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Os12g0593000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Extra-large G-protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13 (0.0128) R2 : 0.485
β1 : 0.845 (0.047) R2dD : 0.378 R2D : 0.206
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.373 (0.0274) R2dN8 : 0.279 R2N8 : 0.107
σ : 0.241
deviance : 26.62
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_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.5 0.223 13 0.842 0.212 0.37 0.56 0.127 0.411 22.5 72.83 1143 -- --
22.52 0.221 13 0.851 0.212 0.371 0.533 -- 0.411 22.5 73 1143 -- --
23.53 0.226 13 0.855 0.267 0.347 -- -0.308 0.41 21.7 73.93 958 -- --
23.67 0.227 13 0.841 0.209 0.351 -- -- 0.412 22.2 73.14 1137 -- --
24.91 0.232 12.9 0.817 -- 0.349 -- 0.0245 0.409 -- 73.96 1475 -- --
24.47 0.232 13 0.863 0.141 -- 0.505 -- 0.374 21.9 -- -- -- --
25.4 0.236 13 0.844 0.145 -- -- -- 0.373 21.1 -- -- -- --
24.9 0.232 12.9 0.823 -- 0.361 -- -- 0.407 -- 74.73 1480 -- --
40.13 0.295 13 -- 0.225 0.549 -- -- 0.409 21.7 84 2419 -- --
26.62 0.241 13 0.845 -- -- -- -- 0.373 -- -- -- -- --
44.19 0.311 13 -- 0.145 -- -- -- 0.279 21.5 -- -- -- --
41.56 0.3 13 -- -- 0.471 -- -- 0.366 -- 84.41 1540 -- --
45.43 0.315 13 -- -- -- -- -- 0.279 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.38 wind 1.0 43200 < th dose independent rect. 4 3
2 21.44 wind 1.0 43200 > th dose independent rect. 4 3
3 21.46 wind 1.0 43200 > th dose independent rect. 5 1
4 21.49 temperature 20.0 4320 > th dose independent rect. 20 3
6 21.55 temperature 20.0 4320 < th dose independent rect. 20 3
12 21.67 wind 5.0 4320 > th dose dependent rect. 20 8
22 21.76 wind 5.0 4320 > th dose independent sin 12 NA
29 21.79 wind 5.0 4320 < th dose independent rect. 16 13
30 21.80 wind 5.0 4320 < th dose independent sin 13 NA
34 21.80 wind 5.0 4320 > th dose independent rect. 16 13
36 21.82 wind 5.0 4320 > th dose independent rect. 20 4
42 21.84 wind 5.0 4320 > th dose dependent rect. 21 3
48 21.87 wind 5.0 4320 < th dose independent rect. 20 4
66 21.93 wind 5.0 4320 > th dose independent rect. 20 6
87 21.99 temperature 20.0 270 < th dose independent rect. 19 9
91 22.00 wind 5.0 4320 < th dose independent rect. 20 7
96 22.01 temperature 20.0 270 < th dose independent rect. 21 7
119 22.07 wind 5.0 4320 > th dose independent rect. 16 18
120 22.07 temperature 20.0 270 > th dose independent rect. 7 22
121 22.07 wind 1.0 43200 < th dose dependent rect. 5 2
133 22.11 temperature 20.0 270 > th dose independent sin 14 NA
134 22.11 humidity 70.0 4320 > th dose independent rect. 15 1
139 22.11 wind 5.0 4320 > th dose dependent sin 12 NA
155 22.14 temperature 20.0 4320 > th dose independent sin 18 NA
160 22.14 wind 5.0 4320 < th dose independent rect. 16 18
162 22.15 temperature 20.0 270 > th dose independent rect. 15 12
166 22.16 temperature 20.0 270 < th dose independent sin 13 NA
197 22.19 temperature 20.0 90 < th dose independent rect. 23 6
203 22.20 temperature 20.0 4320 < th dose independent sin 18 NA
213 22.20 temperature 20.0 270 < th dose independent rect. 7 21
228 22.22 temperature 20.0 720 < th dose independent rect. 19 4
237 22.23 humidity 80.0 1440 > th dose independent rect. 11 2
244 22.23 wind 5.0 4320 > th dose dependent rect. 20 14
269 22.26 humidity 80.0 1440 < th dose independent rect. 11 2
274 22.26 temperature 20.0 720 > th dose independent rect. 7 15
277 22.26 temperature 20.0 10 > th dose independent rect. 7 23
301 22.29 humidity 80.0 1440 > th dose independent rect. 10 4
326 22.30 humidity 80.0 1440 > th dose dependent rect. 10 4
339 22.31 temperature 20.0 720 < th dose dependent rect. 13 10
347 22.32 temperature 20.0 720 > th dose independent rect. 15 8
364 22.33 temperature 20.0 720 < th dose independent rect. 19 2
373 22.33 wind 7.0 4320 < th dose independent rect. 20 14
381 22.33 wind 1.0 43200 < th dose dependent rect. 3 5
383 22.33 temperature 20.0 720 < th dose dependent rect. 16 7
398 22.34 wind 7.0 4320 > th dose independent rect. 20 14
402 22.34 temperature 20.0 4320 > th dose independent rect. 6 18
406 22.34 humidity 70.0 4320 > th dose dependent rect. 10 1
434 22.36 temperature 20.0 720 < th dose independent rect. 8 15
445 22.37 humidity 80.0 4320 > th dose independent rect. 9 1
462 22.38 humidity 80.0 4320 < th dose independent rect. 9 3
463 22.38 wind 7.0 4320 > th dose independent rect. 6 4
475 22.38 humidity 80.0 4320 < th dose independent rect. 21 18
481 22.39 temperature 20.0 1440 > th dose independent rect. 4 1
482 22.39 temperature 20.0 1440 < th dose independent rect. 4 1
483 22.39 humidity 70.0 4320 < th dose independent rect. 15 1
517 22.40 temperature 20.0 720 > th dose independent rect. 13 8
537 22.41 temperature 20.0 90 < th dose independent rect. 23 10
548 22.41 temperature 20.0 270 > th dose independent rect. 13 23
572 22.42 wind 5.0 4320 > th dose dependent rect. 16 18
588 22.43 temperature 20.0 4320 < th dose independent rect. 6 18
589 22.43 radiation 10.0 4320 < th dose dependent rect. 8 1
592 22.44 wind 7.0 4320 < th dose independent rect. 6 4
596 22.44 humidity 90.0 30 < th dose independent rect. 1 6
610 22.44 humidity 90.0 30 < th dose independent rect. 12 19
612 22.44 humidity 80.0 1440 < th dose independent rect. 10 20
615 22.44 wind 5.0 4320 > th dose dependent rect. 9 1
616 22.44 temperature 20.0 720 < th dose dependent rect. 21 2
620 22.45 temperature 20.0 10 < th dose independent sin 9 NA
647 22.45 temperature 20.0 90 > th dose independent rect. 9 20
653 22.45 wind 5.0 4320 > th dose dependent rect. 14 20
675 22.46 humidity 80.0 1440 > th dose independent rect. 10 20
680 22.46 precipitation 0.1 14400 > th dose dependent rect. 16 2
709 22.47 humidity 80.0 1440 > th dose independent rect. 22 17
713 22.47 temperature 20.0 1440 > th dose independent rect. 3 19
734 22.47 humidity 80.0 1440 > th dose dependent rect. 1 15
737 22.48 precipitation 0.1 14400 > th dose independent rect. 15 1
774 22.49 temperature 20.0 720 > th dose independent sin 18 NA
777 22.49 temperature 20.0 720 < th dose independent sin 20 NA
778 22.49 precipitation 0.1 14400 < th dose independent rect. 15 1
794 22.49 humidity 70.0 4320 > th dose independent rect. 5 11
799 22.49 humidity 80.0 1440 > th dose independent rect. 23 12
811 22.49 precipitation 0.1 14400 < th dose dependent rect. 15 1
812 22.49 temperature 20.0 4320 < th dose dependent rect. 21 2
879 22.51 humidity 80.0 1440 < th dose independent rect. 22 13
901 22.51 wind 5.0 4320 > th dose independent rect. 20 22
938 22.52 temperature 20.0 1440 < th dose independent rect. 3 19
952 22.52 humidity 90.0 4320 > th dose dependent rect. 8 2
963 22.53 precipitation 0.1 14400 < th dose independent rect. 12 5
999 22.53 temperature 20.0 270 > th dose independent rect. 4 23