BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0315600 Os01g0315600|AK110785
(158 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0315600 Conserved hypothetical protein 329 5e-91
Os05g0363100 Alpha/beta hydrolase family protein 173 4e-44
Os12g0262700 Alpha/beta hydrolase family protein 127 2e-30
Os12g0100500 Alpha/beta hydrolase family protein 104 3e-23
Os11g0100600 Alpha/beta hydrolase family protein 104 3e-23
Os10g0135600 Alpha/beta hydrolase family protein 83 8e-17
Os01g0688200 Alpha/beta hydrolase family protein 79 2e-15
>Os01g0315600 Conserved hypothetical protein
Length = 158
Score = 329 bits (844), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 158/158 (100%), Positives = 158/158 (100%)
Query: 1 MEVEYHEEYVRNSRGVQLFTCGWLPAKTSPKALVFLCHGYAMECSGYMRECGMRLAAAGY 60
MEVEYHEEYVRNSRGVQLFTCGWLPAKTSPKALVFLCHGYAMECSGYMRECGMRLAAAGY
Sbjct: 1 MEVEYHEEYVRNSRGVQLFTCGWLPAKTSPKALVFLCHGYAMECSGYMRECGMRLAAAGY 60
Query: 61 GVFGMDYEGHGKSMGARCYIRSFRRLVDDCHRFFKSICGKQQNLYPFFITSLFNLSAYFT 120
GVFGMDYEGHGKSMGARCYIRSFRRLVDDCHRFFKSICGKQQNLYPFFITSLFNLSAYFT
Sbjct: 61 GVFGMDYEGHGKSMGARCYIRSFRRLVDDCHRFFKSICGKQQNLYPFFITSLFNLSAYFT 120
Query: 121 FSYTISVHYQARLCLCVAMQCFNLAAVYCTSVLALVMT 158
FSYTISVHYQARLCLCVAMQCFNLAAVYCTSVLALVMT
Sbjct: 121 FSYTISVHYQARLCLCVAMQCFNLAAVYCTSVLALVMT 158
>Os05g0363100 Alpha/beta hydrolase family protein
Length = 351
Score = 173 bits (439), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 74/97 (76%), Positives = 85/97 (87%)
Query: 2 EVEYHEEYVRNSRGVQLFTCGWLPAKTSPKALVFLCHGYAMECSGYMRECGMRLAAAGYG 61
+VEYHEE+V N RG++LFTCGWLPA +SPKAL+FLCHGY ME SG+M+ CG+ LA AGYG
Sbjct: 8 DVEYHEEFVTNPRGLRLFTCGWLPASSSPKALIFLCHGYGMEVSGFMKACGVELATAGYG 67
Query: 62 VFGMDYEGHGKSMGARCYIRSFRRLVDDCHRFFKSIC 98
VFG+DYEGHGKSMGARCYI+ F LVDDC RFFKSIC
Sbjct: 68 VFGIDYEGHGKSMGARCYIQKFEHLVDDCDRFFKSIC 104
>Os12g0262700 Alpha/beta hydrolase family protein
Length = 296
Score = 127 bits (320), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 71/99 (71%)
Query: 4 EYHEEYVRNSRGVQLFTCGWLPAKTSPKALVFLCHGYAMECSGYMRECGMRLAAAGYGVF 63
+YHEEYV N RG++LF C W P PKAL+FLCHGYAMECS MR G+RLA AG+ V
Sbjct: 7 KYHEEYVTNKRGMKLFACQWSPLDHEPKALIFLCHGYAMECSISMRGTGVRLAKAGFTVH 66
Query: 64 GMDYEGHGKSMGARCYIRSFRRLVDDCHRFFKSICGKQQ 102
G+DY+GHGKS G + YI SF +V DC +F S+C + +
Sbjct: 67 GLDYQGHGKSEGLQGYINSFDDVVVDCSNYFASVCERGE 105
>Os12g0100500 Alpha/beta hydrolase family protein
Length = 332
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Query: 4 EYHEEYVRNSRGVQLFTCGWLPAKTSPKALVFLCHGYAMECSGYMRECGMRLAAAGYGVF 63
Y E++V NSRG++LFTC W+P K S + +V LCHGYA+ECS MR RLA AGY V
Sbjct: 13 NYSEDWVVNSRGMRLFTCAWIP-KESSRGVVCLCHGYAVECSVTMRGTAERLARAGYAVH 71
Query: 64 GMDYEGHGKSMGARCYIRSFRRLVDDCHRFFKS 96
G+DYEGHG S G + Y+ LV DC FF +
Sbjct: 72 GIDYEGHGHSDGLQGYVPDLDALVRDCDSFFST 104
>Os11g0100600 Alpha/beta hydrolase family protein
Length = 332
Score = 104 bits (259), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Query: 4 EYHEEYVRNSRGVQLFTCGWLPAKTSPKALVFLCHGYAMECSGYMRECGMRLAAAGYGVF 63
Y E++V NSRG++LFTC W+P K S + +V LCHGYA+ECS MR RLA AGY V
Sbjct: 13 NYSEDWVVNSRGMRLFTCAWIP-KESSRGVVCLCHGYAVECSVTMRGTAERLARAGYAVH 71
Query: 64 GMDYEGHGKSMGARCYIRSFRRLVDDCHRFFKS 96
G+DYEGHG S G + Y+ LV DC FF +
Sbjct: 72 GIDYEGHGHSDGLQGYVPDLDALVRDCDSFFST 104
>Os10g0135600 Alpha/beta hydrolase family protein
Length = 369
Score = 83.2 bits (204), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%)
Query: 2 EVEYHEEYVRNSRGVQLFTCGWLPAKTSPKALVFLCHGYAMECSGYMRECGMRLAAAGYG 61
++ E Y +NSRGV++F+ W P KA+V LCHGY C+ ++ ++A+AGYG
Sbjct: 74 DIGTKESYEKNSRGVEIFSKCWYPENHRIKAIVCLCHGYGDTCTFFLDGIARKIASAGYG 133
Query: 62 VFGMDYEGHGKSMGARCYIRSFRRLVDDCHRFFKSI 97
VF +DY G G S G +I SF LVDD F +
Sbjct: 134 VFALDYPGFGLSEGLHGFIPSFDTLVDDVAEHFTKV 169
>Os01g0688200 Alpha/beta hydrolase family protein
Length = 294
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 3 VEYHEEYVRNSRGVQLFTCGWLPAK-TSPKALVFLCHGYAMECSGYMRECGMRLAAAGYG 61
++ E + NS+GV++F WLP + T+ KA +F CHGY C+ + R+AAAGY
Sbjct: 6 IQMEENFETNSKGVEIFWKSWLPREGTATKAALFFCHGYGDTCTFFFEGIAKRIAAAGYA 65
Query: 62 VFGMDYEGHGKSMGARCYIRSFRRLVDDCHRFFKSICGKQQ 102
V+ MDY G G S G YI SF +V+ + I G+++
Sbjct: 66 VYAMDYPGFGLSYGLHGYIASFDGMVEHVIEQYSRIKGRKE 106
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.332 0.141 0.466
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,245,832
Number of extensions: 200170
Number of successful extensions: 582
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 578
Number of HSP's successfully gapped: 7
Length of query: 158
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 65
Effective length of database: 12,179,899
Effective search space: 791693435
Effective search space used: 791693435
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 152 (63.2 bits)