BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0315600 Os01g0315600|AK110785
(158 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G47630.1 | chr2:19534637-19536911 FORWARD LENGTH=352 161 1e-40
AT3G62860.1 | chr3:23239577-23242143 REVERSE LENGTH=349 150 2e-37
AT2G39420.1 | chr2:16460442-16462872 FORWARD LENGTH=318 132 8e-32
AT2G39410.2 | chr2:16455667-16458217 FORWARD LENGTH=318 130 2e-31
AT2G39400.1 | chr2:16452719-16454650 FORWARD LENGTH=312 127 2e-30
AT3G55180.1 | chr3:20454903-20456682 FORWARD LENGTH=313 120 3e-28
AT3G55190.1 | chr3:20458007-20459890 FORWARD LENGTH=320 109 6e-25
AT5G16120.2 | chr5:5265820-5267775 FORWARD LENGTH=370 87 5e-18
AT1G11090.1 | chr1:3702655-3703629 FORWARD LENGTH=325 69 1e-12
AT5G14980.1 | chr5:4849600-4850583 FORWARD LENGTH=328 69 1e-12
AT1G77420.1 | chr1:29093641-29095442 FORWARD LENGTH=383 66 9e-12
AT5G19290.1 | chr5:6494113-6495105 FORWARD LENGTH=331 65 1e-11
AT1G52760.1 | chr1:19651378-19652576 FORWARD LENGTH=333 60 4e-10
AT1G73480.1 | chr1:27629266-27632486 FORWARD LENGTH=464 56 9e-09
AT1G18360.1 | chr1:6316996-6319204 REVERSE LENGTH=383 55 1e-08
AT5G11650.1 | chr5:3745069-3746816 FORWARD LENGTH=391 55 2e-08
>AT2G47630.1 | chr2:19534637-19536911 FORWARD LENGTH=352
Length = 351
Score = 161 bits (407), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 68/102 (66%), Positives = 87/102 (85%), Gaps = 1/102 (0%)
Query: 2 EVEYHEEYVRNSRGVQLFTCGWLPAKTS-PKALVFLCHGYAMECSGYMRECGMRLAAAGY 60
E +YHEEYVRNSRGV+LF C W+P+ +S PKALVFLCHGY MECS M+ECG+RLA+AGY
Sbjct: 5 EFQYHEEYVRNSRGVELFACRWIPSSSSSPKALVFLCHGYGMECSDSMKECGIRLASAGY 64
Query: 61 GVFGMDYEGHGKSMGARCYIRSFRRLVDDCHRFFKSICGKQQ 102
VFGMDYEGHG+SMG+RCYI+ F +V+DC+ ++ SIC +++
Sbjct: 65 AVFGMDYEGHGRSMGSRCYIKKFANVVNDCYDYYTSICAQEE 106
>AT3G62860.1 | chr3:23239577-23242143 REVERSE LENGTH=349
Length = 348
Score = 150 bits (380), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 63/99 (63%), Positives = 82/99 (82%), Gaps = 1/99 (1%)
Query: 4 EYHEEYVRNSRGVQLFTCGWLPAKTSPKALVFLCHGYAMECSGYMRECGMRLAAAGYGVF 63
+Y EEY++NSR V+LF C WLP+ +SP+ALVFLCHGY MECS +MRECG+RLA+AGY VF
Sbjct: 7 QYEEEYIKNSRDVELFACRWLPS-SSPRALVFLCHGYGMECSSFMRECGIRLASAGYAVF 65
Query: 64 GMDYEGHGKSMGARCYIRSFRRLVDDCHRFFKSICGKQQ 102
GMDYEGHG+S GARCYI+ F +V+DC ++ SI +++
Sbjct: 66 GMDYEGHGRSKGARCYIKKFSNIVNDCFDYYTSISAQEE 104
>AT2G39420.1 | chr2:16460442-16462872 FORWARD LENGTH=318
Length = 317
Score = 132 bits (332), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 73/101 (72%)
Query: 3 VEYHEEYVRNSRGVQLFTCGWLPAKTSPKALVFLCHGYAMECSGYMRECGMRLAAAGYGV 62
++Y E +++N+RG++LFTC W+PAK PKALVF+CHGYAMECS M RL AG+ V
Sbjct: 8 IKYEESFIKNTRGMKLFTCKWVPAKQEPKALVFICHGYAMECSITMNSTARRLVKAGFAV 67
Query: 63 FGMDYEGHGKSMGARCYIRSFRRLVDDCHRFFKSICGKQQN 103
+G+DYEGHGKS G Y+ +F LVDD + SIC K++N
Sbjct: 68 YGIDYEGHGKSDGLSAYVPNFDHLVDDVSTHYTSICEKEEN 108
>AT2G39410.2 | chr2:16455667-16458217 FORWARD LENGTH=318
Length = 317
Score = 130 bits (328), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 72/104 (69%)
Query: 2 EVEYHEEYVRNSRGVQLFTCGWLPAKTSPKALVFLCHGYAMECSGYMRECGMRLAAAGYG 61
+++Y E +++N+RG +LFTC WLP P+ALVFLCHGY MECS M RL AG+
Sbjct: 7 DIKYEESFIKNTRGFKLFTCRWLPTNREPRALVFLCHGYGMECSITMNSTARRLVKAGFA 66
Query: 62 VFGMDYEGHGKSMGARCYIRSFRRLVDDCHRFFKSICGKQQNLY 105
V+GMDYEGHGKS G YI +F RLVDD + +IC +++N +
Sbjct: 67 VYGMDYEGHGKSDGLSAYISNFDRLVDDVSTHYTAICEREENKW 110
>AT2G39400.1 | chr2:16452719-16454650 FORWARD LENGTH=312
Length = 311
Score = 127 bits (320), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 70/101 (69%)
Query: 3 VEYHEEYVRNSRGVQLFTCGWLPAKTSPKALVFLCHGYAMECSGYMRECGMRLAAAGYGV 62
V Y E++V NSRG++LFTC W P K PKAL+FLCHGYAME S M RLA AG+ V
Sbjct: 2 VMYEEDFVLNSRGMKLFTCVWKPVKQEPKALLFLCHGYAMESSITMNSAATRLANAGFAV 61
Query: 63 FGMDYEGHGKSMGARCYIRSFRRLVDDCHRFFKSICGKQQN 103
+GMDYEGHGKS G YI +F LVDD + +IC +++N
Sbjct: 62 YGMDYEGHGKSEGLNGYISNFDDLVDDVSNHYSTICEREEN 102
>AT3G55180.1 | chr3:20454903-20456682 FORWARD LENGTH=313
Length = 312
Score = 120 bits (302), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 3 VEYHEEYVRNSRGVQLFTCGW-LPAKTSPKALVFLCHGYAMECSGYMRECGMRLAAAGYG 61
V Y E+YV NSRG+QLFTC W + PKAL+FLCHGYAME S M +RLA AG+
Sbjct: 2 VMYKEDYVSNSRGIQLFTCSWKQEEQQEPKALIFLCHGYAMESSITMSSTAVRLANAGFS 61
Query: 62 VFGMDYEGHGKSMGARCYIRSFRRLVDDCHRFFKSICGKQQN 103
V+GMDYEGHGKS G Y++ F LV D + SIC ++N
Sbjct: 62 VYGMDYEGHGKSGGLNGYVKKFDDLVQDVSSHYSSICELEEN 103
>AT3G55190.1 | chr3:20458007-20459890 FORWARD LENGTH=320
Length = 319
Score = 109 bits (273), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 62/102 (60%)
Query: 2 EVEYHEEYVRNSRGVQLFTCGWLPAKTSPKALVFLCHGYAMECSGYMRECGMRLAAAGYG 61
+V Y EE++ NSRG+QL TC W P P+AL+F CHGYA++CS ++ + A G+
Sbjct: 7 QVGYSEEFIENSRGMQLLTCKWFPVNQEPRALIFFCHGYAIDCSTTFKDIAPKFAKEGFA 66
Query: 62 VFGMDYEGHGKSMGARCYIRSFRRLVDDCHRFFKSICGKQQN 103
V G++YEGHG+S G YI +F L+DD F I N
Sbjct: 67 VHGIEYEGHGRSSGLSVYIDNFDLLIDDVSSHFSKISEMGDN 108
>AT5G16120.2 | chr5:5265820-5267775 FORWARD LENGTH=370
Length = 369
Score = 86.7 bits (213), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 56/100 (56%)
Query: 3 VEYHEEYVRNSRGVQLFTCGWLPAKTSPKALVFLCHGYAMECSGYMRECGMRLAAAGYGV 62
++ E + NSRGV++F+ WLP + P+ALV CHGY C+ + RLA +GYGV
Sbjct: 71 IKTKESFEVNSRGVEIFSKSWLPEASKPRALVCFCHGYGDTCTFFFEGIARRLALSGYGV 130
Query: 63 FGMDYEGHGKSMGARCYIRSFRRLVDDCHRFFKSICGKQQ 102
F MDY G G S G YI SF LV D + +I +
Sbjct: 131 FAMDYPGFGLSEGLHGYIPSFDLLVQDVIEHYSNIKANPE 170
>AT1G11090.1 | chr1:3702655-3703629 FORWARD LENGTH=325
Length = 324
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 12 NSRGVQLFTCGWLPAKTSP-KALVFLCHGYAMECSGYMRECGMRLAAAGYGVFGMDYEGH 70
+ RG+ LFT WLP+ +SP + L+F+ HGY + S + + LA G+ F +D EGH
Sbjct: 36 SPRGLNLFTRSWLPSSSSPPRGLIFMVHGYGNDVSWTFQSTPIFLAQMGFACFALDIEGH 95
Query: 71 GKSMGARCYIRSFRRLVDDCHRFFKSICGKQQN 103
G+S G R Y+ S +VDD FF SI +QN
Sbjct: 96 GRSDGVRAYVPSVDLVVDDIISFFNSI---KQN 125
>AT5G14980.1 | chr5:4849600-4850583 FORWARD LENGTH=328
Length = 327
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%)
Query: 3 VEYHEEYVRNSRGVQLFTCGWLPAKTSPKALVFLCHGYAMECSGYMRECGMRLAAAGYGV 62
V + YV N G++LFT W P P L+ + HG+ E S +++ + A +GY
Sbjct: 29 VTHSSAYVTNPTGLKLFTQWWTPLNRPPLGLIAVVHGFTGESSWFLQLTSVLFAKSGYLT 88
Query: 63 FGMDYEGHGKSMGARCYIRSFRRLVDDCHRFFKS 96
+D++GHG S G +I + +VDDC FF
Sbjct: 89 CAIDHQGHGFSDGLTAHIPNINLIVDDCISFFDD 122
>AT1G77420.1 | chr1:29093641-29095442 FORWARD LENGTH=383
Length = 382
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 3 VEYHEEYVRNSRGVQLFTCGWLPAKTSP-KALVFLCHGYAMECSGYMRECGMRLAAAGYG 61
+ E Y RNS+G +F WLP KA V CHGY C+ + ++A GYG
Sbjct: 91 IRTEEWYERNSKGEDIFCKSWLPKSGDEIKAAVCFCHGYGSTCTFFFDGIAKQIAGFGYG 150
Query: 62 VFGMDYEGHGKSMGARCYIRSFRRLVDDCHRFFKSICGKQQ--NLYPFFI 109
V+ +D+ G G S G +I SF L D+ F + G+ + NL F +
Sbjct: 151 VYAIDHPGFGLSDGLHGHIPSFDDLADNAIEQFTKMKGRSELRNLPRFLL 200
>AT5G19290.1 | chr5:6494113-6495105 FORWARD LENGTH=331
Length = 330
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 3 VEYHEEYVRNSRGVQLFTCGWLP-AKTSPKALVFLCHGYAMECSGYMRECGMRLAAAGYG 61
V + ++ N RG++LFT W P T P ++ + HG+ E S +++ + A +G+
Sbjct: 29 VSHSSAFITNPRGLKLFTQWWSPLPPTKPIGIIAVVHGFTGESSWFLQLTSILFAKSGFI 88
Query: 62 VFGMDYEGHGKSMGARCYIRSFRRLVDDCHRFFKSICGKQ 101
+D++GHG S G +I +VDDC FF +Q
Sbjct: 89 TCAIDHQGHGFSDGLIAHIPDINPVVDDCISFFDDFRSRQ 128
>AT1G52760.1 | chr1:19651378-19652576 FORWARD LENGTH=333
Length = 332
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 5 YHEEYVRNSRGV------QLFTCGWLPAKTSPKALVFLCHGYAMECSGYMRECGMRLAAA 58
Y + VRNS+ +LFT +LP K V++ HGY + S ++ M ++
Sbjct: 32 YTSQGVRNSKSYFETPNGKLFTQSFLPLDGEIKGTVYMSHGYGSDTSWMFQKICMSFSSW 91
Query: 59 GYGVFGMDYEGHGKSMGARCYIRSFRRLVDDCHRFFKSI-CGKQQNLYPFFI 109
GY VF D GHG+S G RCY+ ++ FFK + C P F+
Sbjct: 92 GYAVFAADLLGHGRSDGIRCYMGDMEKVAATSLAFFKHVRCSDPYKDLPAFL 143
>AT1G73480.1 | chr1:27629266-27632486 FORWARD LENGTH=464
Length = 463
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 14 RGVQLFTCGWLPAKTSPKALVFLCHGYAMECSGYMRECGMRLAAAGYGVFGMDYEGHGKS 73
RG LF+ W P + + L+ L HG E SG + +L A G+ V+G+D+ GHG S
Sbjct: 194 RGDTLFSQSWSPLSPNHRGLIVLLHGLN-EHSGRYSDFAKQLNANGFKVYGIDWIGHGGS 252
Query: 74 MGARCYIRSFRRLVDDCHRFFKSICGKQQNL 104
G Y+ S V D F + + + L
Sbjct: 253 DGLHAYVPSLDYAVTDLKSFLEKVFTENPGL 283
>AT1G18360.1 | chr1:6316996-6319204 REVERSE LENGTH=383
Length = 382
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 14 RGVQLFTCGWLPAKTSP-KALVFLCHGYAMECSGYMRECGMRLAAAGYGVFGMDYEGHGK 72
RG LFT W P ++ + LV L HG E SG + +L G+ V+G+D+ GHG
Sbjct: 112 RGDTLFTQSWTPVDSAKNRGLVVLLHGLN-EHSGRYSDFAKQLNVNGFKVYGIDWIGHGG 170
Query: 73 SMGARCYIRSFRRLVDDCHRFFKSICGKQQNL 104
S G Y+ S V D F + + + L
Sbjct: 171 SDGLHAYVPSLDYAVADLKSFIEKVIAENPGL 202
>AT5G11650.1 | chr5:3745069-3746816 FORWARD LENGTH=391
Length = 390
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 14 RGVQLFTCGWLPAKTSPKALVFLCHGYAMECSGYMRECGMRLAAAGYGVFGMDYEGHGKS 73
RG LF+ WLP + ++ + HG E SG + +L A+ GV+ MD+ GHG S
Sbjct: 110 RGNALFSRSWLPISGELRGILIIIHGLN-EHSGRYSQFAKQLNASNLGVYAMDWIGHGGS 168
Query: 74 MGARCYIRSFRRLVDDCHRFFKSI 97
G Y+ S +V D F + I
Sbjct: 169 DGLHGYVPSLDYVVSDTEAFLEKI 192
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.332 0.141 0.466
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,451,368
Number of extensions: 133070
Number of successful extensions: 372
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 364
Number of HSP's successfully gapped: 16
Length of query: 158
Length of database: 11,106,569
Length adjustment: 90
Effective length of query: 68
Effective length of database: 8,639,129
Effective search space: 587460772
Effective search space used: 587460772
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 107 (45.8 bits)