Os01g0315600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0315600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 374.14 | 0.909 | 3.12 | 0.189 | 0.0833 | 10.8 | 0.396 | 32.5 | 0.000517 | 1.35 | 9.511 | 11 | -- | -- |
| 471.99 | 1.01 | 3.11 | 0.296 | 0.252 | 9.12 | -1.02 | -- | -0.0573 | 23.6 | 10.45 | 31 | -- | -- |
| 371.17 | 0.897 | 3.13 | 0.168 | 0.0843 | 14.3 | -- | 42.4 | -0.0095 | 0.613 | 9.976 | 10 | -- | -- |
| 381.62 | 0.91 | 3.08 | -0.0496 | 0.0642 | 2.8 | -- | -- | -0.0288 | 0.002 | 9.915 | 31 | -- | -- |
| 371.24 | 0.897 | 3.13 | 0.193 | -- | 15.8 | -- | 47.2 | -0.0104 | -- | 9.987 | 11 | -- | -- |
| 398.44 | 0.936 | 3.07 | -0.0917 | 0.00648 | -- | 0.615 | -- | -0.0214 | 3.44 | -- | -- | -- | -- |
| 399.2 | 0.936 | 3.07 | -0.103 | 0.0857 | -- | -- | -- | -0.0245 | 21.5 | -- | -- | -- | -- |
| 381.31 | 0.909 | 3.06 | -0.0168 | -- | 2.94 | -- | -- | 0.00904 | -- | 9.725 | 31 | -- | -- |
| 380.73 | 0.909 | 3.06 | -- | 0.0966 | 2.98 | -- | -- | 0.0103 | 0.181 | 9.718 | 31 | -- | -- |
| 399.63 | 0.934 | 3.07 | -0.102 | -- | -- | -- | -- | -0.0247 | -- | -- | -- | -- | -- |
| 399.48 | 0.935 | 3.07 | -- | 0.0856 | -- | -- | -- | -0.013 | 21.4 | -- | -- | -- | -- |
| 381.32 | 0.909 | 3.06 | -- | -- | 2.95 | -- | -- | 0.0108 | -- | 9.726 | 31 | -- | -- |
| 399.91 | 0.933 | 3.07 | -- | -- | -- | -- | -- | -0.0134 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 359.69 | radiation | 1 | 720 | < th | dose independent | rect. | 14 | 1 |
| 2 | 359.69 | radiation | 1 | 720 | < th | dose dependent | rect. | 14 | 1 |
| 10 | 366.42 | radiation | 1 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 17 | 367.69 | wind | 9 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 22 | 368.36 | wind | 5 | 10 | > th | dose independent | rect. | 10 | 1 |
| 26 | 368.36 | wind | 5 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 36 | 369.02 | humidity | 90 | 90 | > th | dose independent | rect. | 8 | 1 |
| 62 | 369.57 | wind | 1 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 64 | 369.87 | humidity | 90 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 75 | 370.40 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 86 | 370.83 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 103 | 371.65 | humidity | 90 | 270 | > th | dose dependent | rect. | 20 | 2 |
| 108 | 371.87 | wind | 7 | 10 | > th | dose independent | rect. | 18 | 1 |
| 116 | 372.03 | wind | 7 | 10 | > th | dose dependent | rect. | 17 | 18 |
| 123 | 372.21 | wind | 9 | 90 | > th | dose dependent | rect. | 22 | 12 |
| 135 | 372.92 | wind | 9 | 90 | > th | dose dependent | rect. | 17 | 17 |
| 136 | 373.02 | wind | 9 | 90 | > th | dose dependent | rect. | 19 | 15 |
| 161 | 373.72 | radiation | 1 | 720 | < th | dose independent | rect. | 6 | 12 |
| 193 | 374.41 | wind | 1 | 10 | < th | dose independent | rect. | 1 | 2 |
| 196 | 374.43 | wind | 7 | 10 | > th | dose independent | rect. | 17 | 18 |
| 265 | 375.58 | wind | 9 | 10 | > th | dose dependent | sin | 10 | NA |
| 337 | 376.24 | wind | 9 | 90 | > th | dose independent | rect. | 16 | 18 |
| 352 | 376.42 | humidity | 90 | 720 | > th | dose independent | rect. | 12 | 1 |
| 354 | 376.42 | humidity | 90 | 720 | > th | dose dependent | rect. | 12 | 1 |
| 365 | 376.50 | radiation | 1 | 720 | < th | dose independent | rect. | 22 | 20 |
| 367 | 376.57 | radiation | 1 | 720 | < th | dose independent | rect. | 6 | 21 |
| 376 | 376.72 | radiation | 1 | 720 | > th | dose independent | rect. | 10 | 20 |
| 412 | 377.08 | wind | 1 | 720 | > th | dose dependent | rect. | 15 | 3 |
| 431 | 377.33 | wind | 7 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 478 | 377.78 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 1 | 2 |
| 480 | 377.82 | wind | 7 | 90 | > th | dose independent | rect. | 23 | 11 |
| 488 | 377.92 | radiation | 1 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 498 | 377.92 | radiation | 1 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 525 | 378.03 | wind | 7 | 720 | > th | dose independent | rect. | 17 | 1 |
| 563 | 378.15 | wind | 9 | 90 | > th | dose independent | rect. | 16 | 7 |
| 596 | 378.39 | radiation | 1 | 720 | < th | dose independent | rect. | 11 | 16 |
| 619 | 378.59 | radiation | 1 | 720 | < th | dose dependent | rect. | 22 | 20 |
| 625 | 378.64 | wind | 7 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 627 | 378.64 | wind | 9 | 10 | > th | dose dependent | sin | 14 | NA |
| 638 | 378.71 | radiation | 1 | 720 | < th | dose dependent | rect. | 6 | 21 |
| 729 | 379.29 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 744 | 379.45 | radiation | 1 | 720 | < th | dose dependent | rect. | 11 | 16 |
| 759 | 379.57 | wind | 3 | 720 | > th | dose dependent | rect. | 17 | 1 |
| 806 | 379.89 | radiation | 1 | 720 | < th | dose independent | sin | 22 | NA |
| 994 | 380.95 | wind | 3 | 720 | > th | dose independent | rect. | 15 | 3 |
| 999 | 380.97 | radiation | 1 | 720 | > th | dose independent | sin | 22 | NA |