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Os06g0111400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Guanine nucleotide binding protein (G-protein), alpha subunit family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.0189) R2 : 0.368
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.795 (0.0491) R2dC : 0.366 R2C : 0.36
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0862 (0.0397) R2dN8 : 0.00846 R2N8 : 0.00245
σ : 0.355
deviance : 57.73
__
_____
C
peak time of C : 18.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
45.26 0.316 10.8 0.579 1.01 0.502 0.234 -0.715 0.174 19.5 80.04 841 -- --
45.92 0.316 10.8 0.517 1.01 0.476 0.513 -- 0.168 19.5 82.03 818 -- --
45.17 0.313 10.8 0.557 1.02 0.522 -- -0.802 0.174 19.4 81 834 -- --
46.64 0.318 10.8 0.494 1 0.466 -- -- 0.163 19.4 82.92 820 -- --
83.66 0.426 10.7 0.569 -- 0.267 -- -0.218 0.192 -- 74.55 2802 -- --
50.73 0.334 10.8 0.505 0.799 -- 0.439 -- 0.14 19 -- -- -- --
51.21 0.335 10.8 0.497 0.801 -- -- -- 0.142 18.9 -- -- -- --
81.77 0.421 10.8 0.511 -- 0.407 -- -- 0.221 -- 80.01 1353 -- --
52.98 0.339 10.8 -- 0.966 0.498 -- -- 0.115 19.6 83 885 -- --
84.85 0.43 10.8 0.48 -- -- -- -- 0.126 -- -- -- -- --
57.73 0.355 10.8 -- 0.795 -- -- -- 0.0862 18.9 -- -- -- --
85.85 0.432 10.8 -- -- 0.631 -- -- 0.121 -- 80 1350 -- --
90.93 0.445 10.8 -- -- -- -- -- 0.0731 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 43.63 humidity 80.0 720 < th dose dependent rect. 19 3
4 43.75 humidity 70.0 720 > th dose dependent rect. 19 4
18 43.91 humidity 80.0 720 < th dose dependent rect. 18 13
33 44.07 humidity 80.0 720 > th dose independent rect. 20 2
51 44.33 humidity 80.0 720 < th dose independent rect. 18 3
122 44.86 precipitation 0.1 270 > th dose independent rect. 2 2
139 44.92 radiation 1.0 1440 > th dose independent rect. 9 3
141 44.92 precipitation 0.1 270 > th dose dependent rect. 2 2
151 44.94 humidity 90.0 720 < th dose dependent sin 13 NA
198 45.14 temperature 30.0 270 < th dose independent rect. 2 10
201 45.15 precipitation 0.1 270 < th dose independent rect. 16 18
202 45.15 precipitation 0.1 270 < th dose dependent rect. 16 18
216 45.22 temperature 15.0 270 > th dose independent rect. 16 19
233 45.26 precipitation 0.1 270 < th dose independent rect. 13 23
235 45.26 precipitation 0.1 270 < th dose dependent rect. 13 23
246 45.29 humidity 50.0 720 > th dose dependent rect. 17 15
247 45.30 humidity 90.0 30 < th dose independent rect. 16 20
284 45.43 humidity 90.0 10 < th dose independent rect. 18 18
291 45.45 humidity 80.0 720 < th dose independent sin 16 NA
292 45.45 humidity 80.0 720 > th dose independent rect. 12 11
299 45.46 humidity 70.0 720 > th dose independent rect. 17 15
313 45.49 humidity 80.0 720 > th dose independent rect. 18 13
334 45.54 wind 7.0 270 < th dose independent rect. 16 18
342 45.55 radiation 10.0 1440 < th dose dependent rect. 9 8
351 45.56 precipitation 0.1 90 < th dose independent rect. 3 9
359 45.56 precipitation 0.1 90 < th dose dependent rect. 3 9
362 45.57 humidity 50.0 270 > th dose independent rect. 11 5
364 45.57 humidity 80.0 720 > th dose independent rect. 2 20
368 45.57 humidity 90.0 720 > th dose dependent rect. 10 14
402 45.64 humidity 80.0 720 > th dose independent rect. 18 21
409 45.66 radiation 1.0 1440 < th dose independent rect. 9 3
412 45.66 radiation 1.0 1440 < th dose dependent rect. 9 3
417 45.67 precipitation 0.1 270 > th dose independent rect. 24 4
418 45.67 precipitation 0.1 10 < th dose independent rect. 4 8
426 45.67 precipitation 0.1 10 < th dose dependent rect. 4 8
441 45.70 wind 9.0 10 < th dose independent rect. 4 8
451 45.70 humidity 90.0 720 > th dose dependent rect. 15 9
463 45.72 temperature 15.0 90 > th dose independent rect. 3 9
465 45.72 humidity 80.0 720 > th dose independent rect. 11 20
488 45.75 humidity 80.0 720 > th dose independent sin 16 NA
494 45.75 radiation 10.0 1440 < th dose dependent rect. 9 19
510 45.78 wind 9.0 10 < th dose independent rect. 12 16
528 45.80 temperature 10.0 10 > th dose independent rect. 4 8
531 45.80 atmosphere 995.0 10 > th dose independent rect. 4 8
532 45.80 atmosphere 1015.0 10 < th dose independent rect. 4 8
533 45.80 temperature 10.0 10 > th dose independent rect. 12 16
542 45.82 wind 9.0 270 < th dose independent rect. 10 6
548 45.82 wind 9.0 270 < th dose dependent rect. 16 18
549 45.83 humidity 80.0 1440 > th dose independent rect. 11 3
568 45.85 wind 1.0 270 > th dose independent rect. 10 6
569 45.85 temperature 10.0 270 > th dose independent rect. 10 6
570 45.85 atmosphere 1015.0 270 < th dose independent rect. 10 6
580 45.86 humidity 80.0 720 < th dose independent rect. 9 13
589 45.87 precipitation 0.1 270 < th dose independent rect. 10 6
595 45.87 precipitation 0.1 270 < th dose dependent rect. 10 6
600 45.88 atmosphere 1005.0 270 > th dose independent rect. 16 17
615 45.89 humidity 70.0 720 > th dose dependent rect. 2 22
617 45.90 wind 7.0 90 < th dose independent rect. 3 9
628 45.91 humidity 90.0 10 < th dose independent rect. 20 16
629 45.91 atmosphere 995.0 270 > th dose independent rect. 16 18
631 45.91 atmosphere 1015.0 270 < th dose dependent rect. 11 5
640 45.92 radiation 20.0 1440 < th dose dependent rect. 11 3
648 45.93 wind 9.0 90 < th dose independent rect. 12 15
655 45.93 humidity 60.0 720 > th dose dependent sin 14 NA
658 45.93 temperature 10.0 270 > th dose dependent rect. 10 6
687 45.95 wind 9.0 10 < th dose dependent rect. 4 8
699 45.96 atmosphere 995.0 90 > th dose independent rect. 3 9
700 45.96 atmosphere 1015.0 90 < th dose independent rect. 3 9
701 45.96 temperature 10.0 90 > th dose independent rect. 12 15
719 45.97 atmosphere 995.0 270 > th dose independent rect. 15 20
736 45.98 humidity 80.0 1440 < th dose independent rect. 11 3
743 45.98 humidity 80.0 720 > th dose independent rect. 23 23
745 45.98 humidity 70.0 1440 > th dose dependent rect. 11 3
752 45.98 wind 9.0 10 < th dose dependent rect. 18 18
754 45.99 wind 1.0 14400 > th dose independent rect. 1 1
784 46.01 precipitation 0.1 270 > th dose independent rect. 21 7
790 46.01 temperature 30.0 270 < th dose independent rect. 16 19
792 46.01 radiation 10.0 1440 < th dose dependent sin 20 NA
838 46.04 humidity 80.0 720 < th dose independent rect. 9 18
839 46.04 radiation 40.0 270 < th dose independent rect. 16 19
850 46.04 humidity 70.0 720 > th dose dependent rect. 11 21
852 46.05 humidity 80.0 720 > th dose independent no NA NA
858 46.05 humidity 50.0 270 > th dose independent rect. 22 18
870 46.05 humidity 70.0 720 > th dose dependent rect. 18 21
895 46.07 humidity 80.0 1440 > th dose independent rect. 1 15
900 46.07 temperature 10.0 270 > th dose dependent rect. 11 4
956 46.09 radiation 10.0 1440 < th dose dependent rect. 13 1
964 46.10 temperature 15.0 270 > th dose independent rect. 16 6
965 46.10 humidity 80.0 1440 > th dose independent rect. 9 6
966 46.10 humidity 80.0 1440 < th dose independent rect. 8 7
971 46.10 temperature 15.0 10 > th dose independent rect. 18 18
985 46.11 wind 1.0 1440 < th dose independent rect. 6 1
989 46.11 humidity 80.0 1440 < th dose independent rect. 6 9
991 46.11 humidity 80.0 1440 < th dose independent rect. 2 13
993 46.11 temperature 15.0 270 > th dose independent rect. 7 14
994 46.11 precipitation 0.1 270 < th dose independent rect. 7 14
999 46.11 humidity 80.0 720 > th dose independent rect. 4 23