Os12g0262700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Alpha/beta hydrolase family protein.
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Os12g0262700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Alpha/beta hydrolase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 132.01 | 0.54 | 3.06 | -0.625 | 0.164 | 0.989 | 0.0871 | -8.8 | 0.0672 | 13.1 | 30.5 | 14 | -- | -- |
| 138.6 | 0.553 | 3.01 | -0.0528 | 0.212 | -0.242 | 0.0831 | -- | 0.0458 | 13.5 | 31.8 | 30 | -- | -- |
| 131.99 | 0.539 | 3.06 | -0.6 | 0.163 | 0.998 | -- | -8.78 | 0.0681 | 13.1 | 30.71 | 14 | -- | -- |
| 138.5 | 0.548 | 3.01 | -0.048 | 0.216 | -0.262 | -- | -- | 0.0447 | 13.6 | 32 | 57 | -- | -- |
| 133.55 | 0.541 | 3.06 | -0.613 | -- | 1.06 | -- | -8.82 | 0.069 | -- | 30.74 | 14 | -- | -- |
| 139.49 | 0.554 | 3.01 | -0.0674 | 0.186 | -- | 0.0348 | -- | 0.0554 | 13.1 | -- | -- | -- | -- |
| 139.49 | 0.553 | 3.01 | -0.0661 | 0.186 | -- | -- | -- | 0.0556 | 13.1 | -- | -- | -- | -- |
| 140.67 | 0.555 | 3.01 | -0.0888 | -- | 0.192 | -- | -- | 0.0658 | -- | 30.74 | 14 | -- | -- |
| 138.56 | 0.548 | 3.01 | -- | 0.216 | -0.265 | -- | -- | 0.0496 | 13.7 | 32.09 | 57 | -- | -- |
| 141.64 | 0.556 | 3.01 | -0.0733 | -- | -- | -- | -- | 0.0519 | -- | -- | -- | -- | -- |
| 139.61 | 0.553 | 3.01 | -- | 0.187 | -- | -- | -- | 0.063 | 13.1 | -- | -- | -- | -- |
| 140.74 | 0.553 | 3.01 | -- | -- | 0.203 | -- | -- | 0.0758 | -- | 30.9 | 3 | -- | -- |
| 141.79 | 0.556 | 3.01 | -- | -- | -- | -- | -- | 0.06 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 126.99 | humidity | 80 | 90 | < th | dose independent | rect. | 23 | 3 |
| 2 | 127.02 | humidity | 80 | 30 | < th | dose independent | rect. | 23 | 5 |
| 8 | 127.31 | humidity | 80 | 30 | < th | dose dependent | rect. | 23 | 3 |
| 20 | 127.67 | humidity | 80 | 30 | < th | dose independent | rect. | 23 | 1 |
| 23 | 127.67 | humidity | 80 | 30 | < th | dose dependent | rect. | 23 | 1 |
| 61 | 131.68 | temperature | 30 | 30 | < th | dose independent | rect. | 21 | 23 |
| 62 | 131.92 | temperature | 30 | 90 | > th | dose independent | rect. | 11 | 2 |
| 65 | 132.03 | temperature | 30 | 10 | > th | dose dependent | rect. | 11 | 2 |
| 67 | 132.05 | wind | 5 | 10 | > th | dose independent | rect. | 23 | 1 |
| 90 | 132.39 | wind | 5 | 10 | > th | dose dependent | rect. | 23 | 1 |
| 112 | 132.60 | radiation | 10 | 90 | < th | dose dependent | rect. | 8 | 2 |
| 131 | 132.66 | temperature | 30 | 10 | > th | dose dependent | rect. | 16 | 21 |
| 132 | 132.68 | temperature | 30 | 30 | > th | dose independent | rect. | 16 | 21 |
| 181 | 132.87 | temperature | 30 | 30 | > th | dose independent | sin | 5 | NA |
| 216 | 132.94 | temperature | 30 | 10 | > th | dose dependent | sin | 7 | NA |
| 288 | 133.20 | wind | 7 | 10 | > th | dose dependent | rect. | 9 | 1 |
| 405 | 133.76 | temperature | 30 | 10 | > th | dose dependent | rect. | 14 | 23 |
| 417 | 133.87 | radiation | 10 | 90 | < th | dose dependent | rect. | 8 | 5 |
| 514 | 134.27 | radiation | 20 | 90 | < th | dose dependent | rect. | 19 | 18 |
| 595 | 134.47 | radiation | 20 | 90 | < th | dose dependent | rect. | 19 | 16 |
| 678 | 134.59 | wind | 3 | 1440 | < th | dose independent | rect. | 19 | 2 |
| 695 | 134.61 | radiation | 10 | 90 | < th | dose independent | rect. | 8 | 2 |
| 697 | 134.62 | temperature | 30 | 30 | > th | dose independent | no | NA | NA |
| 822 | 134.66 | wind | 7 | 10 | > th | dose independent | rect. | 9 | 1 |
| 823 | 134.66 | atmosphere | 1010 | 30 | < th | dose independent | rect. | 12 | 1 |