BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0827400 Os02g0827400|Os02g0827400
(299 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0827400 Protein of unknown function DUF789 family protein 504 e-143
Os10g0494000 Protein of unknown function DUF789 family protein 185 4e-47
Os04g0528000 Protein of unknown function DUF789 family protein 155 4e-38
Os01g0513400 Protein of unknown function DUF789 family protein 137 7e-33
Os01g0306900 Protein of unknown function DUF789 family protein 132 4e-31
Os01g0138500 Protein of unknown function DUF789 family protein 129 3e-30
Os03g0831300 Protein of unknown function DUF789 family protein 84 9e-17
>Os02g0827400 Protein of unknown function DUF789 family protein
Length = 299
Score = 504 bits (1297), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/299 (86%), Positives = 259/299 (86%)
Query: 1 MEKKKSNTDNNLEVFLQAATPCLRWRSASMECFQDPSKVWQLDKKKDEVDYFALEDLWEH 60
MEKKKSNTDNNLEVFLQAATPCLRWRSASMECFQDPSKVWQLDKKKDEVDYFALEDLWEH
Sbjct: 1 MEKKKSNTDNNLEVFLQAATPCLRWRSASMECFQDPSKVWQLDKKKDEVDYFALEDLWEH 60
Query: 61 YAESSAYGLAVPVRLESGNTITQHFVPYLSAIQIYTSTKSLLAFSRGSAGSESDSWSDDS 120
YAESSAYGLAVPVRLESGNTITQHFVPYLSAIQIYTSTKSLLAFSRGSAGSESDSWSDDS
Sbjct: 61 YAESSAYGLAVPVRLESGNTITQHFVPYLSAIQIYTSTKSLLAFSRGSAGSESDSWSDDS 120
Query: 121 TGDKLXXXXXXXXXXXXXXXXXXXXXXXXKQGAGCLNFQYNEWSSPYERVPLADKVAELA 180
TGDKL KQGAGCLNFQYNEWSSPYERVPLADKVAELA
Sbjct: 121 TGDKLSRSWDAAMSDDDDSSHDSSESVSAKQGAGCLNFQYNEWSSPYERVPLADKVAELA 180
Query: 181 QHYPCXXXXXXXXXXXXXXXXVAWYPIYHIPARGNLKGLSTCFLTYHSLSSVFQDNVEEG 240
QHYPC VAWYPIYHIPARGNLKGLSTCFLTYHSLSSVFQDNVEEG
Sbjct: 181 QHYPCLTSLSSAQLSPSSWMSVAWYPIYHIPARGNLKGLSTCFLTYHSLSSVFQDNVEEG 240
Query: 241 RSVVGVSPFGLATYRAEGKLWTSSRSSDLFWAASSWLKQLRAYHPDFIFFTSHCRQSAF 299
RSVVGVSPFGLATYRAEGKLWTSSRSSDLFWAASSWLKQLRAYHPDFIFFTSHCRQSAF
Sbjct: 241 RSVVGVSPFGLATYRAEGKLWTSSRSSDLFWAASSWLKQLRAYHPDFIFFTSHCRQSAF 299
>Os10g0494000 Protein of unknown function DUF789 family protein
Length = 318
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 114/309 (36%), Positives = 153/309 (49%), Gaps = 24/309 (7%)
Query: 4 KKSNTDNNLEVFLQAATPCLRWRSASMECFQDPSKVWQLDKKKDEVDYFALEDLWEHYAE 63
+ S+ +NL+ FL TP + + S W + D V+YF L DLWE Y E
Sbjct: 13 RSSSPSSNLQCFLDCTTPAVDTHLLPKANGRFSSDSWH-HAEMDSVEYFNLADLWEQYYE 71
Query: 64 SSAYGLAVPVRLESGNTITQHFVPYLSAIQIYTSTKSLLAFSRGSAGSESDSWSDDSTGD 123
SAYG V+L G + Q++VPYLS IQ+YT+ + S G D WSDD +
Sbjct: 72 WSAYGAGTTVQLYGGERVVQYYVPYLSGIQLYTNKAQTASRSFGEDNG-MDYWSDDEDNE 130
Query: 124 KLXXXXXXXXXXXXXXXXXXXXXXXXKQGAGCLNFQYNEWSSPYERVPLADKVAELAQHY 183
K+ ++ G + F++ E SPY R+PL DKV EL+Q Y
Sbjct: 131 KM---SRSWSSTSEDSLFNCDAISGNRKRHGHMYFEFFEVCSPYGRIPLIDKVYELSQSY 187
Query: 184 PCXXXXXXXXXXXXXXXXVAWYPIYHIPARGNLKGLSTCFLTYHSLSSVFQ--------- 234
P VAWYPIYHIP + N+K LS CFLTYH++SS FQ
Sbjct: 188 PGLTSLRSVDLSPASWMSVAWYPIYHIPYQRNVKDLSACFLTYHTISSSFQDYALESMAN 247
Query: 235 ----DNVEEGRSVVGVSPFGLATYRAEGKLWTSSRSSD------LFWAASSWLKQLRAYH 284
D E+ S ++PFGLA ++ +G LWT+ R+ D LF AA SWLKQL H
Sbjct: 248 GKRNDETEKKVSKTHLAPFGLAAHKLQGSLWTNPRTGDRDRMVSLFGAADSWLKQLGVQH 307
Query: 285 PDFIFFTSH 293
D+ +F +H
Sbjct: 308 HDYNYFITH 316
>Os04g0528000 Protein of unknown function DUF789 family protein
Length = 313
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 147/305 (48%), Gaps = 43/305 (14%)
Query: 9 DNNLEVFLQAATPCLRWRSASMECFQDPSKVWQLDKKKDEVDYFALEDLWEHYAESSAYG 68
++NL FL + TP L + + +V +L + F L DLW H+ SAYG
Sbjct: 20 NSNLRSFLHSVTPTLEPYTVAKPGGYS-GRVPELGRC------FFLVDLWNHFYPLSAYG 72
Query: 69 LAVPVRLESGNTITQHFVPYLSAIQI-----YTSTKSLLA----FSRGSAG--SESDSWS 117
+ PVRL SG I Q+FVPYLSAIQ+ +TS ++ F + G S +D+W+
Sbjct: 73 VGTPVRLPSGQEIEQYFVPYLSAIQLHTISDFTSCNEIMVGNNLFDANNYGWCSAADNWN 132
Query: 118 DDSTGDKLXXXXXXXXXXXXXXXXXXXXXXXXKQGAGCLNFQYNEWSSPYERVPLADKVA 177
L G C FQY E SPYER+PLADKV
Sbjct: 133 GQYATTSLARYDSPRSM----------------NGGPC--FQYFECDSPYERMPLADKVY 174
Query: 178 ELAQHYPCXXXXXXXXXXXXXXXXVAWYPIYHIPARGNLKGLSTCFLTYHSLSSVFQDNV 237
EL ++P V WYPI H+PA N K L+TCFLTYHSLS++
Sbjct: 175 ELCYNFPPLSYLSSIELSPSSWMSVFWYPIGHVPAM-NKKDLTTCFLTYHSLSTLEDRTP 233
Query: 238 EEGRSVVGVSPFGLATYRAEGKLWTSSRSSD------LFWAASSWLKQLRAYHPDFIFFT 291
+ + + + P GLAT++ +G +WTS+ S D L AA SWLK+L H DF +F
Sbjct: 234 FDSKDPLTLPPIGLATHKTDGDVWTSANSGDQELTTSLVGAADSWLKKLDVQHHDFNYFL 293
Query: 292 SHCRQ 296
+ R
Sbjct: 294 NSNRN 298
>Os01g0513400 Protein of unknown function DUF789 family protein
Length = 369
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 143/305 (46%), Gaps = 30/305 (9%)
Query: 10 NNLEVFLQAATPCLRWRSASMECFQDPSKVWQ---LDKKKDEVDYFALEDLWEHYAESSA 66
NLE F+ A TP + + S Q ++ W+ +D +++E +F L D+WE Y E SA
Sbjct: 67 GNLERFVAAVTPFVPAQFPSK--MQRAARGWRGCGVDAEREEAPHFFLRDVWEAYREWSA 124
Query: 67 YGLAVPVRLESGNTITQHFVPYLSAIQIYTSTKSLLAFSRGSAGSESDSWSDDSTGDKLX 126
YG VP+ L+ + + Q++VPYLSAIQ+Y L R S+G DDS G+
Sbjct: 125 YGAGVPLVLDGCDGVVQYYVPYLSAIQLYGDPAVL----RLSSGPRH--IMDDSDGEYHD 178
Query: 127 XXXXXXXXXXXXXXXXXXXXXXXKQGA------GCLNFQYNEWSSPYERVPLADKVAELA 180
G L FQY E+ SP+ R PL DK++ L+
Sbjct: 179 SSSDASSDYELGRVKHLTQEGFSSDDGESGDLHGRLLFQYLEFDSPFCREPLTDKISSLS 238
Query: 181 QHYPCXXXXXXXXXXXXXXXXVAWYPIYHIPARGNLKGLSTCFLTYHSLSSVFQDN---- 236
+P VAWYPIY IP LK L CFLT+H LS+ +++
Sbjct: 239 ARFPGLRTLRSCDLSPRSWISVAWYPIYRIPTGPTLKDLDACFLTFHRLSTGPEEDNGGA 298
Query: 237 ----VEEGRSVVGVSPFGLATYRAEGKLWTSSR-----SSDLFWAASSWLKQLRAYHPDF 287
+ + +S FG+A+Y+ +W+S+ +S L AAS WL+ R HPD+
Sbjct: 299 VKYWGPGSKPTIPLSVFGMASYKFSNSIWSSTDGDRQLASFLQQAASDWLRDSRTSHPDY 358
Query: 288 IFFTS 292
FF S
Sbjct: 359 QFFAS 363
>Os01g0306900 Protein of unknown function DUF789 family protein
Length = 357
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 122/265 (46%), Gaps = 22/265 (8%)
Query: 51 YFALEDLWEHYAESSAYGLAVPVRLESGNTITQHFVPYLSAIQIYTSTKSLLAFSRGSAG 110
Y+ L DLWE +AE SAYG VP+ L + + Q++VP+LSAIQ++ + R
Sbjct: 93 YYELADLWEAFAEWSAYGAGVPLLLNGTDGVVQYYVPFLSAIQLFAARPPSSTSGRLGED 152
Query: 111 SESDSWSDDSTGDKLXXXXXXXXXXXXXXXXXXXXXXXXKQGAGCL--NFQYNEWSSPYE 168
S+ +S D S+ + G L FQY E +PY
Sbjct: 153 SDGESAQDMSSESDHEHLRCRCLVNSISADQDGFSSDDSESGNQELYPVFQYMEHDAPYG 212
Query: 169 RVPLADKVAELAQHYPCXXXXXXXXXXXXXXXXVAWYPIYHIPARGNLKGLSTCFLTYHS 228
R PLAD ++ LA +P VAWYPIY IP LK L CFLT+HS
Sbjct: 213 RQPLADMISLLANRFPDLRTYKSCDLLPSSWISVAWYPIYRIPTGPTLKDLDACFLTFHS 272
Query: 229 LSS-------------VFQDN-VEEGRSVVGVSPFGLATYRAEGKLWTSSR------SSD 268
LS+ VF D+ + + V + GLA+++ G +WTS++ +
Sbjct: 273 LSTPAEGTLSGHPETNVFHDSKIYDVPGKVTLPLIGLASHKFNGSMWTSNQEHEQQLTKS 332
Query: 269 LFWAASSWLKQLRAYHPDFIFFTSH 293
L AA WL Q R HPD+ FF SH
Sbjct: 333 LLKAADDWLCQRRVNHPDYRFFLSH 357
>Os01g0138500 Protein of unknown function DUF789 family protein
Length = 335
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 136/319 (42%), Gaps = 48/319 (15%)
Query: 11 NLEVFLQAATPCLRWRSASMECFQDPSKVWQLDKKKDEVDYFALEDLWEHYAESSAYGLA 70
NLE+FL+A TP + + S + W+ +++ + +F+L DLW+ + ESSAYG+A
Sbjct: 21 NLELFLEATTPVVPTTACSS---KKSMNGWKQSDEENALPFFSLGDLWDGFRESSAYGIA 77
Query: 71 VPVRLES-GNTITQHFVPYLSAIQIYTSTKSLLAFSRGSAGSESDSWSDDSTGDKLXXXX 129
VP+ L + + Q++VPYLSAIQ+Y + SR S +DS GD
Sbjct: 78 VPIVLNGCSDGVVQYYVPYLSAIQLYGRLRRHFYHSRPSG--------EDSDGDYCQDTG 129
Query: 130 XXXXXXXXXXXXXXXXXXXXKQGAGC---------------------LNFQYNEWSSPYE 168
Q C L F++ E PY+
Sbjct: 130 SEEMSDLEHDSCPSSTDAFSVQDTTCETSTSEASSDESESTRISHEQLIFEFLESEPPYQ 189
Query: 169 RVPLADKVAELAQHYPCXXXXXXXXXXXXXXXXVAWYPIYHIPARGNLKGLSTCFLTYHS 228
R PLADK+ LA+ +P VAWYPIY IP L L CFLTYH
Sbjct: 190 REPLADKICSLARGFPELNTLRSCDLSPTSWMSVAWYPIYRIPTGPTLCDLDACFLTYHP 249
Query: 229 LSSVFQDNV----EEGRSVVGVS------PFGLATYRAEGKLWTSSRS-----SDLFWAA 273
LS+ + + S V V+ F +A+YR + W + L AA
Sbjct: 250 LSTQLTGGICPEPKGNNSGVPVTTAMCLPTFAMASYRLKVAAWAPGGRDRQLVASLSHAA 309
Query: 274 SSWLKQLRAYHPDFIFFTS 292
+WL L +HPD FF +
Sbjct: 310 DAWLGLLGVHHPDHRFFAA 328
>Os03g0831300 Protein of unknown function DUF789 family protein
Length = 312
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 11 NLEVFLQAATPCLRWRSASMECFQDPSKVWQLDKKKDEVDYFALEDLWEHYAESSAYGLA 70
NLE FL + TP + ++ K+W+ + YF LEDLWE + E SAYG
Sbjct: 118 NLERFLTSTTPSVPFQYLPKTSL----KMWRTGDCTNTSPYFCLEDLWESFREWSAYGAG 173
Query: 71 VPVRLESGNTITQHFVPYLSAIQIYTSTKSLLAFSRGSAGSESDSW--------SDDSTG 122
VP+ L +++TQ++VPYLSAIQ+Y ++ +R G ESD S ++
Sbjct: 174 VPLLLNGSDSVTQYYVPYLSAIQLYADPSRSVSRTR-RLGDESDGEYLDASSESSSETDV 232
Query: 123 DKLXXXXXXXXXXXXXXXXXXXXXXXXKQGAGCLNFQYNEWSSPYERVPLADKVAELAQH 182
D+L + + FQY E P+ R PL DKV+ LA
Sbjct: 233 DRLRVSSVEATHGMANGSLRTDDADGYASASSPI-FQYMERDPPFCREPLTDKVSILASR 291
Query: 183 YP 184
+P
Sbjct: 292 FP 293
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.130 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,423,763
Number of extensions: 322719
Number of successful extensions: 726
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 706
Number of HSP's successfully gapped: 9
Length of query: 299
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 199
Effective length of database: 11,814,401
Effective search space: 2351065799
Effective search space used: 2351065799
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)