Os01g0150500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein tyrosine phosphatase-like protein, PTPLA family protein.
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Os01g0150500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein tyrosine phosphatase-like protein, PTPLA family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 313.63 | 0.832 | 3.23 | -1.28 | 0.0866 | -0.189 | -0.244 | -4.04 | -0.204 | 6.6 | 25.9 | 1585 | -- | -- |
| 325.76 | 0.841 | 3.13 | -0.149 | 0.0917 | -0.536 | -0.142 | -- | 0.00987 | 7.08 | 29.7 | 3592 | -- | -- |
| 313.72 | 0.825 | 3.23 | -1.28 | 0.0809 | -0.196 | -- | -4.06 | -0.198 | 7.84 | 25.91 | 1585 | -- | -- |
| 325.71 | 0.841 | 3.13 | -0.114 | 0.0772 | -0.527 | -- | -- | 0.00249 | 6.36 | 29.6 | 3592 | -- | -- |
| 314.16 | 0.826 | 3.23 | -1.26 | -- | -0.202 | -- | -3.98 | -0.193 | -- | 25.97 | 1585 | -- | -- |
| 333.92 | 0.857 | 3.12 | -0.25 | 0.0795 | -- | 0.162 | -- | 0.0335 | 10.2 | -- | -- | -- | -- |
| 333.96 | 0.856 | 3.12 | -0.245 | 0.0885 | -- | -- | -- | 0.033 | 8.64 | -- | -- | -- | -- |
| 325.49 | 0.84 | 3.09 | -0.079 | -- | -0.469 | -- | -- | 0.155 | -- | 26.58 | 1976 | -- | -- |
| 326.03 | 0.841 | 3.12 | -- | 0.0677 | -0.546 | -- | -- | 0.0161 | 6.65 | 29.61 | 3614 | -- | -- |
| 334.4 | 0.854 | 3.12 | -0.245 | -- | -- | -- | -- | 0.0338 | -- | -- | -- | -- | -- |
| 335.55 | 0.857 | 3.11 | -- | 0.0878 | -- | -- | -- | 0.0603 | 8.85 | -- | -- | -- | -- |
| 325.6 | 0.84 | 3.09 | -- | -- | -0.491 | -- | -- | 0.173 | -- | 26.55 | 1976 | -- | -- |
| 335.99 | 0.856 | 3.12 | -- | -- | -- | -- | -- | 0.0609 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 302.85 | humidity | 80 | 90 | < th | dose independent | rect. | 1 | 4 |
| 2 | 303.07 | humidity | 80 | 270 | < th | dose dependent | rect. | 24 | 2 |
| 3 | 303.08 | humidity | 80 | 270 | < th | dose independent | rect. | 24 | 2 |
| 4 | 303.13 | humidity | 80 | 90 | < th | dose dependent | rect. | 1 | 4 |
| 14 | 304.92 | temperature | 20 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 16 | 304.93 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 3 |
| 25 | 305.36 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 4 |
| 60 | 307.60 | humidity | 80 | 10 | < th | dose dependent | rect. | 24 | 5 |
| 144 | 310.46 | temperature | 20 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 163 | 311.18 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 189 | 311.88 | temperature | 15 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 218 | 312.32 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 3 |
| 221 | 312.33 | temperature | 25 | 4320 | < th | dose dependent | rect. | 24 | 1 |
| 307 | 313.12 | temperature | 20 | 4320 | > th | dose independent | sin | 14 | NA |
| 313 | 313.16 | temperature | 20 | 4320 | < th | dose independent | sin | 13 | NA |
| 322 | 313.23 | wind | 7 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 353 | 313.40 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 9 |
| 397 | 313.53 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 14 |
| 410 | 313.56 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 16 |
| 537 | 313.98 | temperature | 15 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 547 | 314.00 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 568 | 314.04 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 569 | 314.05 | temperature | 25 | 1440 | > th | dose independent | rect. | 12 | 10 |
| 588 | 314.09 | temperature | 25 | 1440 | > th | dose independent | rect. | 14 | 8 |
| 627 | 314.15 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 655 | 314.19 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 710 | 314.27 | humidity | 50 | 10 | < th | dose independent | rect. | 11 | 1 |
| 720 | 314.27 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 804 | 314.27 | humidity | 50 | 10 | < th | dose dependent | rect. | 11 | 1 |