Os10g0135600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Alpha/beta hydrolase family protein.
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Os10g0135600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Alpha/beta hydrolase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 112.73 | 0.499 | 11 | 1.37 | 1.06 | -0.66 | -0.221 | 1.23 | 0.83 | 15.3 | 21.64 | 11906 | -- | -- |
| 113.07 | 0.495 | 11 | 1.3 | 1.03 | -0.755 | -0.394 | -- | 0.753 | 15.2 | 18.69 | 28644 | -- | -- |
| 111.89 | 0.493 | 10.9 | 1.6 | 1.05 | -0.704 | -- | 1.36 | 0.878 | 15.2 | 22.11 | 27551 | -- | -- |
| 112.91 | 0.495 | 11 | 1.39 | 1.03 | -0.856 | -- | -- | 0.778 | 15.3 | 17.66 | 27092 | -- | -- |
| 173.44 | 0.613 | 10.9 | 1.72 | -- | -0.763 | -- | 1.33 | 0.91 | -- | 21.95 | 32883 | -- | -- |
| 125.06 | 0.524 | 11.1 | 0.583 | 1.07 | -- | -0.174 | -- | 0.412 | 15.3 | -- | -- | -- | -- |
| 125.16 | 0.524 | 11.1 | 0.579 | 1.07 | -- | -- | -- | 0.411 | 15.2 | -- | -- | -- | -- |
| 173.52 | 0.614 | 11 | 1.45 | -- | -0.94 | -- | -- | 0.785 | -- | 17.85 | 27044 | -- | -- |
| 131.51 | 0.534 | 11.1 | -- | 1.02 | -0.365 | -- | -- | 0.399 | 15.3 | 13.87 | 1237 | -- | -- |
| 189.6 | 0.643 | 11.1 | 0.534 | -- | -- | -- | -- | 0.383 | -- | -- | -- | -- | -- |
| 134.01 | 0.542 | 11.1 | -- | 1.05 | -- | -- | -- | 0.347 | 15.2 | -- | -- | -- | -- |
| 180.48 | 0.628 | 11.1 | -- | -- | 0.802 | -- | -- | 0.236 | -- | 23.42 | 1163 | -- | -- |
| 197.13 | 0.655 | 11.1 | -- | -- | -- | -- | -- | 0.324 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 102.01 | radiation | 10 | 10 | > th | dose independent | rect. | 6 | 1 |
| 27 | 102.01 | radiation | 10 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 57 | 109.90 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 58 | 109.91 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 19 |
| 59 | 109.92 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 60 | 109.92 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 11 |
| 65 | 109.92 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 19 |
| 125 | 110.15 | temperature | 30 | 14400 | < th | dose independent | sin | 14 | NA |
| 130 | 110.16 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 4 |
| 149 | 110.19 | temperature | 30 | 14400 | > th | dose independent | sin | 14 | NA |
| 208 | 110.29 | temperature | 25 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 306 | 110.58 | temperature | 25 | 14400 | > th | dose dependent | sin | 14 | NA |
| 360 | 110.68 | temperature | 25 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 417 | 110.76 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 463 | 110.84 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 16 |
| 489 | 110.84 | temperature | 30 | 14400 | < th | dose independent | rect. | 23 | 22 |
| 498 | 110.85 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 588 | 110.88 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 756 | 110.96 | wind | 3 | 30 | < th | dose dependent | rect. | 6 | 1 |
| 883 | 111.07 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 933 | 111.14 | temperature | 30 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 990 | 111.28 | temperature | 25 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 991 | 111.28 | temperature | 25 | 14400 | < th | dose independent | rect. | 18 | 6 |