Os11g0100600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Alpha/beta hydrolase family protein.
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Os11g0100600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Alpha/beta hydrolase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 256.68 | 0.753 | 6.49 | -0.307 | 5.03 | 3.15 | -2.72 | -3.92 | -0.499 | 12.6 | 36.56 | 648 | 18.4 | 5.28 |
| 262.62 | 0.755 | 6.52 | -0.592 | 4.56 | 2.72 | -0.168 | -- | -0.565 | 12.7 | 32.58 | 599 | 19.5 | 5.17 |
| 257.52 | 0.747 | 6.51 | -0.558 | 5.22 | 3.31 | -- | -0.873 | -0.513 | 13 | 37.3 | 607 | 19 | 6.13 |
| 259.85 | 0.751 | 6.52 | -0.596 | 5.31 | 3.41 | -- | -- | -0.531 | 13.1 | 36.94 | 603 | 19 | 6.02 |
| 554.42 | 1.1 | 6.37 | 0.518 | -- | 3.71 | -- | -5.09 | 0.0688 | -- | 60.74 | 2614 | 20.9 | 5.83 |
| 310.05 | 0.825 | 6.56 | -0.841 | 3.24 | -- | 0.124 | -- | -0.741 | 11.6 | -- | -- | -- | -- |
| 310.11 | 0.825 | 6.56 | -0.836 | 3.24 | -- | -- | -- | -0.741 | 11.6 | -- | -- | -- | -- |
| 315.93 | 0.828 | 6.34 | -0.288 | -- | 4.1 | -- | -- | -0.235 | -- | 102.2 | 2475 | 21.4 | 11 |
| 268.18 | 0.763 | 6.51 | -- | 5.36 | 3.54 | -- | -- | -0.487 | 13.1 | 36.33 | 605 | 18.9 | 6.08 |
| 970.09 | 1.46 | 6.63 | -0.926 | -- | -- | -- | -- | -0.778 | -- | -- | -- | -- | -- |
| 328.53 | 0.848 | 6.54 | -- | 3.25 | -- | -- | -- | -0.648 | 11.6 | -- | -- | -- | -- |
| 297.67 | 0.804 | 6.56 | -- | -- | 3.84 | -- | -- | -0.436 | -- | 141.4 | 2533 | 20.8 | 11.5 |
| 992.7 | 1.47 | 6.61 | -- | -- | -- | -- | -- | -0.675 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 261.73 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 5 |
| 2 | 261.96 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 3 |
| 9 | 265.09 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 11 |
| 21 | 267.69 | temperature | 30 | 90 | < th | dose dependent | sin | 9 | NA |
| 37 | 268.83 | temperature | 25 | 720 | < th | dose independent | rect. | 15 | 8 |
| 39 | 268.89 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 41 | 268.95 | wind | 9 | 30 | > th | dose dependent | rect. | 17 | 21 |
| 45 | 268.96 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 9 |
| 62 | 269.89 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 19 |
| 65 | 269.95 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 9 |
| 67 | 270.02 | temperature | 10 | 90 | > th | dose dependent | rect. | 16 | 11 |
| 81 | 270.54 | temperature | 25 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 123 | 271.66 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 13 |
| 143 | 272.11 | temperature | 30 | 10 | < th | dose dependent | rect. | 22 | 11 |
| 149 | 272.20 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 5 |
| 190 | 272.61 | temperature | 30 | 720 | < th | dose dependent | sin | 15 | NA |
| 192 | 272.62 | wind | 1 | 30 | > th | dose independent | rect. | 23 | 9 |
| 212 | 272.93 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 21 |
| 218 | 272.98 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 260 | 273.34 | radiation | 1 | 720 | < th | dose dependent | rect. | 17 | 7 |
| 280 | 273.53 | temperature | 10 | 90 | > th | dose dependent | sin | 9 | NA |
| 294 | 273.69 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 5 |
| 315 | 273.96 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 3 |
| 396 | 274.90 | radiation | 20 | 14400 | < th | dose independent | rect. | 19 | 11 |
| 400 | 274.94 | temperature | 25 | 720 | < th | dose independent | sin | 16 | NA |
| 442 | 275.42 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 6 |
| 473 | 275.66 | temperature | 20 | 90 | > th | dose independent | rect. | 16 | 22 |
| 551 | 276.39 | wind | 9 | 30 | > th | dose independent | rect. | 17 | 21 |
| 601 | 276.70 | temperature | 20 | 90 | > th | dose independent | rect. | 16 | 20 |
| 613 | 276.78 | wind | 1 | 30 | > th | dose independent | rect. | 23 | 17 |
| 654 | 276.98 | wind | 1 | 10 | > th | dose independent | rect. | 2 | 14 |
| 682 | 277.17 | radiation | 1 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 714 | 277.35 | radiation | 1 | 720 | < th | dose independent | rect. | 16 | 8 |
| 716 | 277.36 | temperature | 25 | 720 | < th | dose independent | rect. | 12 | 18 |
| 746 | 277.60 | radiation | 10 | 90 | < th | dose independent | rect. | 9 | 18 |
| 757 | 277.66 | radiation | 1 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 760 | 277.69 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 14 |
| 777 | 277.83 | humidity | 60 | 43200 | < th | dose dependent | rect. | 4 | 5 |
| 813 | 278.16 | radiation | 1 | 1440 | < th | dose independent | rect. | 18 | 9 |
| 829 | 278.26 | radiation | 10 | 10 | < th | dose independent | rect. | 9 | 18 |
| 873 | 278.57 | radiation | 40 | 14400 | < th | dose independent | rect. | 15 | 12 |
| 879 | 278.66 | radiation | 40 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 905 | 278.81 | temperature | 20 | 270 | > th | dose independent | rect. | 16 | 18 |
| 909 | 278.84 | temperature | 20 | 90 | > th | dose independent | rect. | 16 | 11 |
| 942 | 278.98 | humidity | 50 | 43200 | > th | dose independent | rect. | 3 | 7 |
| 955 | 279.06 | radiation | 10 | 10 | < th | dose independent | sin | 15 | NA |
| 958 | 279.06 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 11 |
| 965 | 279.10 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 973 | 279.15 | humidity | 50 | 43200 | > th | dose independent | rect. | 22 | 12 |
| 977 | 279.16 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 988 | 279.21 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 16 |
| 996 | 279.27 | temperature | 25 | 720 | > th | dose independent | rect. | 11 | 13 |