30 | 52.87 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 9 |
| 51 | 53.23 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 58 | 53.37 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 11 |
| 87 | 53.73 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 127 | 54.01 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 181 | 54.47 | temperature | 30 | 270 | < th | dose independent | rect. | 2 | 13 |
| 205 | 54.62 | temperature | 10 | 10 | > th | dose dependent | sin | 0 | NA |
| 249 | 54.91 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 268 | 55.06 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 286 | 55.17 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 290 | 55.19 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 291 | 55.19 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 301 | 55.23 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 326 | 55.35 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 18 |
| 328 | 55.36 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 329 | 55.36 | temperature | 30 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 368 | 55.47 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 389 | 55.53 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 416 | 55.57 | temperature | 30 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 462 | 55.74 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 500 | 55.89 | temperature | 30 | 90 | > th | dose independent | sin | 3 | NA |
| 511 | 55.92 | temperature | 30 | 90 | < th | dose independent | sin | 3 | NA |
| 604 | 56.22 | temperature | 30 | 90 | > th | dose independent | rect. | 8 | 7 |
| 624 | 56.24 | temperature | 25 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 707 | 56.49 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 712 | 56.52 | radiation | 40 | 270 | < th | dose independent | rect. | 9 | 22 |
| 741 | 56.60 | humidity | 60 | 10 | > th | dose dependent | sin | 0 | NA |
| 778 | 56.68 | temperature | 30 | 30 | < th | dose dependent | sin | 0 | NA |
| 797 | 56.72 | temperature | 30 | 270 | < th | dose independent | sin | 6 | NA |
| 869 | 56.96 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 906 | 57.09 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 975 | 57.28 | radiation | 1 | 270 | > th | dose dependent | sin | 5 | NA |
| 977 | 57.28 | temperature | 25 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 987 | 57.34 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 5 | 18 |