Os07g0246600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF789 family protein.
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Os07g0246600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF789 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56.06 | 0.352 | 10.4 | -0.133 | 0.574 | -1.02 | 0.293 | 4.91 | 0.0913 | 14.6 | 25.7 | 2658 | -- | -- |
| 63.11 | 0.37 | 10.5 | -1.12 | 0.624 | -0.635 | 0.113 | -- | 0.0974 | 14.2 | 20.03 | 15458 | -- | -- |
| 56.16 | 0.349 | 10.4 | -0.101 | 0.576 | -1.04 | -- | 5.1 | 0.0703 | 14.4 | 26.1 | 2724 | -- | -- |
| 61.21 | 0.364 | 10.5 | -1.29 | 0.619 | -0.625 | -- | -- | 0.0321 | 14.1 | 22.19 | 9749 | -- | -- |
| 74.96 | 0.403 | 10.4 | -0.137 | -- | -1.14 | -- | 4.75 | 0.098 | -- | 25.46 | 2617 | -- | -- |
| 72.36 | 0.399 | 10.6 | -1.6 | 0.652 | -- | 0.154 | -- | -0.228 | 14.1 | -- | -- | -- | -- |
| 72.44 | 0.399 | 10.6 | -1.59 | 0.652 | -- | -- | -- | -0.227 | 14.1 | -- | -- | -- | -- |
| 82.42 | 0.423 | 10.5 | -1.32 | -- | -0.662 | -- | -- | 0.0118 | -- | 24 | 9747 | -- | -- |
| 72.47 | 0.396 | 10.4 | -- | 0.626 | -1.3 | -- | -- | 0.347 | 14.1 | 12.5 | 47520 | -- | -- |
| 97.92 | 0.462 | 10.6 | -1.62 | -- | -- | -- | -- | -0.243 | -- | -- | -- | -- | -- |
| 139.45 | 0.552 | 10.5 | -- | 0.682 | -- | -- | -- | -0.0497 | 14.1 | -- | -- | -- | -- |
| 95.87 | 0.456 | 10.4 | -- | -- | -1.34 | -- | -- | 0.347 | -- | 12.61 | 47520 | -- | -- |
| 167.29 | 0.604 | 10.5 | -- | -- | -- | -- | -- | -0.0628 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.05 | wind | 3.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 2 | 54.13 | wind | 3.0 | 10 | < th | dose dependent | rect. | 2 | 4 |
| 3 | 54.30 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 7 | 54.46 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 17 | 54.97 | wind | 3.0 | 270 | < th | dose independent | rect. | 2 | 2 |
| 20 | 55.06 | wind | 3.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 35 | 55.43 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 37 | 55.47 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 43 | 55.57 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 45 | 55.61 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 47 | 55.61 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 52 | 55.69 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 65 | 55.83 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 79 | 55.84 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 83 | 55.91 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 94 | 55.93 | humidity | 70.0 | 720 | < th | dose independent | rect. | 19 | 1 |
| 105 | 55.95 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 16 |
| 116 | 56.08 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 128 | 56.10 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 129 | 56.10 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 139 | 56.20 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 143 | 56.24 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 146 | 56.26 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 149 | 56.29 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 150 | 56.32 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 2 | 4 |
| 152 | 56.32 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 2 | 4 |
| 155 | 56.34 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 2 | 4 |
| 158 | 56.37 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 171 | 56.39 | temperature | 25.0 | 720 | > th | dose dependent | sin | 10 | NA |
| 196 | 56.52 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 197 | 56.54 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 15 | 20 |
| 206 | 56.55 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 242 | 56.68 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 246 | 56.70 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 7 | 3 |
| 250 | 56.72 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 2 | 4 |
| 253 | 56.73 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 15 |
| 254 | 56.73 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 260 | 56.76 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 14 | 18 |
| 279 | 56.78 | radiation | 40.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 293 | 56.81 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 306 | 56.84 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 307 | 56.84 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 308 | 56.84 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 3 | 3 |
| 315 | 56.86 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 316 | 56.86 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 320 | 56.88 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 323 | 56.89 | radiation | 10.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 329 | 56.90 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 352 | 56.95 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 4 |
| 354 | 56.95 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 365 | 56.98 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 19 | 11 |
| 366 | 56.99 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 14 | 8 |
| 374 | 57.00 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 14 | 6 |
| 383 | 57.01 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 389 | 57.01 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 14 | 12 |
| 414 | 57.03 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 4 | 7 |
| 420 | 57.04 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 6 | 5 |
| 424 | 57.04 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 21 | 14 |
| 473 | 57.09 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 483 | 57.11 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 20 |
| 484 | 57.11 | temperature | 15.0 | 10 | > th | dose independent | rect. | 6 | 20 |
| 491 | 57.13 | radiation | 10.0 | 10 | < th | dose independent | rect. | 2 | 4 |
| 496 | 57.14 | temperature | 10.0 | 10 | > th | dose independent | rect. | 2 | 4 |
| 498 | 57.14 | temperature | 30.0 | 10 | < th | dose independent | rect. | 2 | 4 |
| 499 | 57.14 | humidity | 50.0 | 10 | > th | dose independent | rect. | 2 | 4 |
| 502 | 57.14 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 2 | 4 |
| 503 | 57.14 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 4 |
| 512 | 57.14 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 10 |
| 526 | 57.18 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 528 | 57.19 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 544 | 57.19 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 629 | 57.28 | wind | 9.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 675 | 57.30 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 22 | 7 |
| 679 | 57.31 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 762 | 57.43 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 791 | 57.46 | radiation | 30.0 | 90 | < th | dose independent | rect. | 15 | 15 |
| 804 | 57.48 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 812 | 57.48 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 15 | 20 |
| 814 | 57.49 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 815 | 57.49 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 818 | 57.49 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 822 | 57.49 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 827 | 57.49 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 834 | 57.49 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 835 | 57.49 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 20 |
| 844 | 57.50 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 20 |
| 848 | 57.50 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 7 | 4 |
| 867 | 57.50 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 20 |
| 873 | 57.51 | radiation | 20.0 | 43200 | > th | dose dependent | rect. | 16 | 16 |
| 879 | 57.52 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 14 | 16 |
| 889 | 57.54 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 15 |
| 933 | 57.61 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 5 |
| 937 | 57.63 | wind | 9.0 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 938 | 57.63 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 943 | 57.64 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 946 | 57.65 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 957 | 57.67 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 3 | 13 |
| 967 | 57.69 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 970 | 57.69 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 973 | 57.69 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 974 | 57.69 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 976 | 57.69 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 990 | 57.69 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 1 | 4 |