Os01g0147700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Region of unknown function, putative Zinc finger, XS and XH domain containing protein.
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Os01g0147700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Region of unknown function, putative Zinc finger, XS and XH domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.16 | 0.336 | 10.8 | 1.44 | 1.36 | 1.25 | 0.216 | -0.113 | 0.25 | 18.5 | 20.09 | 10 | -- | -- |
| 51.18 | 0.333 | 10.8 | 1.46 | 1.35 | 1.24 | 0.211 | -- | 0.255 | 18.5 | 20.1 | 10 | -- | -- |
| 51.28 | 0.334 | 10.8 | 1.45 | 1.36 | 1.25 | -- | -0.0729 | 0.251 | 18.5 | 20.1 | 10 | -- | -- |
| 51.28 | 0.334 | 10.8 | 1.46 | 1.36 | 1.25 | -- | -- | 0.257 | 18.5 | 20.06 | 7 | -- | -- |
| 108.29 | 0.485 | 10.8 | 1.06 | -- | 2.07 | -- | -1.96 | 0.148 | -- | 23.92 | 266 | -- | -- |
| 74 | 0.403 | 10.7 | 1.72 | 1.63 | -- | 0.389 | -- | 0.468 | 17.6 | -- | -- | -- | -- |
| 74.38 | 0.404 | 10.7 | 1.72 | 1.63 | -- | -- | -- | 0.469 | 17.6 | -- | -- | -- | -- |
| 110.05 | 0.489 | 10.7 | 1.34 | -- | 1.9 | -- | -- | 0.218 | -- | 23.8 | 266 | -- | -- |
| 98.83 | 0.463 | 10.8 | -- | 1.17 | 2.08 | -- | -- | 0.0119 | 18.8 | 15.05 | 98 | -- | -- |
| 212.25 | 0.681 | 10.7 | 1.67 | -- | -- | -- | -- | 0.43 | -- | -- | -- | -- | -- |
| 152.34 | 0.577 | 10.7 | -- | 1.6 | -- | -- | -- | 0.278 | 17.6 | -- | -- | -- | -- |
| 145.64 | 0.562 | 10.8 | -- | -- | 2.82 | -- | -- | -0.0888 | -- | 15.4 | 282 | -- | -- |
| 285.54 | 0.789 | 10.7 | -- | -- | -- | -- | -- | 0.245 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.77 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 19 |
| 2 | 41.82 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 7 | 42.84 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 13 | 43.77 | temperature | 10 | 90 | > th | dose dependent | sin | 3 | NA |
| 17 | 44.08 | temperature | 30 | 90 | < th | dose dependent | sin | 2 | NA |
| 75 | 45.81 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 179 | 47.84 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 244 | 49.07 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 250 | 49.15 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 22 |
| 279 | 49.54 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 15 |
| 284 | 49.63 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 13 |
| 298 | 49.78 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 361 | 50.44 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 404 | 50.72 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 19 |
| 438 | 51.00 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 11 |
| 461 | 51.17 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 471 | 51.21 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 20 |
| 474 | 51.23 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 479 | 51.26 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 480 | 51.26 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 483 | 51.27 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 489 | 51.29 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 496 | 51.30 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 512 | 51.39 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 561 | 51.66 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 565 | 51.68 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 10 |
| 578 | 51.73 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 617 | 51.91 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 697 | 52.31 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 15 |
| 757 | 52.59 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 778 | 52.70 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 892 | 53.26 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 960 | 53.53 | temperature | 25 | 90 | < th | dose independent | sin | 1 | NA |
| 961 | 53.54 | temperature | 25 | 270 | < th | dose independent | sin | 5 | NA |