BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0578400 Os12g0578400|AK060767
(539 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0578400 Glycoside hydrolase family 79, N-terminal protein 1083 0.0
Os03g0211700 Glycoside hydrolase family 79, N-terminal protein 667 0.0
Os06g0179000 Glycoside hydrolase family 79, N-terminal protein 510 e-145
Os02g0802200 Glycoside hydrolase family 79, N-terminal protein 508 e-144
Os07g0598400 Glycoside hydrolase family 79, N-terminal protein 480 e-135
>Os12g0578400 Glycoside hydrolase family 79, N-terminal protein
Length = 539
Score = 1083 bits (2802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/539 (97%), Positives = 525/539 (97%)
Query: 1 MRLWFLIPLLLCFPTLIRSEDYSDVTIVVRGAETIASTSNEFICATIDWWPPEKCNYDQC 60
MRLWFLIPLLLCFPTLIRSEDYSDVTIVVRGAETIASTSNEFICATIDWWPPEKCNYDQC
Sbjct: 1 MRLWFLIPLLLCFPTLIRSEDYSDVTIVVRGAETIASTSNEFICATIDWWPPEKCNYDQC 60
Query: 61 PWGQASILNLDLTNPLLAKAIQAFSPLRIRLGGSLQDQVVYGTPNLGSPCTPXXXXXXXX 120
PWGQASILNLDLTNPLLAKAIQAFSPLRIRLGGSLQDQVVYGTPNLGSPCTP
Sbjct: 61 PWGQASILNLDLTNPLLAKAIQAFSPLRIRLGGSLQDQVVYGTPNLGSPCTPFSKSSSGL 120
Query: 121 XXXXXXCITMERWDAINKIFMDTGAVVTFGLNALQGRQQMGRGVWGGAWNSSNAREFMEY 180
CITMERWDAINKIFMDTGAVVTFGLNALQGRQQMGRGVWGGAWNSSNAREFMEY
Sbjct: 121 FGFSQGCITMERWDAINKIFMDTGAVVTFGLNALQGRQQMGRGVWGGAWNSSNAREFMEY 180
Query: 181 TVSMNYPIDSWEFGNELSGSGIGASVGAEQYGKDIIELKNIISQLYGNSRKPLVVAPGGF 240
TVSMNYPIDSWEFGNELSGSGIGASVGAEQYGKDIIELKNIISQLYGNSRKPLVVAPGGF
Sbjct: 181 TVSMNYPIDSWEFGNELSGSGIGASVGAEQYGKDIIELKNIISQLYGNSRKPLVVAPGGF 240
Query: 241 YDQKWYAQLLDISGPNVLDTMTHHIYNLGAGNDPQVANRILNPQYLSQSSDTFRDLQMTI 300
YDQKWYAQLLDISGPNVLDTMTHHIYNLGAGNDPQVANRILNPQYLSQSSDTFRDLQMTI
Sbjct: 241 YDQKWYAQLLDISGPNVLDTMTHHIYNLGAGNDPQVANRILNPQYLSQSSDTFRDLQMTI 300
Query: 301 QRHGPWSAPWVGEAGGAYNSGSRKVSNTFLNSFWYLDQLGQSAKYDTKVYCRQTLIGGNY 360
QRHGPWSAPWVGEAGGAYNSGSRKVSNTFLNSFWYLDQLGQSAKYDTKVYCRQTLIGGNY
Sbjct: 301 QRHGPWSAPWVGEAGGAYNSGSRKVSNTFLNSFWYLDQLGQSAKYDTKVYCRQTLIGGNY 360
Query: 361 GLLDTETFVPNPDYYSALLWHRLMGKGVISLDTSGSSYLRAYAHCGKQKGGVALLMLNLN 420
GLLDTETFVPNPDYYSALLWHRLMGKGVISLDTSGSSYLRAYAHCGKQKGGVALLMLNLN
Sbjct: 361 GLLDTETFVPNPDYYSALLWHRLMGKGVISLDTSGSSYLRAYAHCGKQKGGVALLMLNLN 420
Query: 421 KNMGFMVSVRNDLNINFREMAGIKRDNSFVHGLKRTVSWVGSKASDGLEKREEYHLTPQD 480
KNMGFMVSVRNDLNINFREMAGIKRDNSFVHGLKRTVSWVGSKASDGLEKREEYHLTPQD
Sbjct: 421 KNMGFMVSVRNDLNINFREMAGIKRDNSFVHGLKRTVSWVGSKASDGLEKREEYHLTPQD 480
Query: 481 GNPFARTVLLNGAPLQLTGDGDIPSLPPVMVSVNSPIYVAPLSIAFVVFPDFEAEGCER 539
GNPFARTVLLNGAPLQLTGDGDIPSLPPVMVSVNSPIYVAPLSIAFVVFPDFEAEGCER
Sbjct: 481 GNPFARTVLLNGAPLQLTGDGDIPSLPPVMVSVNSPIYVAPLSIAFVVFPDFEAEGCER 539
>Os03g0211700 Glycoside hydrolase family 79, N-terminal protein
Length = 541
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/541 (55%), Positives = 403/541 (74%), Gaps = 5/541 (0%)
Query: 1 MRLWFLIPLLLCFPTLI---RSEDYSDVTIVVRGAETIASTSNEFICATIDWWPPEKCNY 57
M + L+ + +C L+ ++ + T++V+G+ IA T+ +ICATIDWWPPEKCNY
Sbjct: 1 MEVRLLLLVFICLHALLWAASAQQPEEATVIVKGSTKIAETNKNYICATIDWWPPEKCNY 60
Query: 58 DQCPWGQASILNLDLTNPLLAKAIQAFSPLRIRLGGSLQDQVVYGTPNLGSPCTPXXXXX 117
+QCPWGQ+SILNLDL +P LA+AIQAF LRIRLGGSLQD+VVY SPC P
Sbjct: 61 NQCPWGQSSILNLDLDHPFLAQAIQAFDNLRIRLGGSLQDRVVYDV-GTNSPCAPFTNMS 119
Query: 118 XXXXXXXXXCITMERWDAINKIFMDTGAVVTFGLNALQGRQQMGRGVWGGAWNSSNAREF 177
C++M+RWD +N +F TGA++TFGLNAL GR + R W WNS+NA F
Sbjct: 120 NGLFGFSDGCLSMDRWDKLNALFQKTGAIITFGLNALYGRYNVRRSFWASKWNSTNAYNF 179
Query: 178 MEYTVSMNYPIDSWEFGNELSGSGIGASVGAEQYGKDIIELKNIISQLYGNS-RKPLVVA 236
++YT+S YP+DSWE+GNELSG GIGA V A YGKD IELK+I QLY +P ++A
Sbjct: 180 VKYTISKGYPVDSWEYGNELSGHGIGARVDATLYGKDAIELKSIFQQLYKAPLSQPSLLA 239
Query: 237 PGGFYDQKWYAQLLDISGPNVLDTMTHHIYNLGAGNDPQVANRILNPQYLSQSSDTFRDL 296
PGGF+DQ+WY QLL SG V+ +THHIYNLG GND + +IL+P+YL +S DT+RD+
Sbjct: 240 PGGFFDQQWYTQLLQTSGHGVVSALTHHIYNLGGGNDAHLIRKILDPKYLDRSEDTYRDM 299
Query: 297 QMTIQRHGPWSAPWVGEAGGAYNSGSRKVSNTFLNSFWYLDQLGQSAKYDTKVYCRQTLI 356
Q+T+QRHG W++ WV E+GG +N+G VSNTF+NS WYLDQLG ++KY+TK++CRQTLI
Sbjct: 300 QLTLQRHGTWASAWVSESGGVFNNGGELVSNTFINSIWYLDQLGMASKYNTKIFCRQTLI 359
Query: 357 GGNYGLLDTETFVPNPDYYSALLWHRLMGKGVISLDTSGSSYLRAYAHCGKQKGGVALLM 416
GG+YGLLDT+TF+PNPDYYSALLWHRLMG+ V+S+D + LRAYAHC KQ+ G+ LL+
Sbjct: 360 GGHYGLLDTQTFLPNPDYYSALLWHRLMGREVLSVDINAPRKLRAYAHCRKQQQGITLLL 419
Query: 417 LNLNKNMGFMVSVRNDLNINFREMAGIKRDNSFVHGLKRTVSWVGSKASDGLEKREEYHL 476
+NL+ G+ V+++ND+N++ + A + + NSF H L+R VSW+G K S + +REEYHL
Sbjct: 420 INLSNTTGYNVTLQNDINVSLDKTASLHKHNSFSHSLRRAVSWLGRKPSSDVARREEYHL 479
Query: 477 TPQDGNPFARTVLLNGAPLQLTGDGDIPSLPPVMVSVNSPIYVAPLSIAFVVFPDFEAEG 536
T +DG+ ++T+LLNGAPL+L+ DG +P++ P +V+VNSP+Y+AP SIAFVV P FEA+
Sbjct: 480 TAKDGDLQSKTMLLNGAPLELSDDGGVPAMSPALVAVNSPVYLAPTSIAFVVLPMFEAKA 539
Query: 537 C 537
C
Sbjct: 540 C 540
>Os06g0179000 Glycoside hydrolase family 79, N-terminal protein
Length = 526
Score = 510 bits (1314), Expect = e-145, Method: Compositional matrix adjust.
Identities = 256/533 (48%), Positives = 336/533 (63%), Gaps = 21/533 (3%)
Query: 11 LCFPTLIRSEDYSDVTIVVRGAE---TIASTSNEFICATIDWWPPEKCNYDQCPWGQASI 67
LCF L+R ++ + V G + IA+T +F+CAT+DWWPP+KC+Y C WG AS+
Sbjct: 10 LCFLALLRLGGAAEAVVGVAGVDGRRAIAATDEDFVCATMDWWPPDKCDYGTCSWGLASL 69
Query: 68 LNLDLTNPLLAKAIQA-FSPLRIRLGGSLQDQVVYGTPNLGSPCTPXXXXXXXXXXXXXX 126
LNLDL+N +L AI+ FSPL++RLGGSLQD++VYGT + G PC P
Sbjct: 70 LNLDLSNKILLNAIRGTFSPLKLRLGGSLQDKLVYGTGDGGGPCAPFVKNTSEMFGFTQG 129
Query: 127 CITMERWDAINKIFMDTGAVVTFGLNALQGRQQMGRGVWGGAWNSSNAREFMEYTVSMNY 186
C+ + RWD +N F +GA + FGLNAL GR + G GG W+ +NA + YT S Y
Sbjct: 130 CLPLHRWDELNAFFQKSGARIVFGLNALNGRVPLPDGSMGGPWDYTNAASLIRYTASKGY 189
Query: 187 PIDSWEFGNELSGSGIGASVGAEQYGKDIIELKNIISQLY-GNSRKPLVVAPGGFYDQKW 245
I WE GNELSGSG+G VGA+QY D+I LK+++ +Y GN KPLV+APGGF+D W
Sbjct: 190 KIHGWELGNELSGSGVGTKVGADQYAADVIALKSLVDTIYQGNPSKPLVLAPGGFFDAGW 249
Query: 246 YAQLLDISGPNVLDTMTHHIYNLGAGNDPQVANRILNPQYLSQSSDTFRDLQMTIQRHGP 305
+ +++ + PN+L+ +THHIYNLG G D + +ILNP YL TF +LQ ++ G
Sbjct: 250 FTEVIVKTRPNLLNVVTHHIYNLGPGVDTHLIEKILNPSYLDGMVSTFSNLQGILKSAGT 309
Query: 306 WSAPWVGEAGGAYNSGSRKVSNTFLNSFWYLDQLGQSAKYDTKVYCRQTLIGGNYGLLDT 365
+ WVGE+GGAYNSG V+++F+ SFW+LDQLG SAKYDTK YCRQ+LIGGNYGLL+
Sbjct: 310 SAVAWVGESGGAYNSGRHLVTDSFVFSFWFLDQLGMSAKYDTKSYCRQSLIGGNYGLLNK 369
Query: 366 ETFVPNPDYYSALLWHRLMGKGVISLDTSGSSYLRAYAHCGKQKGGVALLMLNLNKNMGF 425
ETF PNPDYYSALLWHRLMG V+S +G++ +R YAHC K G+ LL++NL+ N
Sbjct: 370 ETFQPNPDYYSALLWHRLMGTKVLSATFNGTNMIRTYAHCAKDSPGITLLLINLSGNTTS 429
Query: 426 MVSVRNDLNINFREMAGIKRDNSFVHGLKRTVSWVGSKASDGLEKREEYHLTPQDGNPFA 485
VSV ++ G + H K GS REEYHLT +DG+ +
Sbjct: 430 QVSVTSE---------GAHANTVKKHSRKTRHLAAGS-------MREEYHLTAKDGSLQS 473
Query: 486 RTVLLNGAPLQLTGDGDIPSLPPVMVSVNSPIYVAPLSIAFVVFPDFEAEGCE 538
+ +LLNG L +G+IP L PV V PI VAP SI F +F A C
Sbjct: 474 QVMLLNGRALVADENGEIPRLEPVKVDAAQPIAVAPYSIVFAHIHNFPAPACS 526
>Os02g0802200 Glycoside hydrolase family 79, N-terminal protein
Length = 541
Score = 508 bits (1307), Expect = e-144, Method: Compositional matrix adjust.
Identities = 249/505 (49%), Positives = 324/505 (64%), Gaps = 11/505 (2%)
Query: 35 IASTSNEFICATIDWWPPEKCNYDQCPWGQASILNLDLTNPLLAKAIQAFSPLRIRLGGS 94
IA T +F+CAT+DWWPP+KC+Y C WG A++LN+DL+N +L A++AFSPL++RLGGS
Sbjct: 47 IAVTDEDFVCATLDWWPPDKCDYGTCSWGLATLLNMDLSNKILLNAVKAFSPLKLRLGGS 106
Query: 95 LQDQVVYGTPNLGSPCTPXXXXXXXXXXXXXXCITMERWDAINKIFMDTGAVVTFGLNAL 154
LQD ++Y T + PCTP C+ + RWD +N F +GA + FGLNAL
Sbjct: 107 LQDVLIYDTGDPRQPCTPFTKNSSAMFGFTQGCLPLHRWDELNAFFQKSGAKIIFGLNAL 166
Query: 155 QGRQQMGRGVWGGAWNSSNAREFMEYTVSMNYPIDSWEFGNELSGSGIGASVGAEQYGKD 214
GR M GG WN +NA F+ YTVS Y I WE GNELSGSG+GA V A+QY +D
Sbjct: 167 NGRVPMSDDSLGGPWNYTNAASFIRYTVSKGYDIHGWELGNELSGSGVGARVDADQYAQD 226
Query: 215 IIELKNIISQLY-GNSRKPLVVAPGGFYDQKWYAQLLDISGPNVLDTMTHHIYNLGAGND 273
++ LK II Y G++ KPLV+APGGF+D W+ +L+ + PN +D MTHHIYNLG G D
Sbjct: 227 VLALKQIIDNSYQGHASKPLVIAPGGFFDAAWFTELISRTKPNQMDVMTHHIYNLGPGVD 286
Query: 274 PQVANRILNPQYLSQSSDTFRDLQMTIQRHGPWSAPWVGEAGGAYNSGSRKVSNTFLNSF 333
+ ++IL+P YL + TF LQ ++ G + WVGEAGGAYNSG V++ F+ SF
Sbjct: 287 THLIDKILDPSYLDGEAGTFSSLQGILKSAGTSTVAWVGEAGGAYNSGHHLVTDAFVFSF 346
Query: 334 WYLDQLGQSAKYDTKVYCRQTLIGGNYGLLDTETFVPNPDYYSALLWHRLMGKGVISLDT 393
WYLDQLG S+KYDTK YCRQTLIGGNYGLL+T TF PNPDYYSALLW+RLMG V+S
Sbjct: 347 WYLDQLGMSSKYDTKTYCRQTLIGGNYGLLNTTTFEPNPDYYSALLWNRLMGTKVLSATF 406
Query: 394 SGSSYLRAYAHCGKQKGGVALLMLNLNKNMGFMVSVRNDLNINFREMAGIKRDNSFVHGL 453
+G++ +RAYAHC + G+ LL++NL+ N + V ++ + +R + GL
Sbjct: 407 NGTNKIRAYAHCARDSRGITLLLINLSGNNTNHIYVTSEGVQPYSTKKEGRRRFGRIPGL 466
Query: 454 KRTVSWVGSKASDGLEKREEYHLTPQDGNPFARTVLLNGAPLQLTGDGDIPSLPPVMVSV 513
+ REEYHLTP+DG+ ++ VLLNG L +G+IP L PV V
Sbjct: 467 GEEAQLI----------REEYHLTPKDGSLQSQHVLLNGNVLAPDANGEIPKLEPVQVEG 516
Query: 514 NSPIYVAPLSIAFVVFPDFEAEGCE 538
PI VAP SI F P F A C
Sbjct: 517 TQPITVAPYSIVFAHIPRFYAPACR 541
>Os07g0598400 Glycoside hydrolase family 79, N-terminal protein
Length = 529
Score = 480 bits (1236), Expect = e-135, Method: Compositional matrix adjust.
Identities = 241/512 (47%), Positives = 320/512 (62%), Gaps = 38/512 (7%)
Query: 36 ASTSNEFICATIDWWPPEKCNYDQCPWGQASILNLDLTNPLLAKAIQAFSPLRIRLGGSL 95
+ T + F+CAT+DWWP +KCNY CPW ASI+NLDL N +L A++AF+ LRIRLGGSL
Sbjct: 44 SRTDDNFVCATLDWWPRDKCNYGMCPWYNASIINLDLNNTILNNAVKAFNSLRIRLGGSL 103
Query: 96 QDQVVYGTPNLGSPCTPXXXXXXXXXXXXXXCITMERWDAINKIFMDTGAVVTFGLNALQ 155
QDQV Y + C C+ M RWD +N F T VTFGLNAL+
Sbjct: 104 QDQVTYKVGSNYGDCRSFQRDDGGLFGFTDGCLEMNRWDELNVFFKRTNTTVTFGLNALK 163
Query: 156 GRQQMGRG---VWGGAWNSSNAREFMEYTVSMNYPIDSWEFGNELSGSGIGASVGAEQYG 212
GR++ G ++ G W++ NA + M YT Y ++SWE GNELSGSG+ A V A QYG
Sbjct: 164 GRRKAAGGKDTLYSGDWDARNALDLMRYTAGKGYRVESWELGNELSGSGVAARVAAAQYG 223
Query: 213 KDIIELKNIISQLYGNSRK-PLVVAPGGFYDQKWYAQLLDISGPNVLDTMTHHIYNLGAG 271
+D+ L+ + ++YG + P V+APGGFYD W++++L +SG +D +THHIYNLG+G
Sbjct: 224 RDVAVLRKAVERVYGGGGEVPKVLAPGGFYDGAWFSEMLRVSGRGAVDGVTHHIYNLGSG 283
Query: 272 NDPQVANRILNPQYLSQSSDTFRDLQMTIQRHGPWSAPWVGEAGGAYNSGSRKVSNTFLN 331
D +A ++ +P YL Q TFRD+ T++ GPWS+PWVGE+GGAYNSG + VS+ ++N
Sbjct: 284 KDRDLARKMQDPGYLDQVEKTFRDMAATVRGSGPWSSPWVGESGGAYNSGGKGVSDRYVN 343
Query: 332 SFWYLDQLGQSAKYDTKVYCRQTLIGGNYGLLDTETFVPNPDYYSALLWHRLMGKGVISL 391
FWYLDQLG SA + T+VYCRQ L+GGNY LL+T TFVPNPDYY ALLWHRLMG V+
Sbjct: 344 GFWYLDQLGMSAAHGTRVYCRQALVGGNYCLLNTTTFVPNPDYYGALLWHRLMGPVVLKA 403
Query: 392 DTS----GSSYLRAYAHCGKQKGGVALLMLNLNKNMGFMVSVRNDLNINFREMAGIKRDN 447
T+ GS YLR+YAHC ++K GV +L++NL+ F VSV
Sbjct: 404 ATTAGGGGSPYLRSYAHCSREKPGVTVLLINLSNATAFDVSVAGGA-------------- 449
Query: 448 SFVHGLKRTVSWVGSKASDGLEKREEYHLTPQDGNPFARTVLLNGAPLQLTGDGDIPSLP 507
+G+ G +REEYHL+P G+ ++ VLLNG L L G+IP L
Sbjct: 450 ------------LGAAPCGG--RREEYHLSPLGGDIRSQVVLLNGEALALGPGGEIPELR 495
Query: 508 PVMV--SVNSPIYVAPLSIAFVVFPDFEAEGC 537
P +V +P+ VA IAFV F +F+A C
Sbjct: 496 PAVVGDGCAAPLRVAARGIAFVRFTEFKAPAC 527
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.137 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 19,417,516
Number of extensions: 858524
Number of successful extensions: 1497
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1486
Number of HSP's successfully gapped: 5
Length of query: 539
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 433
Effective length of database: 11,501,117
Effective search space: 4979983661
Effective search space used: 4979983661
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)