BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0192900 Os01g0192900|J065067C08
(461 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0192900 1-aminocyclopropane-1-carboxylate synthase fam... 793 0.0
Os05g0319200 624 e-179
Os05g0196600 604 e-173
Os03g0727600 1-aminocyclopropane-1-carboxylate synthase 1 (... 445 e-125
Os04g0578000 Similar to 1-aminocyclopropane-1-carboxylate s... 442 e-124
Os06g0130400 Similar to 1-aminocyclopropane-1-carboxylate s... 364 e-101
Z27243 118 1e-26
Z27244 114 2e-25
Os01g0871300 1-aminocyclopropane-1-carboxylate synthase fam... 70 5e-12
Os07g0108300 Similar to Alanine aminotransferase 69 6e-12
Os09g0433900 Similar to Alanine aminotransferase 2 (EC 2.6.... 68 1e-11
>Os01g0192900 1-aminocyclopropane-1-carboxylate synthase family protein
Length = 461
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/450 (88%), Positives = 397/450 (88%)
Query: 1 MGGKLLPAAAFAGSAPPLSQVATSAAHGEDSPYFAGWKAYDEDPYHAVDNPDGVIQMGLA 60
MGGKLLPAAAFAGSAPPLSQVATSAAHGEDSPYFAGWKAYDEDPYHAVDNPDGVIQMGLA
Sbjct: 1 MGGKLLPAAAFAGSAPPLSQVATSAAHGEDSPYFAGWKAYDEDPYHAVDNPDGVIQMGLA 60
Query: 61 ENQVSFDLLEAYLRDHPEXXXXXXXXXXXXXFRDNALFQDYHGLKSFRKAMASFMGKIRG 120
ENQVSFDLLEAYLRDHPE FRDNALFQDYHGLKSFRKAMASFMGKIRG
Sbjct: 61 ENQVSFDLLEAYLRDHPEAAGWSTGGAGAGSFRDNALFQDYHGLKSFRKAMASFMGKIRG 120
Query: 121 GKARFDPDHIVLTAGATAANELLTFILANPGDALLIPTPYYPGFDRDLRWRTGVNIVPVR 180
GKARFDPDHIVLTAGATAANELLTFILANPGDALLIPTPYYPGFDRDLRWRTGVNIVPVR
Sbjct: 121 GKARFDPDHIVLTAGATAANELLTFILANPGDALLIPTPYYPGFDRDLRWRTGVNIVPVR 180
Query: 181 CDSANGFQVTVXXXXXXXXXXXXVGMRARAVLITNPSNPLGTTVRRKMLDDILDFVSRND 240
CDSANGFQVTV VGMRARAVLITNPSNPLGTTVRRKMLDDILDFVSRND
Sbjct: 181 CDSANGFQVTVAALQAAYDEAAAVGMRARAVLITNPSNPLGTTVRRKMLDDILDFVSRND 240
Query: 241 IHLISDEIYSGSVFAAPDLVSVAELVEARGGDGIAGRVHIVYSLSKDLGLPGFRVGVVYS 300
IHLISDEIYSGSVFAAPDLVSVAELVEARGGDGIAGRVHIVYSLSKDLGLPGFRVGVVYS
Sbjct: 241 IHLISDEIYSGSVFAAPDLVSVAELVEARGGDGIAGRVHIVYSLSKDLGLPGFRVGVVYS 300
Query: 301 YNDAVVTAARRMSSFTLVSSQTQKTLAAMLSDEAFAGEYIRTNXXXXXXXXXXXXAGLAR 360
YNDAVVTAARRMSSFTLVSSQTQKTLAAMLSDEAFAGEYIRTN AGLAR
Sbjct: 301 YNDAVVTAARRMSSFTLVSSQTQKTLAAMLSDEAFAGEYIRTNRRRLRERHEHVVAGLAR 360
Query: 361 AGVPCLRGNAGLFVWMDMXXXXXXXXXXXXXXXXWEKLLRQAKLNISPGSSCHCSEAGWF 420
AGVPCLRGNAGLFVWMDM WEKLLRQAKLNISPGSSCHCSEAGWF
Sbjct: 361 AGVPCLRGNAGLFVWMDMRRLLLGGGGVGGELRLWEKLLRQAKLNISPGSSCHCSEAGWF 420
Query: 421 RVCFANMSLDTLDLALHRISRFMDTWNGTK 450
RVCFANMSLDTLDLALHRISRFMDTWNGTK
Sbjct: 421 RVCFANMSLDTLDLALHRISRFMDTWNGTK 450
>Os05g0319200
Length = 496
Score = 624 bits (1608), Expect = e-179, Method: Compositional matrix adjust.
Identities = 325/464 (70%), Positives = 346/464 (74%), Gaps = 18/464 (3%)
Query: 1 MGGKLLP-AAAFAGSAPPLSQVATSAAHGEDSPYFAGWKAYDEDPYHAVDNPDGVIQMGL 59
MG KLL A A S+P LS+VATSAAHGE SPYFAGWKAYDEDPY A NPDGVIQMGL
Sbjct: 1 MGVKLLADGCAGASSSPALSRVATSAAHGEGSPYFAGWKAYDEDPYDAAANPDGVIQMGL 60
Query: 60 AENQVSFDLLEAYLRDHPEXXX-XXXXXXXXXXFRDNALFQDYHGLKSFRKAMASFMGKI 118
AENQVS DLLE YLR+HPE FRDNALFQDYHGL +FRKAMA FM KI
Sbjct: 61 AENQVSIDLLEGYLREHPEAAAWGVAGDGGGDSFRDNALFQDYHGLANFRKAMARFMEKI 120
Query: 119 RGGKARFDPDHIVLTAGATAANELLTFILANPGDALLIPTPYYPGFDRDLRWRTGVNIVP 178
GGKA FDPD IVLTAGATAANELLTFILA+P DALLIPTPYYPGFDRDLRWRTGVN+VP
Sbjct: 121 MGGKATFDPDRIVLTAGATAANELLTFILADPRDALLIPTPYYPGFDRDLRWRTGVNVVP 180
Query: 179 VRCDSANGFQVTVXXXXXXXXXXXXVGMRARAVLITNPSNPLGTTVRRKMLDDILDFVSR 238
V CDSANGFQVT GMR R VLITNPSNPLGTT RR+ L+ IL FV+R
Sbjct: 181 VHCDSANGFQVTAAALQAAHDEAAAAGMRVRGVLITNPSNPLGTTARREALEGILGFVAR 240
Query: 239 NDIHLISDEIYSGSVFAAPDLVSVAELVEARGGDG------------IAGRVHIVYSLSK 286
NDIHL+SDEIYSGSVFAAPDLVSVAELVE+ +A RVH+VYSLSK
Sbjct: 241 NDIHLVSDEIYSGSVFAAPDLVSVAELVESSSSRARHRGEDDDGDVGVADRVHVVYSLSK 300
Query: 287 DLGLPGFRVGVVYSYNDAVVTAARRMSSFTLVSSQTQKTLAAMLSDEAFAGEYIRTNXXX 346
DLGLPGFRVGVVYS NDAVV AARRMSSFTLVSSQTQ+TLAA+LSDEAF Y+ N
Sbjct: 301 DLGLPGFRVGVVYSRNDAVVAAARRMSSFTLVSSQTQRTLAAVLSDEAFVDAYVAANRAR 360
Query: 347 XXXXXXXXXAGLARAGVPCLRGNAGLFVWMDMXXXXXX----XXXXXXXXXXWEKLLRQA 402
AGLARAGVPCLRGNAGLFVWMDM W++LLR+
Sbjct: 361 LRERHDHVVAGLARAGVPCLRGNAGLFVWMDMRRLLLGDGGDAATFAGELRLWDRLLREV 420
Query: 403 KLNISPGSSCHCSEAGWFRVCFANMSLDTLDLALHRISRFMDTW 446
KLN+SPGSSCHCSE GWFRVCFANMSL TLD+AL RISRFMD W
Sbjct: 421 KLNVSPGSSCHCSEPGWFRVCFANMSLATLDVALERISRFMDAW 464
>Os05g0196600
Length = 437
Score = 604 bits (1558), Expect = e-173, Method: Compositional matrix adjust.
Identities = 307/437 (70%), Positives = 336/437 (76%), Gaps = 16/437 (3%)
Query: 21 VATSAAHGEDSPYFAGWKAYDEDPYHAVDNPDGVIQMGLAENQVSFDLLEAYLRDHPEXX 80
+A SAAHGEDSPYFAGW+AYDEDPY + NP GVIQMGLAENQVSFDLLE Y+R+HPE
Sbjct: 1 MAMSAAHGEDSPYFAGWRAYDEDPYDPITNPQGVIQMGLAENQVSFDLLEEYMREHPEAS 60
Query: 81 XXXXXXXXXXXFRDNALFQDYHGLKSFRKAMASFMGKIRGGKARFDPDHIVLTAGATAAN 140
R+NALFQDYHGLKSFRKAMASFM IRGGKARFDPD +VLTAGATAAN
Sbjct: 61 DCGAG------VRENALFQDYHGLKSFRKAMASFMETIRGGKARFDPDRVVLTAGATAAN 114
Query: 141 ELLTFILANPGDALLIPTPYYPGFDRDLRWRTGVNIVPVRCDSANGFQVTVXXXXXXXXX 200
ELLTFILA+PGDALL+PTPYYPGFDRDLRWRTGVNIVPV CDSA GFQVT
Sbjct: 115 ELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVNIVPVSCDSAAGFQVTAGALRAAYDE 174
Query: 201 XXXVGMRARAVLITNPSNPLGTTVRRKMLDDILDFVSRNDIHLISDEIYSGSVFAAPDLV 260
G R R VLITNPSNPLGTT R +L+ ILDFV+R+D+HLISDEIYSGSVFAAPDLV
Sbjct: 175 AVAAGTRVRGVLITNPSNPLGTTAARGVLEGILDFVARHDMHLISDEIYSGSVFAAPDLV 234
Query: 261 SVAELVE----ARGG----DGIAGRVHIVYSLSKDLGLPGFRVGVVYSYNDAVVTAARRM 312
SVAELV+ ARGG + IA RVH+VYSLSKDLGLPGFRVGVVYSYNDAVV AARRM
Sbjct: 235 SVAELVDERRRARGGAADAEDIARRVHVVYSLSKDLGLPGFRVGVVYSYNDAVVAAARRM 294
Query: 313 SSFTLVSSQTQKTLAAMLSDEAFAGEYIRTNXXXXXXXXXXXXAGLARAGVPCLRG-NAG 371
SSFTLVSSQTQ+TLAAMLSD AFA Y+R+N AGL RAGV CLRG NAG
Sbjct: 295 SSFTLVSSQTQRTLAAMLSDAAFAAAYVRSNRDRLRERHARAVAGLRRAGVACLRGANAG 354
Query: 372 LFVWMDMXXXX-XXXXXXXXXXXXWEKLLRQAKLNISPGSSCHCSEAGWFRVCFANMSLD 430
LFVW+DM W +++ +AKLNISPGSSCHC E GWFRVCFANMSL+
Sbjct: 355 LFVWVDMRRLLGDGEATVAGELRLWRRVVAEAKLNISPGSSCHCREPGWFRVCFANMSLE 414
Query: 431 TLDLALHRISRFMDTWN 447
TLD+ALHR+ F+ W
Sbjct: 415 TLDVALHRLGCFIKKWE 431
>Os03g0727600 1-aminocyclopropane-1-carboxylate synthase 1 (EC 4.4.1.14) (ACC
synthase 1) (S-adenosyl-L-methionine
methylthioadenosine-lyase 1)
Length = 487
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/435 (54%), Positives = 284/435 (65%), Gaps = 5/435 (1%)
Query: 18 LSQVATSAAHGEDSPYFAGWKAYDEDPYHAVDNPDGVIQMGLAENQVSFDLLEAYLRDHP 77
LS+ A +HG+DS YF GW+ Y+++P+ V NP G+IQMGLAENQ+SFDLLE +L +P
Sbjct: 14 LSKKAGCNSHGQDSSYFLGWQEYEKNPFDPVSNPSGIIQMGLAENQLSFDLLEEWLEKNP 73
Query: 78 EXXXXXXXXXXXXXFRDNALFQDYHGLKSFRKAMASFMGKIRGGKARFDPDHIVLTAGAT 137
FR+ ALFQDYHGL +F+ A+A FM + RG K FDP +IVLTAGAT
Sbjct: 74 HALGLRREGGGASVFRELALFQDYHGLPAFKNALARFMSEQRGYKVVFDPSNIVLTAGAT 133
Query: 138 AANELLTFILANPGDALLIPTPYYPGFDRDLRWRTGVNIVPVRCDSANGFQVTVXXXXXX 197
+ANE L F LA+ GDA LIPTPYYPGFDRDL+WRTG IVPV C SANGF+VT
Sbjct: 134 SANEALMFCLADHGDAFLIPTPYYPGFDRDLKWRTGAEIVPVHCASANGFRVTRPALDDA 193
Query: 198 XXXXXXVGMRARAVLITNPSNPLGTTVRRKMLDDILDFVSRNDIHLISDEIYSGSVFAAP 257
+R + VLITNPSNPLGT R L+ I+DFV+ IHLISDEIY+G+ FA P
Sbjct: 194 YRRAQKRRLRVKGVLITNPSNPLGTASPRADLETIVDFVAAKGIHLISDEIYAGTAFAEP 253
Query: 258 --DLVSVAELVEARGGDG--IAGRVHIVYSLSKDLGLPGFRVGVVYSYNDAVVTAARRMS 313
VS E+V R G G ++ RVH+VYSLSKDLGLPGFRVG +YS N AVV+AA +MS
Sbjct: 254 PAGFVSALEVVAGRDGGGADVSDRVHVVYSLSKDLGLPGFRVGAIYSANAAVVSAATKMS 313
Query: 314 SFTLVSSQTQKTLAAMLSDEAFAGEYIRTNXXXXXXXXXXXXAGLARAGVPCLRGNAGLF 373
SF LVSSQTQ LAA+L D F Y+ N GL G+ CL NAGLF
Sbjct: 314 SFGLVSSQTQYLLAALLGDRDFTRSYVAENKRRIKERHDQLVDGLREIGIGCLPSNAGLF 373
Query: 374 VWMDMXXXXXXXXXXXXXXXXWEKLLRQAKLNISPGSSCHCSEAGWFRVCFANMSLDTLD 433
W+DM W+K++ + LNISPGSSCHC E GWFRVCFANMS TLD
Sbjct: 374 CWVDM-SHLMRSRSFAGEMELWKKVVFEVGLNISPGSSCHCREPGWFRVCFANMSAKTLD 432
Query: 434 LALHRISRFMDTWNG 448
+A+ R+ F+D+ G
Sbjct: 433 VAMQRLRSFVDSATG 447
>Os04g0578000 Similar to 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14)
(Fragment)
Length = 483
Score = 442 bits (1137), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/426 (51%), Positives = 274/426 (64%), Gaps = 3/426 (0%)
Query: 18 LSQVATSAAHGEDSPYFAGWKAYDEDPYHAVDNPDGVIQMGLAENQVSFDLLEAYLRDHP 77
LS A HGE+S YF GWKAYD +P+ N GVIQMGLAENQ+S DL+E + ++HP
Sbjct: 9 LSTKAAGDDHGENSSYFDGWKAYDTNPFDLRHNRGGVIQMGLAENQLSLDLIEEWSKNHP 68
Query: 78 EXXXXXXXXXXXXXFRDNALFQDYHGLKSFRKAMASFMGKIRGGKARFDPDHIVLTAGAT 137
E F+ A FQDYHGL FRKAMA FMG++RGGKA FDPD +V++ GAT
Sbjct: 69 EASICTPEGVSQ--FKRIANFQDYHGLPEFRKAMAQFMGQVRGGKATFDPDRVVMSGGAT 126
Query: 138 AANELLTFILANPGDALLIPTPYYPGFDRDLRWRTGVNIVPVRCDSANGFQVTVXXXXXX 197
A E L F LANPG+A L+PTPYYP FDRD WR+G+ ++P+ C S N F++T
Sbjct: 127 GAQETLAFCLANPGEAFLVPTPYYPAFDRDCCWRSGIKLLPIECHSFNDFRLTKEALVSA 186
Query: 198 XXXXXXVGMRARAVLITNPSNPLGTTVRRKMLDDILDFVSRNDIHLISDEIYSGSVFAAP 257
G+ + +LITNPSNPLGT R L + F + + +HL+ DEIY+GSVFA P
Sbjct: 187 YDGARRQGISVKGILITNPSNPLGTITDRDTLAMLATFATEHRVHLVCDEIYAGSVFATP 246
Query: 258 DLVSVAELVEARGGDGIAGRVHIVYSLSKDLGLPGFRVGVVYSYNDAVVTAARRMSSFTL 317
+ VS+AE++E +H+VYSLSKD GLPGFRVG++YSYNDAVV AARRMSSF L
Sbjct: 247 EYVSIAEVIERDVPWCNRDLIHVVYSLSKDFGLPGFRVGIIYSYNDAVVAAARRMSSFGL 306
Query: 318 VSSQTQKTLAAMLSDEAFAGEYIRTNXXXXXXXXXXXXAGLARAGVPCLRGNAGLFVWMD 377
VSSQTQ LA MLSDE F G +++ + +GL G+ CLRGNAGLF WMD
Sbjct: 307 VSSQTQYFLARMLSDEEFIGRFLQESKCRLVARHERFTSGLREVGIGCLRGNAGLFSWMD 366
Query: 378 MXXXXXXXXXXXXXXXXWEKLLRQAKLNISPGSSCHCSEAGWFRVCFANMSLDTLDLALH 437
+ W ++ Q KLN+SPG+S HC E GWFRVC ANM +T+++AL
Sbjct: 367 L-RRMLREKTAEAELELWRVIVHQVKLNVSPGTSFHCREPGWFRVCHANMDDETMEVALG 425
Query: 438 RISRFM 443
RI F+
Sbjct: 426 RIHDFV 431
>Os06g0130400 Similar to 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14)
(Fragment)
Length = 542
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/447 (39%), Positives = 265/447 (59%), Gaps = 11/447 (2%)
Query: 3 GKLLPAAAFAGSAPPLSQVATSAAHGEDSPYFAGWKAYDEDPYHAVDNPDGVIQMGLAEN 62
G L P AA P ++ +DS Y+AG + DPYH V NP G+IQ+GLAEN
Sbjct: 98 GLLAPRAAL-----PAISARGASVRDDDSLYYAGLRRCAADPYHPVTNPSGIIQLGLAEN 152
Query: 63 QVSFDLLEAYLRDHPEXXXXXX----XXXXXXXFRDNALFQDYHGLKSFRKAMASFMGKI 118
+S DL+ ++ +H R A +Q Y G+ + + A+A FM +I
Sbjct: 153 YLSLDLVGRWMEEHAAEAASMAGGEDEDERELSIRGLAAYQPYDGILALKMALAGFMRQI 212
Query: 119 RGGKARFDPDHIVLTAGATAANELLTFILANPGDALLIPTPYYPGFDRDLRWRTGVNIVP 178
G F+P +V+T+GAT A E+L+F LA+PG+A L+P+PYYPG+DRD++WRTG+ ++P
Sbjct: 213 MQGSVSFEPSQVVITSGATPAMEILSFCLADPGNAFLVPSPYYPGWDRDIKWRTGIELIP 272
Query: 179 VRCDSANGFQVTVXXXXXXXXXXXXVGMRARAVLITNPSNPLGTTVRRKMLDDILDFVSR 238
V C S + F +++ G++ R VLI+NP+NP G+ V ++ L D+L+F +
Sbjct: 273 VPCRSTDNFNISITALEIAYNQAKKRGIKVRGVLISNPNNPTGSFVPKQTLHDLLEFAAE 332
Query: 239 NDIHLISDEIYSGSVFAAPDLVSVAELVEARGGDGIAGRVHIVYSLSKDLGLPGFRVGVV 298
+IHLISDE+++GS + + VSVAE+V+ D GRVHI+Y LSKDL L GFRVGV+
Sbjct: 333 KNIHLISDEVFAGSTYGSGKFVSVAEVVDDL-EDFDKGRVHIIYGLSKDLSLAGFRVGVI 391
Query: 299 YSYNDAVVTAARRMSSFTLVSSQTQKTLAAMLSDEAFAGEYIRTNXXXXXXXXXXXXAGL 358
YSYN+++VTAA +++ F+ VS+ TQ+ L AMLSD+ F +Y++ N L
Sbjct: 392 YSYNESIVTAAAKIARFSSVSTPTQRLLVAMLSDQKFISDYLKVNRERLRKMYHLFVDAL 451
Query: 359 ARAGVPCLRGNAGLFVWMDMXXXXXXXXXXXXXXXXWEKLLRQAKLNISPGSSCHCSEAG 418
+ G+ C + + G + W DM W++LL +AK+N++PGSSCHC E G
Sbjct: 452 DQVGIECYKSSGGFYCWADM-SKFIRSYSEKGERKLWDRLLEEAKVNVTPGSSCHCIEPG 510
Query: 419 WFRVCFANMSLDTLDLALHRISRFMDT 445
WFR CF +S + + + R+ D+
Sbjct: 511 WFRCCFTTLSEHDIPVLVQRLRTITDS 537
>Z27243
Length = 124
Score = 118 bits (295), Expect = 1e-26, Method: Composition-based stats.
Identities = 61/125 (48%), Positives = 72/125 (57%), Gaps = 1/125 (0%)
Query: 295 VGVVYSYNDAVVTAARRMSSFTLVSSQTQKTLAAMLSDEAFAGEYIRTNXXXXXXXXXXX 354
VGVVYSYND VV+ ARRMSSF LVSSQTQ LAAMLSD++F ++
Sbjct: 1 VGVVYSYNDVVVSCARRMSSFGLVSSQTQSFLAAMLSDQSFVDNFLVEVSKRVAKRHHMF 60
Query: 355 XAGLARAGVPCLRGNAGLFVWMDMXXXXXXXXXXXXXXXXWEKLLRQAKLNISPGSSCHC 414
GL G+ CLR NAGLFV MD+ W + + K+N+SPGSS HC
Sbjct: 61 TEGLEEMGISCLRSNAGLFVLMDL-RHMLKDQTFDSEMALWRVTINKVKINVSPGSSFHC 119
Query: 415 SEAGW 419
SE GW
Sbjct: 120 SEPGW 124
>Z27244
Length = 124
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 70/125 (56%), Gaps = 1/125 (0%)
Query: 295 VGVVYSYNDAVVTAARRMSSFTLVSSQTQKTLAAMLSDEAFAGEYIRTNXXXXXXXXXXX 354
VG+VYSYND VV AR+MSSF LVSSQTQ +A MLSDE F E+IR +
Sbjct: 1 VGIVYSYNDRVVQIARKMSSFGLVSSQTQHLIAKMLSDEEFVDEFIRESKLRLAARHAEI 60
Query: 355 XAGLARAGVPCLRGNAGLFVWMDMXXXXXXXXXXXXXXXXWEKLLRQAKLNISPGSSCHC 414
GL G+ L+ AGLF+WMD+ W ++ Q KLN+SPG S HC
Sbjct: 61 TTGLDGLGIGWLKAKAGLFLWMDL-RNLLKTATFDSETELWRVIVHQVKLNVSPGGSFHC 119
Query: 415 SEAGW 419
E GW
Sbjct: 120 HEPGW 124
>Os01g0871300 1-aminocyclopropane-1-carboxylate synthase family protein
Length = 458
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 17/242 (7%)
Query: 103 GLKSFRKAMASFMGKIRGGKARFDPDHIVLTAGATAANELLTFILANPGDALLIPTPYYP 162
G RKA+ + + + G + PD ++++ GA + +PGD +LIP PY+
Sbjct: 119 GTLELRKAICNKLQEENG--ISYSPDQVLVSNGAKQCITQAVLAVCSPGDEVLIPAPYWV 176
Query: 163 GFDRDLRWRTGVNIVPVRCDSANGFQVTVXXXXXXXXXXXXVGMRARAVLITNPSNPLGT 222
+ ++ G V + + F + + ++R +++ +PSNP G+
Sbjct: 177 SYP-EMATLAGATPVILPTSISENFLL------RPELLASKINEKSRLLILCSPSNPTGS 229
Query: 223 TVRRKMLDDILDFVSRND-IHLISDEIYSGSVFAAPDLVSVAELVEARGGDGIAGRVHIV 281
+++L++I D V + + ++SDEIY ++ S A L G+ R V
Sbjct: 230 VYPKELLEEIADIVKKYPRLLVLSDEIYEHIIYQPAKHTSFASL------PGMWDRTLTV 283
Query: 282 YSLSKDLGLPGFRVGVVYSYNDAVVTAARRMSSFTL-VSSQTQKTLAAMLSDEAFAGEYI 340
SK + G+R+G + + V + S FT SS +QK A L+ GE +
Sbjct: 284 NGFSKAFAMTGWRLGYLAAPKHFVAACGKIQSQFTSGASSISQKAGLAALNLGYAGGEAV 343
Query: 341 RT 342
T
Sbjct: 344 ST 345
>Os07g0108300 Similar to Alanine aminotransferase
Length = 485
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 4/158 (2%)
Query: 98 FQDYHGLKSFRKAMASFMGKIRGGKARFDPDHIVLTAGAT-AANELLTFILANPGDALLI 156
+ D G+ RK +A F+ + G + DP+ I LT GA+ ++L I+ N D +L+
Sbjct: 110 YSDSRGIPGIRKEVAEFIERRDGYPS--DPELIYLTDGASKGVMQMLNTIIRNERDGILV 167
Query: 157 PTPYYPGFDRDLRWRTGVNIVPVRCDSANGFQVTVXXXXXXXXXXXXVGMRARAVLITNP 216
P P YP + + G ++VP + + + G+ RA++I NP
Sbjct: 168 PVPQYPLYSAAISLFGG-SLVPYYLEEEANWGLDFVNLRQTVASARSKGITVRAMVIINP 226
Query: 217 SNPLGTTVRRKMLDDILDFVSRNDIHLISDEIYSGSVF 254
NP G + + ++L F ++ L++DE+Y +++
Sbjct: 227 GNPTGQCLSEGNIKELLKFCFHENLVLLADEVYQQNIY 264
>Os09g0433900 Similar to Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)
(Glutamic--pyruvic transaminase 2) (Glutamic--alanine
transaminase 2) (ALAAT-2)
Length = 486
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 117/254 (46%), Gaps = 14/254 (5%)
Query: 93 RDNALFQDYHGLKSFRKAMASFMGKIRGGKARFDPDHIVLTAGATAA-NELLTFILANPG 151
RD+ + G++ R+A+A + G ++ PD+I LT GA++A N ++ ++ +
Sbjct: 111 RDSGSYTSSQGVRGLREAVADGIAARDGFPSK--PDNIFLTDGASSAINMMMQILIRSHE 168
Query: 152 DALLIPTPYYPGFDRDLRWRTGVNIVPVRCDSANGFQVTVXXXXXXXXXXXXVGMRARAV 211
D +L P P YP + + G +VP + + + + G+ RA+
Sbjct: 169 DGILCPLPEYPLYSASIILHGG-TMVPYNLTEDSIWGLEIFEVKRCLEDARASGLTIRAM 227
Query: 212 LITNPSNPLGTTVRRKMLDDILDFVSRNDIHLISDEIYSGSVFAA-PDLVSVAELVEARG 270
++ NP NP G + ++I++F + + +++DE+Y +V+ S ++ + G
Sbjct: 228 VVINPGNPTGQVLSITNQEEIVEFCRKEGLVILADEVYQENVYTENKRFNSFKKVARSLG 287
Query: 271 GDGIAGRVHIVYSLSKD-LGLPGFRVGV--VYSYNDAVVTAARRMSSFTLVSSQTQKTLA 327
D + +S+S G G R G + + D V+ +++S T+ + + L
Sbjct: 288 YDHHDLSIVSFHSVSMGYYGECGRRGGYMEICGFGDDVIDEMYKLASLTICPNIAGQILI 347
Query: 328 AM------LSDEAF 335
++ L DEAF
Sbjct: 348 SLVMDPPKLGDEAF 361
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.137 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,894,199
Number of extensions: 533914
Number of successful extensions: 1150
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 1132
Number of HSP's successfully gapped: 11
Length of query: 461
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 357
Effective length of database: 11,605,545
Effective search space: 4143179565
Effective search space used: 4143179565
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)