Os02g0293300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Region of unknown function XH domain containing protein.
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Os02g0293300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Region of unknown function XH domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 261.37 | 0.76 | 3.82 | -1.73 | 0.798 | 0.367 | -3.65 | -1 | -0.727 | 6.21 | 89.03 | 167 | -- | -- |
| 265.64 | 0.759 | 3.84 | -1.63 | 0.8 | 0.341 | -3.18 | -- | -0.719 | 6.37 | 89.83 | 160 | -- | -- |
| 290.05 | 0.793 | 3.82 | -1.71 | 0.774 | 0.327 | -- | -0.258 | -0.701 | 6.88 | 89.85 | 163 | -- | -- |
| 290.41 | 0.794 | 3.82 | -1.7 | 0.771 | 0.321 | -- | -- | -0.696 | 6.85 | 89.83 | 165 | -- | -- |
| 314.11 | 0.83 | 3.83 | -1.74 | -- | 0.113 | -- | -0.308 | -0.661 | -- | 89.85 | 163 | -- | -- |
| 271.77 | 0.773 | 3.82 | -1.7 | 0.607 | -- | -3.17 | -- | -0.648 | 6.66 | -- | -- | -- | -- |
| 295.06 | 0.804 | 3.81 | -1.74 | 0.616 | -- | -- | -- | -0.636 | 7.81 | -- | -- | -- | -- |
| 314.48 | 0.83 | 3.83 | -1.71 | -- | 0.133 | -- | -- | -0.657 | -- | 93 | 98 | -- | -- |
| 364.72 | 0.889 | 3.78 | -- | 0.875 | 0.493 | -- | -- | -0.537 | 6.83 | 90 | 242 | -- | -- |
| 315.62 | 0.83 | 3.83 | -1.73 | -- | -- | -- | -- | -0.627 | -- | -- | -- | -- | -- |
| 374.98 | 0.906 | 3.77 | -- | 0.604 | -- | -- | -- | -0.442 | 8.01 | -- | -- | -- | -- |
| 390.72 | 0.924 | 3.8 | -- | -- | 0.253 | -- | -- | -0.497 | -- | 92.11 | 114 | -- | -- |
| 394.94 | 0.928 | 3.78 | -- | -- | -- | -- | -- | -0.435 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 250.06 | temperature | 25.0 | 720 | > th | dose independent | rect. | 4 | 3 |
| 4 | 251.42 | temperature | 25.0 | 720 | > th | dose independent | rect. | 2 | 6 |
| 6 | 251.53 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 7 | 251.68 | temperature | 25.0 | 720 | > th | dose independent | rect. | 24 | 8 |
| 15 | 253.78 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 13 | 3 |
| 17 | 253.84 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 23 | 254.34 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 24 | 254.44 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 25 | 254.54 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 13 | 3 |
| 29 | 254.95 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 32 | 255.24 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 24 | 7 |
| 43 | 256.08 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 24 | 8 |
| 56 | 257.02 | temperature | 20.0 | 720 | < th | dose independent | rect. | 23 | 3 |
| 57 | 257.15 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 24 | 7 |
| 61 | 257.27 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 7 | 3 |
| 67 | 257.38 | wind | 9.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 68 | 257.38 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 73 | 257.38 | temperature | 10.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 74 | 257.38 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 103 | 257.38 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 104 | 257.38 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 109 | 257.38 | temperature | 10.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 110 | 257.38 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 144 | 257.51 | temperature | 10.0 | 43200 | < th | dose dependent | rect. | 8 | 13 |
| 145 | 257.52 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 146 | 257.52 | temperature | 10.0 | 43200 | < th | dose independent | rect. | 8 | 13 |
| 152 | 257.61 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 24 | 3 |
| 176 | 257.65 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 182 | 257.86 | temperature | 30.0 | 90 | > th | dose independent | rect. | 9 | 4 |
| 194 | 258.04 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 22 | 10 |
| 197 | 258.06 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 16 | 21 |
| 209 | 258.25 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 228 | 258.30 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 1 | 9 |
| 248 | 258.56 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 24 | 8 |
| 258 | 258.66 | temperature | 20.0 | 720 | > th | dose independent | rect. | 22 | 7 |
| 261 | 258.67 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 2 |
| 262 | 258.67 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 13 | 6 |
| 293 | 258.91 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 3 | 1 |
| 338 | 259.24 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 360 | 259.39 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 22 |
| 361 | 259.39 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 3 | 22 |
| 394 | 259.52 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 24 | 7 |
| 413 | 259.64 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 457 | 259.79 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 6 |
| 462 | 259.83 | temperature | 30.0 | 90 | < th | dose independent | sin | 5 | NA |
| 482 | 259.92 | temperature | 20.0 | 720 | > th | dose independent | rect. | 9 | 8 |
| 486 | 259.96 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 494 | 260.00 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 508 | 260.06 | temperature | 30.0 | 90 | > th | dose independent | sin | 7 | NA |
| 582 | 260.43 | humidity | 90.0 | 30 | > th | dose independent | rect. | 3 | 22 |
| 589 | 260.46 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 609 | 260.54 | temperature | 30.0 | 90 | > th | dose independent | rect. | 16 | 21 |
| 614 | 260.56 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 11 | 3 |
| 632 | 260.63 | temperature | 20.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 645 | 260.67 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 692 | 260.80 | wind | 1.0 | 720 | > th | dose independent | rect. | 15 | 12 |
| 702 | 260.84 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 1 | 16 |
| 705 | 260.84 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 1 | 16 |
| 714 | 260.87 | temperature | 30.0 | 10 | > th | dose dependent | sin | 9 | NA |
| 733 | 260.93 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 736 | 260.93 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 19 | 15 |
| 755 | 260.99 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 771 | 261.02 | temperature | 15.0 | 720 | > th | dose independent | rect. | 17 | 16 |
| 815 | 261.12 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 832 | 261.18 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 11 | 13 |
| 836 | 261.22 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 10 | 12 |
| 838 | 261.23 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 865 | 261.34 | radiation | 10.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 878 | 261.36 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 885 | 261.36 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 22 |
| 895 | 261.42 | wind | 1.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 943 | 261.57 | humidity | 90.0 | 90 | < th | dose independent | rect. | 8 | 22 |
| 972 | 261.63 | temperature | 15.0 | 720 | > th | dose independent | rect. | 5 | 16 |
| 986 | 261.66 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 13 | 1 |
| 996 | 261.69 | temperature | 20.0 | 720 | > th | dose independent | rect. | 7 | 10 |