Os02g0827400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF789 family protein.
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Os02g0827400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF789 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 285.52 | 0.794 | 8.82 | -2.19 | 9.89 | 4.33 | 2.86 | 0.343 | -0.916 | 5.8 | 27.1 | 383 | 15 | -- |
| 285.52 | 0.787 | 8.81 | -2.14 | 9.89 | 4.3 | 2.79 | -- | -0.906 | 5.78 | 26.93 | 377 | 15 | -- |
| 295.88 | 0.801 | 8.73 | -1.64 | 10.3 | 4.35 | -- | -3.9 | -0.826 | 5.91 | 30 | 338 | 14.3 | -- |
| 303.34 | 0.811 | 8.82 | -2.08 | 9.94 | 4.36 | -- | -- | -0.894 | 5.73 | 27.27 | 386 | 15.3 | -- |
| 483.21 | 1.03 | 9.11 | -2.77 | -- | 10.7 | -- | 3.8 | -1.29 | -- | 63.27 | 24 | 0.302 | -- |
| 512.15 | 1.06 | 8.99 | -3.11 | 9.5 | -- | 3.66 | -- | -1.64 | 5.7 | -- | -- | -- | -- |
| 544.78 | 1.09 | 9 | -3.09 | 9.52 | -- | -- | -- | -1.66 | 5.67 | -- | -- | -- | -- |
| 502.36 | 1.04 | 9.12 | -2.77 | -- | 10.5 | -- | -- | -1.34 | -- | 73.08 | 23 | 0.356 | -- |
| 405.23 | 0.938 | 8.74 | -- | 9.92 | 5.38 | -- | -- | -0.505 | 5.65 | 27.16 | 447 | 15.9 | -- |
| 5247.64 | 3.38 | 9.14 | -2.78 | -- | -- | -- | -- | -1.43 | -- | -- | -- | -- | -- |
| 795.91 | 1.32 | 8.92 | -- | 9.47 | -- | -- | -- | -1.31 | 5.68 | -- | -- | -- | -- |
| 493.31 | 1.03 | 8.94 | -- | -- | 12.7 | -- | -- | -0.384 | -- | 117.6 | 1718 | 2.71 | -- |
| 5452.05 | 3.45 | 9.07 | -- | -- | -- | -- | -- | -1.12 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 281.59 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 11 | 291.87 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 15 |
| 17 | 293.76 | temperature | 30 | 270 | < th | dose dependent | sin | 20 | NA |
| 35 | 300.36 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 14 |
| 49 | 305.66 | temperature | 25 | 720 | < th | dose dependent | sin | 23 | NA |
| 62 | 308.39 | temperature | 10 | 270 | > th | dose dependent | sin | 21 | NA |
| 95 | 316.11 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 21 |
| 101 | 316.92 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 23 |
| 105 | 317.13 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 120 | 318.77 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 10 |
| 123 | 318.92 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 143 | 320.07 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 14 |
| 155 | 320.50 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 160 | 320.76 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 17 |
| 184 | 321.56 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 11 |
| 189 | 321.84 | temperature | 25 | 1440 | < th | dose dependent | sin | 7 | NA |
| 207 | 322.45 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 13 |
| 220 | 322.65 | temperature | 25 | 270 | < th | dose independent | rect. | 8 | 15 |
| 251 | 323.65 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 268 | 324.38 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 287 | 325.05 | temperature | 10 | 90 | > th | dose dependent | sin | 19 | NA |
| 298 | 325.54 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 331 | 326.56 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 3 |
| 339 | 326.73 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 8 |
| 404 | 327.89 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 434 | 328.35 | temperature | 10 | 720 | > th | dose dependent | sin | 3 | NA |
| 464 | 328.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 518 | 329.54 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 519 | 329.57 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 531 | 329.70 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 23 |
| 580 | 330.15 | temperature | 20 | 270 | > th | dose dependent | rect. | 9 | 14 |
| 611 | 330.54 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 614 | 330.57 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 719 | 331.71 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 23 |
| 849 | 333.26 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 901 | 334.00 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 7 |
| 931 | 334.39 | temperature | 10 | 1440 | > th | dose dependent | sin | 8 | NA |
| 999 | 335.06 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 7 |