BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0147700 Os01g0147700|AK066686
(700 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0147700 Region of unknown function, putative Zinc fing... 1004 0.0
Os01g0633200 Similar to X1 (Fragment) 324 2e-88
Os01g0126600 Similar to X1 (Fragment) 270 4e-72
Os05g0153200 Region of unknown function, putative Zinc fing... 254 1e-67
Os01g0147400 Region of unknown function XH domain containin... 181 2e-45
Os03g0596400 Region of unknown function XH domain containin... 140 3e-33
Os12g0572500 Region of unknown function XH domain containin... 113 5e-25
Os07g0113100 87 4e-17
Os02g0539700 84 2e-16
Os02g0293300 Region of unknown function XH domain containin... 69 1e-11
>Os01g0147700 Region of unknown function, putative Zinc finger, XS and XH domain
containing protein
Length = 700
Score = 1004 bits (2597), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/700 (73%), Positives = 516/700 (73%)
Query: 1 MDLYMDDYIDPYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSYGLLR 60
MDLYMDDYIDPY RSYGLLR
Sbjct: 1 MDLYMDDYIDPYEEAEAEAAAEAAGLTSAAAAEDSSDEGDSEDDSEAESDYEERSYGLLR 60
Query: 61 SGNHRVRNPDGTFRCPFCPGXXXXXXXXXXXXXHADGIGASSKXXXXXXXXXXXXXXXXX 120
SGNHRVRNPDGTFRCPFCPG HADGIGASSK
Sbjct: 61 SGNHRVRNPDGTFRCPFCPGKKKQDYKLKDLLQHADGIGASSKRRRHGRERAFHRAFARF 120
Query: 121 XXTDPSFAQDLAAINGIATTADAISNSSAAGAKEKADANGDTDXXXXXXXXXXXNRREEE 180
TDPSFAQDLAAINGIATTADAISNSSAAGAKEKADANGDTD NRREEE
Sbjct: 121 VRTDPSFAQDLAAINGIATTADAISNSSAAGAKEKADANGDTDGSASVAAVAAGNRREEE 180
Query: 181 RFAWPWSGVLAAGAGFNAEDFADRVAMFGXXXXXXXXXXXAEGADSFAIVRFANGWGGFG 240
RFAWPWSGVLAAGAGFNAEDFADRVAMFG AEGADSFAIVRFANGWGGFG
Sbjct: 181 RFAWPWSGVLAAGAGFNAEDFADRVAMFGLDDVVPLVVDDAEGADSFAIVRFANGWGGFG 240
Query: 241 DALTLENHFNKNKLGKNEWDARGSXXXXXXXXXXXXXXXXYGWVAREGDYNAGNVVGRYL 300
DALTLENHFNKNKLGKNEWDARGS YGWVAREGDYNAGNVVGRYL
Sbjct: 241 DALTLENHFNKNKLGKNEWDARGSAGDAVKGDDGDTDVKVYGWVAREGDYNAGNVVGRYL 300
Query: 301 RKHTNLTTIDEVXXXXXXXXGKMVAILATQIEAKNRFLQDLETKKNATELSIARLEEDNR 360
RKHTNLTTIDEV GKMVAILATQIEAKNRFLQDLETKKNATELSIARLEEDNR
Sbjct: 301 RKHTNLTTIDEVSKSESEKSGKMVAILATQIEAKNRFLQDLETKKNATELSIARLEEDNR 360
Query: 361 KLHDAYNEEMRNLHRRARDYALRVFQDNENLKLELDSRRRELNSRAKQLEKITAENASXX 420
KLHDAYNEEMRNLHRRARDYALRVFQDNENLKLELDSRRRELNSRAKQLEKITAENAS
Sbjct: 361 KLHDAYNEEMRNLHRRARDYALRVFQDNENLKLELDSRRRELNSRAKQLEKITAENASDR 420
Query: 421 XXXXXXXXXXXXXNSELELASIEQQRADEDVMKLVEDQKREKEDVLARMXXXXXXXXXXX 480
NSELELASIEQQRADEDVMKLVEDQKREKEDVLARM
Sbjct: 421 KKLDDQKQKAKDDNSELELASIEQQRADEDVMKLVEDQKREKEDVLARMLQLEKELHEKQ 480
Query: 481 XXXXXVTRLNGTLQVMKHLEGDDDGDIHDKMXXXXXXXXXXXXXXXXXXGELVKKERESN 540
VTRLNGTLQVMKHLEGDDDGDIHDKM GELVKKERESN
Sbjct: 481 QLELEVTRLNGTLQVMKHLEGDDDGDIHDKMEKLSERLEHEKKRLEELSGELVKKERESN 540
Query: 541 DELQEARKELIMGLEDMLTGRTAIGIKRMGELDEKPFQNACKRKYGNDDYETKAAELVSS 600
DELQEARKELIMGLEDMLTGRTAIGIKRMGELDEKPFQNACKRKYGNDDYETKAAELVSS
Sbjct: 541 DELQEARKELIMGLEDMLTGRTAIGIKRMGELDEKPFQNACKRKYGNDDYETKAAELVSS 600
Query: 601 WQEEIKKPSWHPYKIIXXXXXXXXXXXXXXXXLRHLWIEYGDDVCNAVKTALSEVNEYNA 660
WQEEIKKPSWHPYKII LRHLWIEYGDDVCNAVKTALSEVNEYNA
Sbjct: 601 WQEEIKKPSWHPYKIITVDGEDKEVVDDDDTKLRHLWIEYGDDVCNAVKTALSEVNEYNA 660
Query: 661 SGRYVVPELWNFRKGRKATMKEVLKYIFGQIETTSKRRRP 700
SGRYVVPELWNFRKGRKATMKEVLKYIFGQIETTSKRRRP
Sbjct: 661 SGRYVVPELWNFRKGRKATMKEVLKYIFGQIETTSKRRRP 700
>Os01g0633200 Similar to X1 (Fragment)
Length = 629
Score = 324 bits (830), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 209/656 (31%), Positives = 319/656 (48%), Gaps = 63/656 (9%)
Query: 56 YGLLRSGNHRVRNPDG-TFRCPFCPGXXXXXXXXXXXXXHADGIGASSKXXXXXXXXXXX 114
Y L +G +V+ DG ++ CPFC G HA G+GA+S
Sbjct: 24 YARLVAGEFKVK--DGQSYSCPFCSGKKKKDFNINNLIQHASGVGAAS------------ 69
Query: 115 XXXXXXXXTDPSFAQDLAAINGIATTADAISNSSAAGAKEKADANGDTDXXXXXXXXXXX 174
T + A+ L NG+ T + S A + + N D
Sbjct: 70 NRQAKDKATHRALAKHLK--NGL--TKSSGQQSQTAVVEPQPLPNRD------------- 112
Query: 175 NRREEERFAWPWSGVLA---------AGAGFNAEDFADRVAMFGXXXXXXXXXXXAEGAD 225
E+F WPW GVL G + ++++ F G
Sbjct: 113 -----EKFVWPWMGVLVNVPTEWKDGRQIGRSGNHLKEQLSRFCPLKIIPLWNFR--GHS 165
Query: 226 SFAIVRFANGWGGFGDALTLENHFNKNKLGKNEWDARGSXXXXXXXXXXXXXXXXYGWVA 285
AIV F W GF +AL E++F K G+ +W + + +GWVA
Sbjct: 166 GNAIVEFGKDWHGFRNALAFEDYFGKEGYGRRDWKEKQNQGSNL-----------FGWVA 214
Query: 286 REGDYNAGNVVGRYLRKHTNLTTIDEVXXXXXXXXGKMVAILATQIEAKNRFLQDLETKK 345
R D+ + ++G +LRK+ +L TI+++ K+VA LA QIE KNR LQ+LE
Sbjct: 215 RAEDHTSPGLIGDHLRKNGDLKTINDLENEGARKTDKLVANLANQIEVKNRHLQELEVTY 274
Query: 346 NATELSIARLEEDNRKLHDAYNEEMRNLHRRARDYALRVFQDNENLKLELDSRRRELNSR 405
N S+ ++ +L YNEE+R + + A+ ++ ++ +N+ L+ EL+S+ ELN+R
Sbjct: 275 NERTTSLEKMMGQREQLLQKYNEEIRKMQQLAQRHSQKIIDENQKLRSELESKMSELNTR 334
Query: 406 AKQLEKITAENASXXXXXXXXXXXXXXXNSELELASIEQQRADEDVMKLVEDQKREKEDV 465
+K+L++I A++ +S L+LA++EQ+RADE+V+KLV + KREKE
Sbjct: 335 SKELDEIAAKSDYDRRIIDQEKQKNAIKSSHLKLATLEQERADENVLKLVREHKREKEAA 394
Query: 466 LARMXXXXXXXXXXXXXXXXVTRLNGTLQVMKHLEGDDDGDIH---DKMXXXXXXXXXXX 522
+ ++ + +L G L+VMKH+ GD+D + D++
Sbjct: 395 VKKILKLEQQVDAKQKLELDIQQLKGKLEVMKHMPGDEDSALKNKIDELSEELQEKMDEL 454
Query: 523 XXXXXXXGELVKKERESNDELQEARKELIMGLEDMLTGRTAIGIKRMGELDEKPFQNACK 582
LV KER+SN E+Q+ARKEL GL D+L G++ IGIKRMGELD + F AC+
Sbjct: 455 DAMESLNQTLVIKERKSNTEMQDARKELENGLLDLLDGQSHIGIKRMGELDLEAFSKACR 514
Query: 583 RKYGNDDYETKAAELVSSWQEEIKKPSWHPYKIIXXXXXXXXXXXXXXXXLRHLWIEYGD 642
+ +D E AA L S WQ EIK P WHP++ + L+ L E+G+
Sbjct: 515 KMSSEEDAEITAAILCSKWQAEIKNPDWHPFRFV-LVDGQEKEIIEDDAKLQELKEEHGE 573
Query: 643 DVCNAVKTALSEVNEYNASGRYVVPELWNFRKGRKATMKEVLKYIFGQIETTSKRR 698
D+ V+ AL E+NEYN SGR+ V ELWNF+ RKAT+KE ++++ Q ++R
Sbjct: 574 DIYRLVRDALCEINEYNPSGRFPVGELWNFKDKRKATLKETVQFVLRQWRANRRKR 629
>Os01g0126600 Similar to X1 (Fragment)
Length = 403
Score = 270 bits (689), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 151/404 (37%), Positives = 232/404 (57%), Gaps = 5/404 (1%)
Query: 299 YLRKHTNLTTIDEVXXXXXXXXGKMVAILATQIEAKNRFLQDLETKKNATELSIARLEED 358
YLRK+ +L T+ ++ K+VA LA+Q+E K R +++LE++ N T S+ R+ E
Sbjct: 1 YLRKNGDLKTVADLENEGTRKTDKLVANLASQVEVKKRHVEELESQYNETTASLERVMEQ 60
Query: 359 NRKLHDAYNEEMRNLHRRARDYALRVFQDNENLKLELDSRRRELNSRAKQLEKITAENAS 418
+ AYNEE+R + A ++ R+ +N+ L+ +L+S+ + L+SR+K+L+K+ ++ S
Sbjct: 61 REQQLQAYNEEIRKMQDLALRHSQRIMDENKKLRSDLESKMQLLDSRSKELDKLAVQSNS 120
Query: 419 XXXXXXXXXXXXXXXNSELELASIEQQRADEDVMKLVEDQKREKEDVLARMXXXXXXXXX 478
L++A++EQQ+ADE V+KLVE+ KREK+ L ++
Sbjct: 121 DRMNLEKEKEKNDIKTKHLKMATLEQQKADESVLKLVEEHKREKQAALDKILKLEQQLNA 180
Query: 479 XXXXXXXVTRLNGTLQVMKHLEGDDDGD----IHDKMXXXXXXXXXXXXXXXXXXGELVK 534
+ +L G L+VMKH+ G +D + IH+ + LV
Sbjct: 181 KQKLELEIQQLQGKLEVMKHMPGKEDSEAKSKIHE-LSEELKDKYAEMESIESLNQALVI 239
Query: 535 KERESNDELQEARKELIMGLEDMLTGRTAIGIKRMGELDEKPFQNACKRKYGNDDYETKA 594
KER+SNDELQ ARK LI G +D++ GRT IGIKRMG +D K F NA K++ +D + A
Sbjct: 240 KERQSNDELQHARKVLIEGFQDIIVGRTNIGIKRMGVIDFKAFTNAYKQRSLEEDADVSA 299
Query: 595 AELVSSWQEEIKKPSWHPYKIIXXXXXXXXXXXXXXXXLRHLWIEYGDDVCNAVKTALSE 654
AEL S W+ EIK WHP++++ L L E+G+++C V AL E
Sbjct: 300 AELCSLWENEIKNSDWHPFRVVMVDGKEMEILSEDDGKLCELKEEHGEEICAMVTKALLE 359
Query: 655 VNEYNASGRYVVPELWNFRKGRKATMKEVLKYIFGQIETTSKRR 698
+NEYN SGRY VPELWNF++ RKAT+KEV++Y+ Q + ++R
Sbjct: 360 LNEYNPSGRYPVPELWNFKENRKATLKEVVQYVLNQWKKNKRKR 403
>Os05g0153200 Region of unknown function, putative Zinc finger, XS and XH domain
containing protein
Length = 617
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 170/580 (29%), Positives = 269/580 (46%), Gaps = 29/580 (5%)
Query: 135 NGIATTADAISNSSAAGAKEKADANG------DTDXXXXXXXXXXXNRREEERFAWPWSG 188
+G+ A A+ ++ AKEKA+ D + + F WPW G
Sbjct: 51 HGLLQHALAVGSADDRPAKEKANHRALALHLKDDTAESSRPLSQPPQHSKNDLFVWPWMG 110
Query: 189 VLAAGAGFNAEDFADRVA-MFGXXXXXXXXXXXAEGADS-FAIVRFANGWGGFGDALTLE 246
++ A+R+ F ++G S AI+ F W F +AL E
Sbjct: 111 IIVNMPAEYVGKSANRLKEHFSCYHPSKVYSVYSKGRPSGNAIIEFGKDWSSFRNALQFE 170
Query: 247 NHFNKNKLGKNEW--DARGSXXXXXXXXXXXXXXXXYGWVAREGDYNAGNVVGRYLRKHT 304
+ F K GK W RG +GW+AR DYN+ +G +L+++
Sbjct: 171 SEFEKKGCGKKAWLDSGRGGPEP-------------FGWIARADDYNSSGPIGEHLKRNG 217
Query: 305 NLTTIDEVXXXXXXXXGKMVAILATQIEAKNRFLQDLETKKNATELSIARLEEDNRKLHD 364
+L T+ +V K++A LA Q++ K L+ L++ + LS+ ++ E +
Sbjct: 218 DLKTVSDVENEGTVKTDKLMASLACQVKEKEIHLEKLQSVYDERYLSLGKMMESRENMLK 277
Query: 365 AYNEEMRNLHRRARDYALRVFQDNENLKLELDSRRRELNSRAKQLEKITAENASXXXXXX 424
+ N E++ + + A + A R +N+ L+L L S EL++ K+LE++TA+ S
Sbjct: 278 SCNTEIQKMQQLAYEQAQRTVDENQKLRLNLQSMMHELDANCKRLEELTAQADSDKRNLE 337
Query: 425 XXXXXXXXXNSELELASIEQQRADEDVMKLVEDQKREKEDVLARMXXXXXXXXXXXXXXX 484
L LA +EQQ+AD +V++LVE+ REKE L
Sbjct: 338 VLMQKNAKKADHLRLAELEQQKADGNVLRLVEEHNREKEATLNSNMRLHEQLDRKQKLEL 397
Query: 485 XVTRLNGTLQVMKHLEGDDDGDIH---DKMXXXXXXXXXXXXXXXXXXGELVKKERESND 541
+ L G LQV KH +G +D D+ + + L+ KE+ S D
Sbjct: 398 EIAHLKGKLQVTKHTQGTEDSDLEKTIEALTNELEEKIEDMNYMDNMNQTLILKEKRSKD 457
Query: 542 ELQEARKELIMGLEDM---LTGRTAIGIKRMGELDEKPFQNACKRKYGNDDYETKAAELV 598
ELQEARK +I L+ + + + IGIKR+GELD K F +AC+R++ D E +++ L
Sbjct: 458 ELQEARKLVIDSLQRLPSDIRSQAQIGIKRIGELDLKVFSDACRRRFSEDFAEVESSVLC 517
Query: 599 SSWQEEIKKPSWHPYKIIXXXXXXXXXXXXXXXXLRHLWIEYGDDVCNAVKTALSEVNEY 658
S WQ EIK P WHP+K + L+ L EYG +V +AV AL E++ +
Sbjct: 518 SKWQNEIKDPEWHPFKSVWVNGKESKVIREDDEKLQQLKEEYGQEVYDAVTNALFELDMH 577
Query: 659 NASGRYVVPELWNFRKGRKATMKEVLKYIFGQIETTSKRR 698
+ GR ELWN+ +GRKA +EV++ + + T +RR
Sbjct: 578 SIGGRDPFLELWNYEEGRKAGTREVIQQVIKLYKATKRRR 617
>Os01g0147400 Region of unknown function XH domain containing protein
Length = 411
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 144/253 (56%), Gaps = 3/253 (1%)
Query: 446 RADEDVMKLVEDQKREKEDVLARMXXXXXXXXXXXXXXXXVTRLNGTLQVMKHLEGDDDG 505
R+ EDV + ++ +++ E + A++ + ++N LQ L +D
Sbjct: 158 RSAEDVER--DEGRQDMEAIYAKLNQLEKQLEQRQSLESIIRQMNMNLQAGGSLRKEDHE 215
Query: 506 DIHDKMXXXXXXXXXXXXXXXXXXGELVKKERESNDELQEARKELIMGLEDMLTGRTAIG 565
I+ M E++K+ R ++DEL+E R+ELI G+E+M + I
Sbjct: 216 HIYSIMICLRTIVDEEKEMLVDSCAEIMKRLRTNSDELKEYRQELIKGVENMTITTSTII 275
Query: 566 I-KRMGELDEKPFQNACKRKYGNDDYETKAAELVSSWQEEIKKPSWHPYKIIXXXXXXXX 624
KRMGELDE+PF ACKRK+ DD KAA L+S WQEE+K PSWHP+KII
Sbjct: 276 GIKRMGELDERPFHLACKRKHREDDPRGKAAMLISYWQEELKNPSWHPFKIIQVDGEDKG 335
Query: 625 XXXXXXXXLRHLWIEYGDDVCNAVKTALSEVNEYNASGRYVVPELWNFRKGRKATMKEVL 684
LR L +YGD VCNAVK A++E+NEYN GR+ + ELWNFR+GRKAT KEV+
Sbjct: 336 VVDEDDQKLRQLCKDYGDSVCNAVKAAMAELNEYNPRGRHTMNELWNFREGRKATTKEVV 395
Query: 685 KYIFGQIETTSKR 697
KYI Q++T S +
Sbjct: 396 KYISDQLKTNSSQ 408
>Os03g0596400 Region of unknown function XH domain containing protein
Length = 163
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 88/147 (59%), Gaps = 2/147 (1%)
Query: 551 IMGLEDMLTGRTAIGIKRMGELDEKPFQNACKRKYGNDDYETKAAELVSSWQEEIKKPSW 610
+ GLE M R+ IG+KRMGELD+K F NACK K N+ + K A + S W++EI KP W
Sbjct: 17 VQGLEKMAGVRSIIGVKRMGELDQKAFYNACKNKMPNN--KMKLALVCSKWEDEITKPEW 74
Query: 611 HPYKIIXXXXXXXXXXXXXXXXLRHLWIEYGDDVCNAVKTALSEVNEYNASGRYVVPELW 670
HP+K+I L+ L +YGD+ CN V AL E+NEYN SG Y VPELW
Sbjct: 75 HPFKVIETAGQTKEIIKEDDGKLQALRAQYGDEACNVVVKALVEMNEYNPSGMYPVPELW 134
Query: 671 NFRKGRKATMKEVLKYIFGQIETTSKR 697
NF++ R A M E Y+ Q +T KR
Sbjct: 135 NFKQNRSAPMPEAASYLLKQWKTHKKR 161
>Os12g0572500 Region of unknown function XH domain containing protein
Length = 377
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 99/173 (57%), Gaps = 7/173 (4%)
Query: 530 GELVKKERESNDELQEARKELIMGLEDMLTGRTAIGIKRMGELDEKPFQNACKRKYGNDD 589
G LV K +D+L+ R+ELI G D+ G +GIK MG+L+EK FQ AC K ++
Sbjct: 205 GALVSK----DDDLEAVREELIKGFLDIDNGGRKLGIKEMGQLNEKVFQIACLAKLPPEE 260
Query: 590 YETKAAELVSSWQEEIKKPSWHPYKIIXXXXXXXXXXXXXXXXLRHLWIEYGDDVCNAVK 649
+ EL SSWQ+++ SW+P+K I L+ L +YG+ AV
Sbjct: 261 VGEASYELYSSWQKQLSDLSWNPFKTITVDGNGKEIVNVDDEKLQELKRDYGEGAHKAVM 320
Query: 650 TALSEVNEYNA-SGRYVVPELWNFRKGRKATMKEVLKYIFGQIE--TTSKRRR 699
AL E+ EYN + R + ELWN++ GRKAT++E ++Y+ Q++ T +KRR+
Sbjct: 321 NALMEMKEYNVLADRSIAYELWNYKDGRKATLRECVEYVCNQVKQLTVTKRRK 373
>Os07g0113100
Length = 208
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 65/129 (50%), Gaps = 14/129 (10%)
Query: 488 RLNGTLQVMKHLEGDDDGDIHDKMXXXXXXXXXXXXXXXXXXGELVKKERESNDELQEAR 547
++ G K L DDD D KM E + + NDELQ R
Sbjct: 39 KMQGIAATSKKLNQDDDDDTKSKMTDEMPAM------------ESLNQAPAINDELQAIR 86
Query: 548 KELIMGLEDMLTGRTAIGIKRMGELDEKPFQNACKRKYGNDDYETKAAELVSSWQEEIKK 607
K+LI LE++ +GR +IGI+RMGELD K F NAC + ++ A L S W+ EI
Sbjct: 87 KQLIHALEELTSGRASIGIRRMGELDPKAFANACTQTLTKKQLDS--ALLYSKWEAEISD 144
Query: 608 PSWHPYKII 616
SWHP+++I
Sbjct: 145 SSWHPFRVI 153
>Os02g0539700
Length = 288
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 43/73 (58%)
Query: 254 LGKNEWDARGSXXXXXXXXXXXXXXXXYGWVAREGDYNAGNVVGRYLRKHTNLTTIDEVX 313
LGK W ARGS YGWVAREGDYNAGNVVGRYLRKHTNLTTI EV
Sbjct: 23 LGKKGWVARGSAGDAVKLEDGETDVKVYGWVAREGDYNAGNVVGRYLRKHTNLTTIYEVS 82
Query: 314 XXXXXXXGKMVAI 326
GKM I
Sbjct: 83 KSQSEKSGKMPDI 95
>Os02g0293300 Region of unknown function XH domain containing protein
Length = 75
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 44/60 (73%)
Query: 639 EYGDDVCNAVKTALSEVNEYNASGRYVVPELWNFRKGRKATMKEVLKYIFGQIETTSKRR 698
+ GD+V AV TAL E+NEYNASG YVV ELWN ++ RKA+M+E L+++ Q + +RR
Sbjct: 16 QLGDEVYKAVTTALLEINEYNASGSYVVSELWNNKEDRKASMQEALQHVLEQWKLRRRRR 75
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.132 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,773,966
Number of extensions: 533699
Number of successful extensions: 1282
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 1254
Number of HSP's successfully gapped: 10
Length of query: 700
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 592
Effective length of database: 11,396,689
Effective search space: 6746839888
Effective search space used: 6746839888
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 160 (66.2 bits)