Os01g0688200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Alpha/beta hydrolase family protein.
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Os01g0688200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Alpha/beta hydrolase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 79.07 | 0.418 | 10.3 | -2.54 | 1.81 | 1.35 | 1.44 | -2.44 | -0.272 | 0.808 | 17.82 | 1943 | -- | -- |
| 82.51 | 0.423 | 10.3 | -2.21 | 1.8 | 1.54 | 1.36 | -- | -0.269 | 0.498 | 13.4 | 8308 | -- | -- |
| 87.63 | 0.436 | 10.3 | -2.58 | 1.83 | 1.35 | -- | -2.41 | -0.281 | 0.841 | 17.89 | 1852 | -- | -- |
| 90.22 | 0.442 | 10.2 | -2.25 | 1.79 | 1.52 | -- | -- | -0.219 | 0.555 | 12.87 | 6985 | -- | -- |
| 241.63 | 0.724 | 10.3 | -2.52 | -- | 2.18 | -- | -1.75 | -0.331 | -- | 18.1 | 981 | -- | -- |
| 121.2 | 0.516 | 10.1 | -1.43 | 1.86 | -- | 1.43 | -- | 0.177 | 0.585 | -- | -- | -- | -- |
| 129.9 | 0.534 | 10.2 | -1.48 | 1.86 | -- | -- | -- | 0.17 | 0.624 | -- | -- | -- | -- |
| 242.59 | 0.725 | 10.2 | -2.1 | -- | 2.24 | -- | -- | -0.203 | -- | 16.95 | 978 | -- | -- |
| 174.59 | 0.615 | 10.1 | -- | 1.76 | 0.555 | -- | -- | 0.385 | 0.571 | 27.98 | 2588 | -- | -- |
| 347.06 | 0.87 | 10.1 | -1.42 | -- | -- | -- | -- | 0.202 | -- | -- | -- | -- | -- |
| 187.74 | 0.641 | 10.1 | -- | 1.84 | -- | -- | -- | 0.335 | 0.585 | -- | -- | -- | -- |
| 334.79 | 0.852 | 10.2 | -- | -- | 1.46 | -- | -- | 0.196 | -- | 24.4 | 1023 | -- | -- |
| 399.91 | 0.933 | 10.1 | -- | -- | -- | -- | -- | 0.359 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.81 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 21 |
| 2 | 73.82 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 22 |
| 5 | 73.91 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 15 |
| 7 | 73.93 | wind | 7 | 43200 | > th | dose dependent | rect. | 2 | 13 |
| 10 | 73.96 | wind | 7 | 43200 | > th | dose dependent | rect. | 20 | 19 |
| 44 | 74.45 | wind | 9 | 43200 | < th | dose independent | rect. | 1 | 15 |
| 48 | 74.47 | wind | 1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 60 | 74.67 | wind | 9 | 43200 | > th | dose independent | rect. | 24 | 16 |
| 61 | 74.67 | wind | 9 | 43200 | < th | dose independent | rect. | 22 | 18 |
| 75 | 74.76 | wind | 7 | 43200 | > th | dose dependent | sin | 2 | NA |
| 78 | 74.81 | wind | 9 | 43200 | > th | dose independent | rect. | 22 | 18 |
| 80 | 74.82 | wind | 7 | 43200 | > th | dose dependent | rect. | 9 | 5 |
| 82 | 74.83 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 91 | 74.93 | radiation | 30 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 93 | 74.94 | wind | 9 | 43200 | > th | dose independent | rect. | 24 | 21 |
| 97 | 74.97 | wind | 9 | 43200 | > th | dose independent | rect. | 7 | 9 |
| 103 | 75.02 | wind | 9 | 43200 | < th | dose independent | rect. | 1 | 20 |
| 116 | 75.07 | wind | 9 | 43200 | > th | dose independent | rect. | 7 | 23 |
| 120 | 75.08 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 125 | 75.09 | wind | 9 | 43200 | < th | dose independent | rect. | 23 | 22 |
| 129 | 75.10 | wind | 9 | 43200 | > th | dose independent | no | NA | NA |
| 136 | 75.12 | wind | 9 | 43200 | < th | dose independent | rect. | 1 | 23 |
| 144 | 75.14 | wind | 3 | 43200 | > th | dose dependent | rect. | 23 | 17 |
| 152 | 75.18 | radiation | 30 | 4320 | < th | dose independent | rect. | 22 | 10 |
| 154 | 75.18 | wind | 9 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 156 | 75.18 | wind | 3 | 43200 | > th | dose dependent | rect. | 2 | 14 |
| 167 | 75.21 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 170 | 75.22 | wind | 9 | 43200 | < th | dose independent | sin | 1 | NA |
| 198 | 75.26 | wind | 9 | 43200 | > th | dose dependent | rect. | 12 | 20 |
| 199 | 75.27 | wind | 9 | 43200 | < th | dose independent | no | NA | NA |
| 208 | 75.29 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 213 | 75.31 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 234 | 75.34 | wind | 9 | 43200 | < th | dose independent | rect. | 5 | 23 |
| 237 | 75.34 | wind | 3 | 43200 | > th | dose dependent | rect. | 6 | 9 |
| 238 | 75.35 | wind | 9 | 43200 | > th | dose independent | sin | 0 | NA |
| 246 | 75.36 | wind | 3 | 43200 | > th | dose dependent | rect. | 4 | 11 |
| 288 | 75.44 | wind | 9 | 43200 | < th | dose independent | rect. | 8 | 23 |
| 346 | 75.61 | wind | 1 | 43200 | > th | dose dependent | rect. | 8 | 6 |
| 361 | 75.65 | wind | 7 | 43200 | > th | dose dependent | rect. | 23 | 22 |
| 384 | 75.71 | wind | 7 | 43200 | > th | dose dependent | rect. | 2 | 20 |
| 389 | 75.72 | wind | 7 | 43200 | > th | dose dependent | rect. | 2 | 22 |
| 413 | 75.77 | wind | 7 | 43200 | > th | dose dependent | no | NA | NA |
| 427 | 75.79 | wind | 7 | 43200 | > th | dose dependent | rect. | 4 | 23 |
| 434 | 75.80 | wind | 7 | 43200 | > th | dose dependent | rect. | 6 | 23 |
| 436 | 75.81 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 518 | 75.97 | radiation | 30 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 547 | 76.01 | wind | 7 | 43200 | > th | dose dependent | rect. | 13 | 23 |
| 575 | 76.08 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 6 |
| 578 | 76.09 | wind | 9 | 43200 | > th | dose dependent | sin | 18 | NA |
| 593 | 76.13 | wind | 5 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 597 | 76.15 | wind | 5 | 43200 | < th | dose independent | rect. | 22 | 19 |
| 604 | 76.18 | radiation | 30 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 612 | 76.20 | wind | 9 | 43200 | > th | dose dependent | rect. | 10 | 13 |
| 621 | 76.23 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 23 |
| 630 | 76.25 | radiation | 30 | 14400 | > th | dose dependent | rect. | 16 | 16 |
| 631 | 76.26 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 633 | 76.27 | radiation | 1 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 636 | 76.27 | wind | 9 | 43200 | < th | dose dependent | rect. | 6 | 8 |
| 640 | 76.28 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 642 | 76.28 | wind | 5 | 43200 | > th | dose independent | rect. | 23 | 18 |
| 647 | 76.29 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 649 | 76.29 | wind | 9 | 43200 | > th | dose dependent | rect. | 10 | 15 |
| 669 | 76.35 | wind | 9 | 43200 | > th | dose dependent | rect. | 10 | 11 |
| 671 | 76.36 | radiation | 30 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 687 | 76.41 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 688 | 76.42 | radiation | 1 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 691 | 76.43 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 705 | 76.44 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 715 | 76.46 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 721 | 76.48 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 741 | 76.57 | wind | 7 | 43200 | > th | dose independent | sin | 5 | NA |
| 742 | 76.57 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 813 | 76.84 | wind | 5 | 43200 | > th | dose independent | rect. | 4 | 12 |
| 858 | 77.01 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 889 | 77.06 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 2 |
| 912 | 77.13 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 957 | 77.29 | wind | 5 | 43200 | < th | dose independent | sin | 2 | NA |