BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0322300 Os01g0322300|Os01g0322300
(65 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0322300 Inorganic pyrophosphatase family protein 136 4e-33
Os04g0687100 Similar to Soluble inorganic pyrophosphatase (... 110 2e-25
Os05g0438500 Similar to Soluble inorganic pyrophosphatase (... 97 2e-21
Os01g0866500 Similar to Soluble inorganic pyrophosphatase (... 97 3e-21
Os10g0406100 Similar to PRLI-interacting factor F (Fragment) 89 9e-19
Os05g0114000 Similar to PRLI-interacting factor F (Fragment) 88 1e-18
Os02g0704900 Similar to Inorganic pyrophosphatase-like protein 86 6e-18
>Os01g0322300 Inorganic pyrophosphatase family protein
Length = 65
Score = 136 bits (342), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 65/65 (100%), Positives = 65/65 (100%)
Query: 1 MPVCADDPEHCHYNDINELSPHCLQEIQRLFEDYKKNEKKKVVADAFLPVNTARDAIQYS 60
MPVCADDPEHCHYNDINELSPHCLQEIQRLFEDYKKNEKKKVVADAFLPVNTARDAIQYS
Sbjct: 1 MPVCADDPEHCHYNDINELSPHCLQEIQRLFEDYKKNEKKKVVADAFLPVNTARDAIQYS 60
Query: 61 IDLYA 65
IDLYA
Sbjct: 61 IDLYA 65
>Os04g0687100 Similar to Soluble inorganic pyrophosphatase (EC 3.6.1.1)
(Pyrophosphate phospho- hydrolase) (PPase)
Length = 213
Score = 110 bits (275), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/63 (80%), Positives = 56/63 (88%)
Query: 3 VCADDPEHCHYNDINELSPHCLQEIQRLFEDYKKNEKKKVVADAFLPVNTARDAIQYSID 62
VCADDPE+ HYNDI+ELSPH LQEI+R FEDYKKNE K+V DAFLP NTARDAIQYS+D
Sbjct: 142 VCADDPEYRHYNDISELSPHRLQEIKRFFEDYKKNENKEVAVDAFLPANTARDAIQYSMD 201
Query: 63 LYA 65
LYA
Sbjct: 202 LYA 204
>Os05g0438500 Similar to Soluble inorganic pyrophosphatase (EC 3.6.1.1)
(Pyrophosphate phospho- hydrolase) (PPase)
Length = 224
Score = 97.4 bits (241), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 54/63 (85%)
Query: 3 VCADDPEHCHYNDINELSPHCLQEIQRLFEDYKKNEKKKVVADAFLPVNTARDAIQYSID 62
VCADDPE+ H+N+++ELSPH LQEI+R FEDYKKNE K+V + FLP TAR+AIQYS+D
Sbjct: 153 VCADDPEYRHFNNLSELSPHRLQEIRRFFEDYKKNENKEVAVNDFLPAPTAREAIQYSMD 212
Query: 63 LYA 65
LYA
Sbjct: 213 LYA 215
>Os01g0866500 Similar to Soluble inorganic pyrophosphatase (EC 3.6.1.1)
(Pyrophosphate phospho- hydrolase) (PPase)
Length = 212
Score = 97.1 bits (240), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 52/63 (82%)
Query: 3 VCADDPEHCHYNDINELSPHCLQEIQRLFEDYKKNEKKKVVADAFLPVNTARDAIQYSID 62
VC DDPE+ HYND++ELSPH +QEI+R FEDYKKNE K+V + LPV ARDAIQYS+D
Sbjct: 142 VCVDDPEYRHYNDLSELSPHRVQEIRRFFEDYKKNENKEVAVNEVLPVTAARDAIQYSMD 201
Query: 63 LYA 65
LYA
Sbjct: 202 LYA 204
>Os10g0406100 Similar to PRLI-interacting factor F (Fragment)
Length = 204
Score = 88.6 bits (218), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 50/63 (79%)
Query: 3 VCADDPEHCHYNDINELSPHCLQEIQRLFEDYKKNEKKKVVADAFLPVNTARDAIQYSID 62
VC DDPE H+ND+ ELSPH L EI+R FEDYKKNE K+V + FLP TA++AI+YS+D
Sbjct: 133 VCVDDPEFRHFNDLKELSPHRLAEIRRFFEDYKKNENKEVAVNDFLPPATAQEAIKYSMD 192
Query: 63 LYA 65
LYA
Sbjct: 193 LYA 195
>Os05g0114000 Similar to PRLI-interacting factor F (Fragment)
Length = 216
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 50/63 (79%)
Query: 3 VCADDPEHCHYNDINELSPHCLQEIQRLFEDYKKNEKKKVVADAFLPVNTARDAIQYSID 62
VCADDPE+ HYNDI EL PH L EI+R FEDYKKNE K+V + FLP + A +AI++S+D
Sbjct: 145 VCADDPEYKHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASAAYEAIKHSMD 204
Query: 63 LYA 65
LYA
Sbjct: 205 LYA 207
>Os02g0704900 Similar to Inorganic pyrophosphatase-like protein
Length = 214
Score = 85.9 bits (211), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%)
Query: 3 VCADDPEHCHYNDINELSPHCLQEIQRLFEDYKKNEKKKVVADAFLPVNTARDAIQYSID 62
VCADDPE+ H+ DI E+ PH LQEI+R FEDYKKNE K+V + FLP A +AI+YS+D
Sbjct: 143 VCADDPEYRHFRDIKEIPPHRLQEIRRFFEDYKKNENKEVAVNEFLPAEDAINAIKYSMD 202
Query: 63 LYA 65
LY
Sbjct: 203 LYG 205
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.136 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 2,112,351
Number of extensions: 63018
Number of successful extensions: 150
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 150
Number of HSP's successfully gapped: 7
Length of query: 65
Length of database: 17,035,801
Length adjustment: 37
Effective length of query: 28
Effective length of database: 15,103,883
Effective search space: 422908724
Effective search space used: 422908724
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 149 (62.0 bits)