BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0150200 Os01g0150200|AK099465
(221 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0150200 Protein tyrosine phosphatase-like protein, PTP... 428 e-120
Os04g0271200 Silent information regulator protein Sir2 fami... 418 e-117
Os01g0150800 Protein tyrosine phosphatase-like protein, PTP... 300 4e-82
Os01g0150500 Protein tyrosine phosphatase-like protein, PTP... 295 1e-80
Os08g0393600 Protein tyrosine phosphatase-like protein, PTP... 90 1e-18
Os05g0460800 Protein tyrosine phosphatase-like protein, PTP... 79 3e-15
>Os01g0150200 Protein tyrosine phosphatase-like protein, PTPLA family protein
Length = 221
Score = 428 bits (1100), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/211 (100%), Positives = 211/211 (100%)
Query: 1 MTGVGSAVRRLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEAVYAAVERPLQFAQTAAFL 60
MTGVGSAVRRLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEAVYAAVERPLQFAQTAAFL
Sbjct: 1 MTGVGSAVRRLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEAVYAAVERPLQFAQTAAFL 60
Query: 61 EILHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPETHSHILVTSLVISWSITEIIRYS 120
EILHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPETHSHILVTSLVISWSITEIIRYS
Sbjct: 61 EILHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPETHSHILVTSLVISWSITEIIRYS 120
Query: 121 FFGMKETFGFAPSWLLWLRYSTFMVLYPTGISSEVGLIYIALPYMKATEKYCLRMPNKWN 180
FFGMKETFGFAPSWLLWLRYSTFMVLYPTGISSEVGLIYIALPYMKATEKYCLRMPNKWN
Sbjct: 121 FFGMKETFGFAPSWLLWLRYSTFMVLYPTGISSEVGLIYIALPYMKATEKYCLRMPNKWN 180
Query: 181 FSFDFSYASILSLAVYVPGSPHMFTYMLAQR 211
FSFDFSYASILSLAVYVPGSPHMFTYMLAQR
Sbjct: 181 FSFDFSYASILSLAVYVPGSPHMFTYMLAQR 211
>Os04g0271200 Silent information regulator protein Sir2 family protein
Length = 221
Score = 418 bits (1074), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/211 (97%), Positives = 208/211 (98%)
Query: 1 MTGVGSAVRRLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEAVYAAVERPLQFAQTAAFL 60
M GVGSAVRRLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEAVYAAVERPLQFAQTAAFL
Sbjct: 1 MAGVGSAVRRLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEAVYAAVERPLQFAQTAAFL 60
Query: 61 EILHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPETHSHILVTSLVISWSITEIIRYS 120
EILHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPETHSHILVTSLVISWSITEIIRYS
Sbjct: 61 EILHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPETHSHILVTSLVISWSITEIIRYS 120
Query: 121 FFGMKETFGFAPSWLLWLRYSTFMVLYPTGISSEVGLIYIALPYMKATEKYCLRMPNKWN 180
FFGMKE FGFAPSWLLWLRYSTFMVLYPTGISSEVGLIYIALPYMKA+EKYCLRMPNKWN
Sbjct: 121 FFGMKEAFGFAPSWLLWLRYSTFMVLYPTGISSEVGLIYIALPYMKASEKYCLRMPNKWN 180
Query: 181 FSFDFSYASILSLAVYVPGSPHMFTYMLAQR 211
FSFDF YASILSLA+YVPGSPHMFTYMLAQR
Sbjct: 181 FSFDFFYASILSLAIYVPGSPHMFTYMLAQR 211
>Os01g0150800 Protein tyrosine phosphatase-like protein, PTPLA family protein
Length = 225
Score = 300 bits (769), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 141/209 (67%), Positives = 170/209 (81%)
Query: 3 GVGSAVRRLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEAVYAAVERPLQFAQTAAFLEI 62
G+ S +RRLYLSVYNW VF GW QV + + LLE +EAVYAAVE+ L FAQTAA +EI
Sbjct: 7 GMASVLRRLYLSVYNWIVFIGWVQVSWSMILALLEKRYEAVYAAVEQHLLFAQTAAIMEI 66
Query: 63 LHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPETHSHILVTSLVISWSITEIIRYSFF 122
LH +VGLVRSPVS+TLPQI +RLF+ WGIL SFPE H+HI VTSL+ISW ITE+ RYSF
Sbjct: 67 LHSIVGLVRSPVSSTLPQITARLFMIWGILRSFPEIHTHIFVTSLLISWCITEVTRYSFN 126
Query: 123 GMKETFGFAPSWLLWLRYSTFMVLYPTGISSEVGLIYIALPYMKATEKYCLRMPNKWNFS 182
GMKE+FGF PSWLLWLRYSTF+V +P G+ SEVGL+YI +P+MKA+EKYCLRMPNKWNFS
Sbjct: 127 GMKESFGFTPSWLLWLRYSTFIVCFPIGMVSEVGLVYIVVPFMKASEKYCLRMPNKWNFS 186
Query: 183 FDFSYASILSLAVYVPGSPHMFTYMLAQR 211
+ YAS+ +A+Y P PH+F Y++ QR
Sbjct: 187 IKYFYASVFFMALYAPVYPHLFHYLIVQR 215
>Os01g0150500 Protein tyrosine phosphatase-like protein, PTPLA family protein
Length = 234
Score = 295 bits (756), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 142/224 (63%), Positives = 168/224 (75%), Gaps = 13/224 (5%)
Query: 1 MTGVGSAVRRLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEAVYAAVERPLQFAQTAAFL 60
M GS VRRLYLS+YNW F GWAQVL Y LL+ GHEAVYAA+ERPL F QTAA L
Sbjct: 1 MAADGSMVRRLYLSIYNWVAFIGWAQVLCYMTLALLDKGHEAVYAAIERPLLFTQTAAIL 60
Query: 61 EILH-------------GLVGLVRSPVSATLPQIGSRLFLTWGILWSFPETHSHILVTSL 107
E+L L GLVRSPVS+TLPQI RLF+TWGILWSFPET S+I VTSL
Sbjct: 61 EVLVFPSSLPLFIRENWRLRGLVRSPVSSTLPQITGRLFITWGILWSFPETQSYIFVTSL 120
Query: 108 VISWSITEIIRYSFFGMKETFGFAPSWLLWLRYSTFMVLYPTGISSEVGLIYIALPYMKA 167
+I W I E+ RYSF+GMKE+FGF PSWLLWLRYSTF+ +P G+ SE+ L Y LP+MKA
Sbjct: 121 LICWCIIEVTRYSFYGMKESFGFTPSWLLWLRYSTFIACFPVGVVSEICLAYTVLPFMKA 180
Query: 168 TEKYCLRMPNKWNFSFDFSYASILSLAVYVPGSPHMFTYMLAQR 211
+EKYCLRMPNKWNFSF++ YA++ +A YVP P++F +M+AQR
Sbjct: 181 SEKYCLRMPNKWNFSFNYFYANVFFMAFYVPVVPYLFHHMIAQR 224
>Os08g0393600 Protein tyrosine phosphatase-like protein, PTPLA family protein
Length = 115
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 53/72 (73%)
Query: 1 MTGVGSAVRRLYLSVYNWAVFFGWAQVLYYAVTTLLESGHEAVYAAVERPLQFAQTAAFL 60
M G S +RRLYLS YNW VF GW QV + + LLE+G+EAVYAAVE+ L FAQTAA +
Sbjct: 32 MAGNASVMRRLYLSFYNWIVFIGWVQVSWSMILALLENGYEAVYAAVEQHLLFAQTAAIM 91
Query: 61 EILHGLVGLVRS 72
EILH +VG + S
Sbjct: 92 EILHSIVGEISS 103
>Os05g0460800 Protein tyrosine phosphatase-like protein, PTPLA family protein
Length = 219
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 94/192 (48%), Gaps = 12/192 (6%)
Query: 10 RLYLSVYNWAVFFGWAQVLYYAVTTLLE-SGHEAVYAAVERPLQFAQTAAFLEILHGLVG 68
+LYL YN GW L + L S + YA + QT A LE +H +G
Sbjct: 6 QLYLLSYNSVQALGWFVALLRLLPCLAPPSSVHSSYAVAGDLVCLLQTWAILETIHAAIG 65
Query: 69 LVR-SPVSATLPQIGSRLFLTWGILWSFPETHSHILVTSLVISWSITEIIRYSFFGMKET 127
LV SP+ A L Q G R ++ PE S V ++WSI+E+IRYS + + T
Sbjct: 66 LVHTSPLLAFL-QWGGRTHFVLAVVRQIPEVQSSPSVFITFMAWSISEVIRYSHYAL-TT 123
Query: 128 FGFAPSWLLWLRYSTFMVLYPTGIS-SEVGLIYIALPYMKATEKYCLRMPNKWNFSFDFS 186
P WL +LRY+ F+ LYP G+ E+ +Y ALP++K + Y + + F S
Sbjct: 124 LKVCPPWLTYLRYTAFIPLYPIGVGPGEMWTMYQALPFVKERKLY-----SGFFGKFSMS 178
Query: 187 YASIL--SLAVY 196
Y S L LAVY
Sbjct: 179 YHSFLVAVLAVY 190
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.327 0.138 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,874,673
Number of extensions: 259200
Number of successful extensions: 592
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 590
Number of HSP's successfully gapped: 6
Length of query: 221
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 124
Effective length of database: 11,971,043
Effective search space: 1484409332
Effective search space used: 1484409332
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 154 (63.9 bits)