BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0593000 Os12g0593000|AK067863
(686 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0593000 Similar to Extra-large G-protein 1251 0.0
Os11g0206700 Guanine nucleotide binding protein (G-protein)... 574 e-164
Os06g0111400 Guanine nucleotide binding protein (G-protein)... 573 e-163
Os10g0117800 Guanine nucleotide binding protein (G-protein)... 345 7e-95
Os05g0333200 Guanine nucleotide-binding protein alpha-1 sub... 145 1e-34
>Os12g0593000 Similar to Extra-large G-protein
Length = 686
Score = 1251 bits (3238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/671 (91%), Positives = 613/671 (91%)
Query: 1 MAAAGEYSFAAEYDGPPLPYSLPRAIPLDLSRIXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
MAAAGEYSFAAEYDGPPLPYSLPRAIPLDLSRI
Sbjct: 1 MAAAGEYSFAAEYDGPPLPYSLPRAIPLDLSRIPLASLSSPTSPPPPTAPPLPVVRPLTP 60
Query: 61 XXXCSAESKRDXXXXXXXXXXXXXXATEVELVMRSERECAANQLRPEDVYVNGTKLSPEE 120
CSAESKRD ATEVELVMRSERECAANQLRPEDVYVNGTKLSPEE
Sbjct: 61 SSLCSAESKRDSLGRGSRVLRRLLSATEVELVMRSERECAANQLRPEDVYVNGTKLSPEE 120
Query: 121 LVMLQGCQCPPSKLRPGFYWYDKVSGFWGKEGHKPHCIISPNLNVGGALDQKASNGNTGI 180
LVMLQGCQCPPSKLRPGFYWYDKVSGFWGKEGHKPHCIISPNLNVGGALDQKASNGNTGI
Sbjct: 121 LVMLQGCQCPPSKLRPGFYWYDKVSGFWGKEGHKPHCIISPNLNVGGALDQKASNGNTGI 180
Query: 181 LINGREITKSELQMLKLAGVQCAGKPHFWVNADGTYQEEGQKTVKGKIWDKPIVKLLSPV 240
LINGREITKSELQMLKLAGVQCAGKPHFWVNADGTYQEEGQKTVKGKIWDKPIVKLLSPV
Sbjct: 181 LINGREITKSELQMLKLAGVQCAGKPHFWVNADGTYQEEGQKTVKGKIWDKPIVKLLSPV 240
Query: 241 LSLPTPNKANNQCGEEPVNVVNRPIPDYLEQRTIQKLLLVGSGTNTILKQAKFLYKSRPF 300
LSLPTPNKANNQCGEEPVNVVNRPIPDYLEQRTIQKLLLVGSGTNTILKQAKFLYKSRPF
Sbjct: 241 LSLPTPNKANNQCGEEPVNVVNRPIPDYLEQRTIQKLLLVGSGTNTILKQAKFLYKSRPF 300
Query: 301 SVEECEDLRLIIQSNIYNYLGILLEGRERFEEEAIADRRTTCQSDPSSSGHCEPELCNDI 360
SVEECEDLRLIIQSNIYNYLGILLEGRERFEEEAIADRRTTCQSDPSSSGHCEPELCNDI
Sbjct: 301 SVEECEDLRLIIQSNIYNYLGILLEGRERFEEEAIADRRTTCQSDPSSSGHCEPELCNDI 360
Query: 361 TEYYIAPRLKAFSDWILKAMAIGNLEDIFPAASREYAPMVEELWKDPAIQATYNRRSELP 420
TEYYIAPRLKAFSDWILKAMAIGNLEDIFPAASREYAPMVEELWKDPAIQATYNRRSELP
Sbjct: 361 TEYYIAPRLKAFSDWILKAMAIGNLEDIFPAASREYAPMVEELWKDPAIQATYNRRSELP 420
Query: 421 FLPSAASYFLDKAVDISRTEYELSDMDILYADGITSSDGLASTDFSFPQLALDGRGFDEP 480
FLPSAASYFLDKAVDISRTEYELSDMDILYADGITSSDGLASTDFSFPQLALDGRGFDEP
Sbjct: 421 FLPSAASYFLDKAVDISRTEYELSDMDILYADGITSSDGLASTDFSFPQLALDGRGFDEP 480
Query: 481 DPQDTLLRYQLIRINNKGLHENCKWLQMFDDVRLVIFCVAVSDYDEYYEDANGNVVNKMM 540
DPQDTLLRYQLIRINNKGLHENCKWLQMFDDVRLVIFCVAVSDYDEYYEDANGNVVNKMM
Sbjct: 481 DPQDTLLRYQLIRINNKGLHENCKWLQMFDDVRLVIFCVAVSDYDEYYEDANGNVVNKMM 540
Query: 541 ETRQLFESIALHPIFEQMDFLLLLTKFDILEQKIGKSPLTSCDWFSDFTPLVSRNLINXX 600
ETRQLFESIALHPIFEQMDFLLLLTKFDILEQKIGKSPLTSCDWFSDFTPLVSRNLIN
Sbjct: 541 ETRQLFESIALHPIFEQMDFLLLLTKFDILEQKIGKSPLTSCDWFSDFTPLVSRNLINGT 600
Query: 601 XXXXXXXXXXXXLAQMAGHYIAVKFKSVFQSFTERKLYVSYVNALDQESVRSAIRYGREI 660
LAQMAGHYIAVKFKSVFQSFTERKLYVSYVNALDQESVRSAIRYGREI
Sbjct: 601 SKSSRGSSTGSTLAQMAGHYIAVKFKSVFQSFTERKLYVSYVNALDQESVRSAIRYGREI 660
Query: 661 IKWEDEKPVFG 671
IKWEDEKPVFG
Sbjct: 661 IKWEDEKPVFG 671
>Os11g0206700 Guanine nucleotide binding protein (G-protein), alpha subunit
family protein
Length = 856
Score = 574 bits (1480), Expect = e-164, Method: Compositional matrix adjust.
Identities = 295/614 (48%), Positives = 405/614 (65%), Gaps = 33/614 (5%)
Query: 67 ESKRDXXXXXXXXXXXXXXATEVELVMRSERECAANQLRPEDVYVNGTKLSPEELVMLQG 126
ESKR EV ++++E+EC ANQLRPE + VNG L P+EL L
Sbjct: 236 ESKRSKLGKNSRTLSRLLSPLEVRQILKAEKECQANQLRPEQLIVNGCPLGPDELTDLLS 295
Query: 127 CQCPPSKLRPGFYWYDKVSGFWGKEGHKPHCIISPNLNVGGALDQKASNGNTGILINGRE 186
C PP KL+PG YWYDK SG WGKEG KP IIS NL+ G L ASNGNT + INGRE
Sbjct: 296 CSRPPQKLKPGKYWYDKESGLWGKEGEKPERIISSNLSFTGKLQANASNGNTQVYINGRE 355
Query: 187 ITKSELQMLKLAGVQCAGKPHFWVNADGTYQEEGQKTVKGKIWDKPIVKLLSPVLSLPTP 246
ITK EL++LK+A VQC HFWV DG Y+EEGQ +KGKIW+ + + + SLP P
Sbjct: 356 ITKIELKILKVANVQCPRDTHFWVYDDGRYEEEGQNNIKGKIWESALTRFACALFSLPVP 415
Query: 247 NKANNQCGEEPVNVVNRPIPDYLEQRTIQKLLLV---GSGTNTILKQAKFLYKSRPFSVE 303
+N+ +E V+ R +PDYL+Q+ IQKLLL+ G+GT+TI KQAK+LY +R F+ E
Sbjct: 416 PGNSNETRDE-VHYSARTVPDYLDQKRIQKLLLLGPDGAGTSTIFKQAKYLYGTR-FTQE 473
Query: 304 ECEDLRLIIQSNIYNYLGILLEGRERFEEEAIADRRTTCQSDPSSSGHCEPELCNDITEY 363
E E+++LIIQSN++ YLGILLEGRERFEEEA++ T D + ++ Y
Sbjct: 474 ELENIKLIIQSNMFKYLGILLEGRERFEEEALSRSNCTISEDEETQQDENKANGSNSCIY 533
Query: 364 YIAPRLKAFSDWILKAMAIGNLEDIFPAASREYAPMVEELWKDPAIQATYNRRSELPFLP 423
I PRLK FSDW+L +A+G+L+ FPAA+REYAP V+E+WKDPAIQATY R+ EL FLP
Sbjct: 534 SINPRLKKFSDWLLDIIAMGDLDAFFPAATREYAPFVDEMWKDPAIQATYKRKDELHFLP 593
Query: 424 SAASYFLDKAVDISRTEYELSDMDILYADGITSSDGLASTDFSFPQLALDGRG-FDEP-- 480
A YFL +A+++S EYE S+ D+++A+G+T +GLA F + ALD R EP
Sbjct: 594 DVAEYFLSRAIEVSSNEYEPSEKDVIFAEGVTQGNGLA-----FIEFALDDRSPMSEPYI 648
Query: 481 -DPQ---DTLLRYQLIRINNKGLHENCKWLQMFDDVRLVIFCVAVSDYDEYYEDANGN-- 534
+P+ L +YQLIR++ KG+++ CKW++MF+DVR+VIF VA+SDYD+ G+
Sbjct: 649 ENPEAHSQPLTKYQLIRVSAKGMNDGCKWVEMFEDVRMVIFSVALSDYDQVGPPVYGSSR 708
Query: 535 -VVNKMMETRQLFESIALHPIFEQMDFLLLLTKFDILEQKIGKSPLTSCDWFSDFTPLVS 593
++NKMM++++LFE+ P F F+L+L K+D+ E+KI ++PLT+C+WF+DF+P+ +
Sbjct: 709 PLLNKMMQSKELFEATIRQPCFCDTPFVLVLNKYDLFEEKINRAPLTTCEWFNDFSPVRT 768
Query: 594 RNLINXXXXXXXXXXXXXXLAQMAGHYIAVKFKSVFQSFTERKLYVSYVNALDQESVRSA 653
+ LAQ A +Y+AVKFK ++ T RKL+V A D+++V A
Sbjct: 769 HH-------------NNQSLAQQAYYYVAVKFKDLYYEHTGRKLFVWQARARDRQTVDEA 815
Query: 654 IRYGREIIKWEDEK 667
+Y REI++WEDEK
Sbjct: 816 FKYVREILRWEDEK 829
>Os06g0111400 Guanine nucleotide binding protein (G-protein), alpha subunit
family protein
Length = 867
Score = 573 bits (1477), Expect = e-163, Method: Compositional matrix adjust.
Identities = 292/614 (47%), Positives = 401/614 (65%), Gaps = 33/614 (5%)
Query: 67 ESKRDXXXXXXXXXXXXXXATEVELVMRSERECAANQLRPEDVYVNGTKLSPEELVMLQG 126
ESKR EV ++++E+EC ANQLRPE + +NG L+P+E+ L
Sbjct: 248 ESKRSKLGKGSRILSRLLSPLEVRQILKAEKECQANQLRPEQLIINGFPLNPDEMASLLS 307
Query: 127 CQCPPSKLRPGFYWYDKVSGFWGKEGHKPHCIISPNLNVGGALDQKASNGNTGILINGRE 186
CQ PP KL+PG YWYDK SG WGKEG KP ++S NL G L ASNGNT + +NGRE
Sbjct: 308 CQRPPQKLKPGRYWYDKESGLWGKEGEKPDRVVSTNLTFNGKLQPNASNGNTQVYMNGRE 367
Query: 187 ITKSELQMLKLAGVQCAGKPHFWVNADGTYQEEGQKTVKGKIWDKPIVKLLSPVLSLPTP 246
ITK EL++LK+A VQC HFWV DG Y+EEGQ +KGKIW+ P+ + + SLP P
Sbjct: 368 ITKIELRVLKIAQVQCPRDTHFWVYHDGGYEEEGQNNIKGKIWESPVTRFACALFSLPVP 427
Query: 247 NKANNQCGEEPVNVVNRPIPDYLEQRTIQKLLLVGS---GTNTILKQAKFLYKSRPFSVE 303
AN+ ++ R +PDYL+Q+ IQKLL++GS GT+TI KQAK LY +R F+ E
Sbjct: 428 -PANSDEPKDEAPYSARTVPDYLDQKRIQKLLILGSPGAGTSTIFKQAKLLYDTR-FTQE 485
Query: 304 ECEDLRLIIQSNIYNYLGILLEGRERFEEEAIADRRTTCQSDPSSSGHCEPELCNDITEY 363
E + ++L+IQSN++ YLGILLEGRERFEEEA+A D ++ +D Y
Sbjct: 486 ELDSIKLMIQSNMFKYLGILLEGRERFEEEALAGSNNPSSEDENTQHDGNKSNGSDSCIY 545
Query: 364 YIAPRLKAFSDWILKAMAIGNLEDIFPAASREYAPMVEELWKDPAIQATYNRRSELPFLP 423
I +LK FSDW+L +A+G+L+ FPAA+REYAP+VEE+WKDPAIQATY R+ EL FLP
Sbjct: 546 SINAKLKKFSDWLLDIIAMGDLDAFFPAATREYAPIVEEMWKDPAIQATYKRKDELHFLP 605
Query: 424 SAASYFLDKAVDISRTEYELSDMDILYADGITSSDGLASTDFSFPQLALDGRG------F 477
A YFL +A+++S EYE S+ DI+YA+G+T +GLA +F+ LD R
Sbjct: 606 DVAEYFLSRAIEVSSNEYEPSEKDIIYAEGVTQGNGLAFIEFT-----LDDRSPMSEMYT 660
Query: 478 DEPDPQD-TLLRYQLIRINNKGLHENCKWLQMFDDVRLVIFCVAVSDYDEYYEDANGN-- 534
D +P TL +YQLIR++ KG++E CKW++MF+DV +VIF VA+SDYD+ ++G
Sbjct: 661 DNHEPHSQTLNKYQLIRVSAKGMNEGCKWVEMFEDVSMVIFSVALSDYDQLGAPSSGGNS 720
Query: 535 -VVNKMMETRQLFESIALHPIFEQMDFLLLLTKFDILEQKIGKSPLTSCDWFSDFTPLVS 593
+VNKM+++R LFE+ P F M F+L+L KFD+ E+KIG+ PL++C+WFSDF PL +
Sbjct: 721 PLVNKMIQSRDLFEATIRQPCFRDMPFVLVLNKFDLFEEKIGRVPLSTCEWFSDFCPLRT 780
Query: 594 RNLINXXXXXXXXXXXXXXLAQMAGHYIAVKFKSVFQSFTERKLYVSYVNALDQESVRSA 653
+ LA A +Y+A+KFK ++ + T+RKL+V A D+ +V A
Sbjct: 781 HH-------------NNQSLAHQAFYYVAMKFKELYAACTDRKLFVWQARARDRLTVDEA 827
Query: 654 IRYGREIIKWEDEK 667
++ RE++KWEDEK
Sbjct: 828 FKFIREVLKWEDEK 841
>Os10g0117800 Guanine nucleotide binding protein (G-protein), alpha subunit
family protein
Length = 440
Score = 345 bits (885), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 194/441 (43%), Positives = 279/441 (63%), Gaps = 35/441 (7%)
Query: 238 SPVLSLPTPNKANNQCGEEPVNVVNRPIPDYLEQRTIQKLLLVG---SGTNTILKQAKFL 294
+ + SLP P E+ +R +P+YLEQ+ +QKLLLVG SG++TI KQAKFL
Sbjct: 1 ATLFSLPIPRGLK----EDTTLYSSRFVPEYLEQKKVQKLLLVGLEGSGSSTIFKQAKFL 56
Query: 295 YKSRPFSVEECEDLRLIIQSNIYNYLGILLEGRERFEEEAIADRRTTCQSDPSSSGHCEP 354
Y + FS EE +L+L+IQSN+Y YL LLE RE FE+EA+ + + S+ G EP
Sbjct: 57 YGTE-FSPEEILNLKLMIQSNVYKYLSTLLEWRECFEDEALEEEKELGMSNHKGDG--EP 113
Query: 355 ELCNDITEYY-IAPRLKAFSDWILKAMAIGNLEDIFPAASREYAPMVEELWKDPAIQATY 413
+ + Y + RL F++W+L+ +A+GNL+ FPAA+REYAP+VEE+WKDPAIQATY
Sbjct: 114 KAVQSTSSLYSLNQRLMHFANWLLEIVALGNLDAFFPAATREYAPIVEEVWKDPAIQATY 173
Query: 414 NRRSELPFLPSAASYFLDKAVDISRTEYELSDMDILYADGITSSDGLASTDFSFPQLALD 473
R++EL FLP ASYFLD+ V+IS EYE ++ DILYA+G+ +GL++ +FS LD
Sbjct: 174 KRKNELHFLPDVASYFLDRVVEISSNEYEPTETDILYAEGVNQWNGLSTLEFS-----LD 228
Query: 474 GRG------FDEPDPQDTLLRYQLIRINNKGLHENCKWLQMFDDVRLVIFCVAVSDYDEY 527
RG D+ +YQLIR+N+KGL K L M +D+R +IFC++++DYD+
Sbjct: 229 DRGPLSDSYADKAGNPAIQTKYQLIRMNSKGLTGGFKCLGMLEDIRAIIFCISLADYDQT 288
Query: 528 YEDANGNVVNKMMETRQLFESIALHPIFEQMDFLLLLTKFDILEQKIGKSPLTSCDWFSD 587
+ ++G NKM+ +R LFE + HP FE +LLL K+D E+KI + PLT C+WF+D
Sbjct: 289 WVQSSGEPCNKMIASRDLFEDVIRHPSFEDTPCVLLLNKYDAFEEKISRVPLTVCEWFAD 348
Query: 588 FTPLVSRNLINXXXXXXXXXXXXXXLAQMAGHYIAVKFKSVFQSFTE-RKLYVSYVNALD 646
F+P+ + LA A +Y+AVKFK ++ S + RKL+V AL+
Sbjct: 349 FSPVRPHH------------TSQTSLASHAYYYVAVKFKDLYSSVADGRKLFVFQTKALE 396
Query: 647 QESVRSAIRYGREIIKWEDEK 667
+ +V A RY RE+++W+D K
Sbjct: 397 RRTVDDAFRYIREVLRWDDVK 417
>Os05g0333200 Guanine nucleotide-binding protein alpha-1 subunit (GP-alpha-1)
Length = 390
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 171/337 (50%), Gaps = 50/337 (14%)
Query: 259 NVVNRPIPDYLEQRTIQKLLLVG---SGTNTILKQAKFLYKSRPFSVEECEDLRLIIQSN 315
++ R + + ++ I KLLL+G SG +TI KQ K L+++ F E +I +N
Sbjct: 34 DIDRRILQETKAEQHIHKLLLLGAGESGKSTIFKQIKLLFQT-GFDEAELRSYTSVIHAN 92
Query: 316 IYNYLGILLEGRERFEEEAIADRRTTCQSDPSSSGHCEPELCNDITEYYIAPRLKAFSDW 375
+Y + IL EG A + +SD S +Y I+P + +
Sbjct: 93 VYQTIKILYEG---------AKELSQVESDSS--------------KYVISPDNQEIGEK 129
Query: 376 ILKAMAIGNLEDIFPAASREYAPMVEELWKDPAIQATYNRRSELPFLPSAASYFLDKAVD 435
+ + G L+ +P ++E V+ LW+DPAIQ TY R S L LP A YF++
Sbjct: 130 L--SDIDGRLD--YPLLNKELVLDVKRLWQDPAIQETYLRGSILQ-LPDCAQYFMENLDR 184
Query: 436 ISRTEYELSDMDILYADGITSSDGLASTDFSFPQLALDGRGFDEPDPQDTLLRYQLIRIN 495
++ Y + D+LYA ++G+ FS + + RG + Y+L +
Sbjct: 185 LAEAGYVPTKEDVLYAR--VRTNGVVQIQFS--PVGENKRGGE---------VYRLYDVG 231
Query: 496 NKGLHENCKWLQMFDDVRLVIFCVAVSDYDEY-YEDANGNVVNKMMETRQLFESIALHPI 554
+ +E KW+ +F+ V VIFC A+S+YD+ +ED N +MMET++LF+ +
Sbjct: 232 GQR-NERRKWIHLFEGVNAVIFCAAISEYDQMLFEDETKN---RMMETKELFDWVLKQRC 287
Query: 555 FEQMDFLLLLTKFDILEQKIGKSPLTSCDWFSDFTPL 591
FE+ F+L L KFDI E+KI K PL+ C+WF D+ P+
Sbjct: 288 FEKTSFILFLNKFDIFEKKIQKVPLSVCEWFKDYQPI 324
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.136 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 21,287,103
Number of extensions: 870597
Number of successful extensions: 1598
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1578
Number of HSP's successfully gapped: 5
Length of query: 686
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 578
Effective length of database: 11,396,689
Effective search space: 6587286242
Effective search space used: 6587286242
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 159 (65.9 bits)