Os12g0100500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Alpha/beta hydrolase family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0100500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Alpha/beta hydrolase family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 90.7 | 0.447 | 9.78 | 1.34 | 2.35 | -1.98 | 0.288 | 2.09 | 0.327 | 11.7 | 18.57 | 1412 | -- | -- |
| 102.02 | 0.47 | 9.84 | 1.22 | 2.4 | -2.18 | 0.201 | -- | 0.241 | 11.7 | 14.8 | 5757 | -- | -- |
| 91.05 | 0.444 | 9.78 | 1.34 | 2.35 | -1.98 | -- | 2.06 | 0.326 | 11.7 | 18.63 | 1413 | -- | -- |
| 97.74 | 0.46 | 9.81 | 0.959 | 2.39 | -1.93 | -- | -- | 0.212 | 11.4 | 18.25 | 1391 | -- | -- |
| 317.93 | 0.83 | 9.74 | 1.99 | -- | -3.2 | -- | 4.42 | 0.572 | -- | 19.9 | 915 | -- | -- |
| 191.71 | 0.649 | 9.95 | 0.0496 | 2.45 | -- | 0.318 | -- | -0.264 | 11.8 | -- | -- | -- | -- |
| 192.14 | 0.649 | 9.95 | 0.0623 | 2.45 | -- | -- | -- | -0.262 | 11.8 | -- | -- | -- | -- |
| 319.86 | 0.833 | 9.86 | 1.04 | -- | -3.52 | -- | -- | 0.337 | -- | 17 | 905 | -- | -- |
| 110.02 | 0.489 | 9.85 | -- | 2.42 | -1.79 | -- | -- | 0.113 | 11.7 | 17.52 | 1410 | -- | -- |
| 570.32 | 1.12 | 10 | -0.01 | -- | -- | -- | -- | -0.294 | -- | -- | -- | -- | -- |
| 192.25 | 0.649 | 9.95 | -- | 2.45 | -- | -- | -- | -0.269 | 11.8 | -- | -- | -- | -- |
| 344.98 | 0.865 | 9.9 | -- | -- | -2.99 | -- | -- | 0.168 | -- | 18.16 | 901 | -- | -- |
| 570.32 | 1.11 | 10 | -- | -- | -- | -- | -- | -0.292 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.24 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 2 |
| 2 | 87.31 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 4 | 87.53 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 8 | 87.87 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 8 |
| 12 | 88.05 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 16 |
| 53 | 89.18 | temperature | 20 | 1440 | > th | dose dependent | sin | 12 | NA |
| 80 | 89.61 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 166 | 90.69 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 17 |
| 365 | 92.01 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 396 | 92.17 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 408 | 92.24 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 443 | 92.39 | temperature | 30 | 1440 | < th | dose dependent | sin | 13 | NA |
| 465 | 92.49 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 6 |
| 540 | 92.84 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 9 |
| 688 | 93.50 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 6 |
| 857 | 94.05 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 876 | 94.12 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 935 | 94.29 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 23 |