BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0138500 Os01g0138500|AK073435
(335 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0138500 Protein of unknown function DUF789 family protein 595 e-170
Os01g0513400 Protein of unknown function DUF789 family protein 219 2e-57
Os01g0306900 Protein of unknown function DUF789 family protein 215 5e-56
Os10g0494000 Protein of unknown function DUF789 family protein 183 2e-46
Os03g0831300 Protein of unknown function DUF789 family protein 150 2e-36
Os02g0827400 Protein of unknown function DUF789 family protein 147 9e-36
Os04g0528000 Protein of unknown function DUF789 family protein 120 1e-27
Os07g0246600 Protein of unknown function DUF789 family protein 115 5e-26
Os04g0675000 Protein of unknown function DUF789 family protein 85 6e-17
>Os01g0138500 Protein of unknown function DUF789 family protein
Length = 335
Score = 595 bits (1533), Expect = e-170, Method: Compositional matrix adjust.
Identities = 291/323 (90%), Positives = 291/323 (90%)
Query: 1 MANCGXXXXXXXXXXXXXXCNLELFLEATTPVVPTTACSSKKSMNGWKQSDEENALPFFS 60
MANCG CNLELFLEATTPVVPTTACSSKKSMNGWKQSDEENALPFFS
Sbjct: 1 MANCGRRFAAAGAPATARRCNLELFLEATTPVVPTTACSSKKSMNGWKQSDEENALPFFS 60
Query: 61 LGDLWDGFRESSAYGIAVPIVLNGCSDGVVQYYVPYLSAIQLYGRLRRHFYHSRPSGEDS 120
LGDLWDGFRESSAYGIAVPIVLNGCSDGVVQYYVPYLSAIQLYGRLRRHFYHSRPSGEDS
Sbjct: 61 LGDLWDGFRESSAYGIAVPIVLNGCSDGVVQYYVPYLSAIQLYGRLRRHFYHSRPSGEDS 120
Query: 121 DGDYCQDTGSEEMSDLEHDSCPSSTDAFSVQDXXXXXXXXXXXXXXXXXXRISHEQLIFE 180
DGDYCQDTGSEEMSDLEHDSCPSSTDAFSVQD RISHEQLIFE
Sbjct: 121 DGDYCQDTGSEEMSDLEHDSCPSSTDAFSVQDTTCETSTSEASSDESESTRISHEQLIFE 180
Query: 181 FLESEPPYQREPLADKICSLARGFPELNTLRSCDLSPTSWMSVAWYPIYRIPTGPTLCDL 240
FLESEPPYQREPLADKICSLARGFPELNTLRSCDLSPTSWMSVAWYPIYRIPTGPTLCDL
Sbjct: 181 FLESEPPYQREPLADKICSLARGFPELNTLRSCDLSPTSWMSVAWYPIYRIPTGPTLCDL 240
Query: 241 DACFLTYHPLSTQLTGGICPEPKGNNSGVPVTTAMCLPTFAMASYRLKVAAWAPGGRDRQ 300
DACFLTYHPLSTQLTGGICPEPKGNNSGVPVTTAMCLPTFAMASYRLKVAAWAPGGRDRQ
Sbjct: 241 DACFLTYHPLSTQLTGGICPEPKGNNSGVPVTTAMCLPTFAMASYRLKVAAWAPGGRDRQ 300
Query: 301 LVASLSHAADAWLGLLGVHHPDH 323
LVASLSHAADAWLGLLGVHHPDH
Sbjct: 301 LVASLSHAADAWLGLLGVHHPDH 323
>Os01g0513400 Protein of unknown function DUF789 family protein
Length = 369
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/319 (43%), Positives = 175/319 (54%), Gaps = 44/319 (13%)
Query: 21 NLELFLEATTPVVPTTACSS-KKSMNGWKQ---SDEENALPFFSLGDLWDGFRESSAYGI 76
NLE F+ A TP VP S +++ GW+ E P F L D+W+ +RE SAYG
Sbjct: 68 NLERFVAAVTPFVPAQFPSKMQRAARGWRGCGVDAEREEAPHFFLRDVWEAYREWSAYGA 127
Query: 77 AVPIVLNGCSDGVVQYYVPYLSAIQLYG--RLRRHFYHSRPSGEDSDGDYCQDTGSE--- 131
VP+VL+GC DGVVQYYVPYLSAIQLYG + R R +DSDG+Y +
Sbjct: 128 GVPLVLDGC-DGVVQYYVPYLSAIQLYGDPAVLRLSSGPRHIMDDSDGEYHDSSSDASSD 186
Query: 132 -EMSDLEHDSCPSSTDAFSVQDXXXXXXXXXXXXXXXXXXRISHEQLIFEFLESEPPYQR 190
E+ ++H + + FS D H +L+F++LE + P+ R
Sbjct: 187 YELGRVKH----LTQEGFSSDDGESGDL---------------HGRLLFQYLEFDSPFCR 227
Query: 191 EPLADKICSLARGFPELNTLRSCDLSPTSWMSVAWYPIYRIPTGPTLCDLDACFLTYHPL 250
EPL DKI SL+ FP L TLRSCDLSP SW+SVAWYPIYRIPTGPTL DLDACFLT+H L
Sbjct: 228 EPLTDKISSLSARFPGLRTLRSCDLSPRSWISVAWYPIYRIPTGPTLKDLDACFLTFHRL 287
Query: 251 STQLTGGICPEPKGNNSGV------PVTTAMCLPTFAMASYRLKVAAWAPGGRDRQLVAS 304
ST P+ +N G + L F MASY+ + W+ DRQL +
Sbjct: 288 STG--------PEEDNGGAVKYWGPGSKPTIPLSVFGMASYKFSNSIWSSTDGDRQLASF 339
Query: 305 LSHAADAWLGLLGVHHPDH 323
L AA WL HPD+
Sbjct: 340 LQQAASDWLRDSRTSHPDY 358
>Os01g0306900 Protein of unknown function DUF789 family protein
Length = 357
Score = 215 bits (547), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 135/317 (42%), Positives = 179/317 (56%), Gaps = 37/317 (11%)
Query: 21 NLELFLEATTPVVPTTACSSKKSMNGWKQSDEENALPFFSLGDLWDGFRESSAYGIAVPI 80
NLE F+ +T VP A ++ + ++ A P++ L DLW+ F E SAYG VP+
Sbjct: 58 NLECFIASTAVRVP--AHRLPRTSSSSRERGAAGAPPYYELADLWEAFAEWSAYGAGVPL 115
Query: 81 VLNGCSDGVVQYYVPYLSAIQLYGRLRRHFYHSRPSGEDSDGDYCQDTGSEEMSDLEH-- 138
+LNG +DGVVQYYVP+LSAIQL+ R S GEDSDG+ QD SE SD EH
Sbjct: 116 LLNG-TDGVVQYYVPFLSAIQLFA-ARPPSSTSGRLGEDSDGESAQDMSSE--SDHEHLR 171
Query: 139 -----DSCPSSTDAFSVQDXXXXXXXXXXXXXXXXXXRISHEQL--IFEFLESEPPYQRE 191
+S + D FS D +++L +F+++E + PY R+
Sbjct: 172 CRCLVNSISADQDGFSSDDSES-----------------GNQELYPVFQYMEHDAPYGRQ 214
Query: 192 PLADKICSLARGFPELNTLRSCDLSPTSWMSVAWYPIYRIPTGPTLCDLDACFLTYHPLS 251
PLAD I LA FP+L T +SCDL P+SW+SVAWYPIYRIPTGPTL DLDACFLT+H LS
Sbjct: 215 PLADMISLLANRFPDLRTYKSCDLLPSSWISVAWYPIYRIPTGPTLKDLDACFLTFHSLS 274
Query: 252 TQLTGGICPEPKGN----NSGVPVTTAMCLPTFAMASYRLKVAAWAPGGR-DRQLVASLS 306
T G + P+ N + V + LP +AS++ + W ++QL SL
Sbjct: 275 TPAEGTLSGHPETNVFHDSKIYDVPGKVTLPLIGLASHKFNGSMWTSNQEHEQQLTKSLL 334
Query: 307 HAADAWLGLLGVHHPDH 323
AAD WL V+HPD+
Sbjct: 335 KAADDWLCQRRVNHPDY 351
>Os10g0494000 Protein of unknown function DUF789 family protein
Length = 318
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/310 (38%), Positives = 159/310 (51%), Gaps = 26/310 (8%)
Query: 21 NLELFLEATTPVVPTT---ACSSKKSMNGWKQSDEENALPFFSLGDLWDGFRESSAYGIA 77
NL+ FL+ TTP V T + + S + W + E +++ +F+L DLW+ + E SAYG
Sbjct: 20 NLQCFLDCTTPAVDTHLLPKANGRFSSDSWHHA-EMDSVEYFNLADLWEQYYEWSAYGAG 78
Query: 78 VPIVLNGCSDGVVQYYVPYLSAIQLYGRLRRHFYHSRPSGEDSDGDYCQDTGSEEMSDLE 137
+ L G + VVQYYVPYLS IQLY + SR GED+ DY D E+ +
Sbjct: 79 TTVQLYG-GERVVQYYVPYLSGIQLYTNKAQT--ASRSFGEDNGMDYWSD--DEDNEKMS 133
Query: 138 HDSCPSSTDAFSVQDXXXXXXXXXXXXXXXXXXRISHEQLIFEFLESEPPYQREPLADKI 197
+S D+ D R H + FEF E PY R PL DK+
Sbjct: 134 RSWSSTSEDSLFNCDAISGN-------------RKRHGHMYFEFFEVCSPYGRIPLIDKV 180
Query: 198 CSLARGFPELNTLRSCDLSPTSWMSVAWYPIYRIPTGPTLCDLDACFLTYHPLSTQLTGG 257
L++ +P L +LRS DLSP SWMSVAWYPIY IP + DL ACFLTYH +S+
Sbjct: 181 YELSQSYPGLTSLRSVDLSPASWMSVAWYPIYHIPYQRNVKDLSACFLTYHTISSSFQDY 240
Query: 258 IC---PEPKGNNSGVPVTTAMCLPTFAMASYRLKVAAWA-PGGRDRQLVASLSHAADAWL 313
K N+ + L F +A+++L+ + W P DR + SL AAD+WL
Sbjct: 241 ALESMANGKRNDETEKKVSKTHLAPFGLAAHKLQGSLWTNPRTGDRDRMVSLFGAADSWL 300
Query: 314 GLLGVHHPDH 323
LGV H D+
Sbjct: 301 KQLGVQHHDY 310
>Os03g0831300 Protein of unknown function DUF789 family protein
Length = 312
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 114/204 (55%), Gaps = 9/204 (4%)
Query: 21 NLELFLEATTPVVPTTACSSKKSMNGWKQSDEENALPFFSLGDLWDGFRESSAYGIAVPI 80
NLE FL +TTP VP K S+ W+ D N P+F L DLW+ FRE SAYG VP+
Sbjct: 118 NLERFLTSTTPSVPFQYLP-KTSLKMWRTGDCTNTSPYFCLEDLWESFREWSAYGAGVPL 176
Query: 81 VLNGCSDGVVQYYVPYLSAIQLYGRLRRHFYHSRPSGEDSDGDYCQDTGSEEMSDLEHDS 140
+LNG SD V QYYVPYLSAIQLY R +R G++SDG+Y D SE S+ + D
Sbjct: 177 LLNG-SDSVTQYYVPYLSAIQLYADPSRSVSRTRRLGDESDGEYL-DASSESSSETDVDR 234
Query: 141 CPSSTDAFSVQDXXXXXXXXXXXXXXXXXXRISHEQLIFEFLESEPPYQREPLADKICSL 200
S SV+ S IF+++E +PP+ REPL DK+ L
Sbjct: 235 LRVS----SVEATHGMANGSLRTDDADGYASASSP--IFQYMERDPPFCREPLTDKVSIL 288
Query: 201 ARGFPELNTLRSCDLSPTSWMSVA 224
A FP L +SCDL P+SWMSVA
Sbjct: 289 ASRFPALKAFKSCDLLPSSWMSVA 312
>Os02g0827400 Protein of unknown function DUF789 family protein
Length = 299
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 149/306 (48%), Gaps = 34/306 (11%)
Query: 21 NLELFLEATTPVVPTTACSS---KKSMNGWKQSDEENALPFFSLGDLWDGFRESSAYGIA 77
NLE+FL+A TP + + S + W+ +++ + +F+L DLW+ + ESSAYG+A
Sbjct: 11 NLEVFLQAATPCLRWRSASMECFQDPSKVWQLDKKKDEVDYFALEDLWEHYAESSAYGLA 70
Query: 78 VPIVLNGCSDGVVQYYVPYLSAIQLYGRLRRHFYHSRPS-GEDSDGDYCQDTGSEEMSDL 136
VP+ L + + Q++VPYLSAIQ+Y + SR S G +SD TG
Sbjct: 71 VPVRLES-GNTITQHFVPYLSAIQIYTSTKSLLAFSRGSAGSESDSWSDDSTG------- 122
Query: 137 EHDSCPSSTDAFSVQDXXXXXXXXXXXXXXXXXXRISHEQLIFEFLESEPPYQREPLADK 196
D S DA + L F++ E PY+R PLADK
Sbjct: 123 --DKLSRSWDA-----AMSDDDDSSHDSSESVSAKQGAGCLNFQYNEWSSPYERVPLADK 175
Query: 197 ICSLARGFPELNTLRSCDLSPTSWMSVAWYPIYRIPTGPTLCDLDACFLTYHPLSTQLTG 256
+ LA+ +P L +L S LSP+SWMSVAWYPIY IP L L CFLTYH LS+
Sbjct: 176 VAELAQHYPCLTSLSSAQLSPSSWMSVAWYPIYHIPARGNLKGLSTCFLTYHSLSSVFQD 235
Query: 257 GICPEPKGNNSGVPVTTAMCLPTFAMASYRLKVAAWAPGGRDRQLVASLSHAADAWLGLL 316
+ + S V V+ F +A+YR + W + L AA +WL L
Sbjct: 236 NV----EEGRSVVGVS------PFGLATYRAEGKLWTSSRS-----SDLFWAASSWLKQL 280
Query: 317 GVHHPD 322
+HPD
Sbjct: 281 RAYHPD 286
>Os04g0528000 Protein of unknown function DUF789 family protein
Length = 313
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 138/305 (45%), Gaps = 41/305 (13%)
Query: 21 NLELFLEATTPVV-PTTACSSKKSMNGWKQSDEENALPFFSLGDLWDGFRESSAYGIAVP 79
NL FL + TP + P T G+ E FF L DLW+ F SAYG+ P
Sbjct: 22 NLRSFLHSVTPTLEPYTVAKP----GGYSGRVPELGRCFF-LVDLWNHFYPLSAYGVGTP 76
Query: 80 IVLNGCSDGVVQYYVPYLSAIQLYGRLRRHFYHSRPSGEDSDGDYCQDTG-SEEMSDLEH 138
+ L + + QY+VPYLSAIQL+ SD C + + D +
Sbjct: 77 VRLPSGQE-IEQYFVPYLSAIQLH--------------TISDFTSCNEIMVGNNLFDANN 121
Query: 139 DSCPSSTDAFSVQDXXXXXXXXXXXXXXXXXXRISHEQLIFEFLESEPPYQREPLADKIC 198
S+ D ++ Q R + F++ E + PY+R PLADK+
Sbjct: 122 YGWCSAADNWNGQ-------YATTSLARYDSPRSMNGGPCFQYFECDSPYERMPLADKVY 174
Query: 199 SLARGFPELNTLRSCDLSPTSWMSVAWYPIYRIPTGPTLCDLDACFLTYHPLSTQLTGGI 258
L FP L+ L S +LSP+SWMSV WYPI +P DL CFLTYH LST
Sbjct: 175 ELCYNFPPLSYLSSIELSPSSWMSVFWYPIGHVP-AMNKKDLTTCFLTYHSLST------ 227
Query: 259 CPEPKGNNSGVPVTTAMCLPTFAMASYRLKVAAWAPGGR-DRQLVASLSHAADAWLGLLG 317
+ +S P+T LP +A+++ W D++L SL AAD+WL L
Sbjct: 228 LEDRTPFDSKDPLT----LPPIGLATHKTDGDVWTSANSGDQELTTSLVGAADSWLKKLD 283
Query: 318 VHHPD 322
V H D
Sbjct: 284 VQHHD 288
>Os07g0246600 Protein of unknown function DUF789 family protein
Length = 347
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 98/198 (49%), Gaps = 35/198 (17%)
Query: 21 NLELFLEATTPVVPTTACSSKKSMNGWKQSDEENALPFFSLGDLWDGFRESSAYGIAVPI 80
NLE FL +TTP VP K SM GW+ D N+ P+F LGDLW+ F E S YG VP+
Sbjct: 151 NLERFLSSTTPSVPVQYLP-KTSMRGWRSGDAMNSSPYFCLGDLWEAFNEWSFYGAGVPV 209
Query: 81 VLNGCSDGVVQYYVPYLSAIQLYGRLRRHFYHSRPSGEDSDGDYCQD-------TGSEEM 133
VLNG D V+QYYVPYLSAIQLY +H R E+SD + T ++++
Sbjct: 210 VLNG-KDSVIQYYVPYLSAIQLYADPSKHSTRIRHPWEESDEESMDTSSESSSGTDADQL 268
Query: 134 SDLEHDSCPSSTDAFSVQDXXXXXXXXXXXXXXXXXXRISHEQLIFEFLESEPPYQREPL 193
LE+ F +D + +FE+LE +PPY REPL
Sbjct: 269 RGLEN-------GGFQRED---------------SESHFPSTRPLFEYLEKDPPYGREPL 306
Query: 194 ADKICSLARGFPELNTLR 211
DK AR P + +
Sbjct: 307 TDK----ARAPPSFDKRK 320
>Os04g0675000 Protein of unknown function DUF789 family protein
Length = 958
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 123/296 (41%), Gaps = 71/296 (23%)
Query: 21 NLELFLEATTPVVPTTACSSKKSMNGWKQSDEENALPF------FSLGDLWDGFRESSAY 74
+ E F+ + +PV+ T+C Q + + P+ SL ++W+ + E +Y
Sbjct: 643 DFETFIYSASPVIAKTSCMRN---GNCLQDPQAGSSPYQYQISDVSLRNVWEWYEEPGSY 699
Query: 75 GIAVPI--VLNGCSD--GVVQ---YYVPYLSAIQLYGRLRRHFYHSRPSGEDSDGDYCQD 127
G+ V I LN GV + Y++P LSAIQL+ + + + H DSD D+
Sbjct: 700 GLEVEIHRSLNSTRSACGVSEFCAYFLPSLSAIQLFEQCKNNLDHKF----DSDDDFL-- 753
Query: 128 TGSEEMSDLEHDSCPSSTDAFSVQDXXXXXXXXXXXXXXXXXXRISHEQLIFEFLESEPP 187
+S P + SVQD H + +FE+ ESE P
Sbjct: 754 -----LSQPNGVYLPKPS--LSVQD---------------------HGEPLFEYFESEHP 785
Query: 188 YQREPLADKICSLARG--------FPE---LNTLRSCDLSPTSWMSVAWYPIYRIPTGPT 236
R PL +KI L G F + L L+ DL P SW VAWYPI RIP G
Sbjct: 786 SSRPPLFEKIKQLTSGENLSTCQIFGDPKMLENLKLRDLHPASWFCVAWYPICRIPQG-- 843
Query: 237 LCDLDACFLTYHPLSTQLTGGICPEPKGNNSGVPVTTAMCLPTFAMASYRLKVAAW 292
+ A FLTYH L G + P+ + T +C P SY K W
Sbjct: 844 --NCRAAFLTYHSL-----GKVVPQIHSPDKADEPTHLVC-PVVGFWSYNDKGEQW 891
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.135 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,629,889
Number of extensions: 492923
Number of successful extensions: 980
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 955
Number of HSP's successfully gapped: 9
Length of query: 335
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 234
Effective length of database: 11,762,187
Effective search space: 2752351758
Effective search space used: 2752351758
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)