Os06g0179000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase family 79, N-terminal protein.
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Os06g0179000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycoside hydrolase family 79, N-terminal protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 574.84 | 1.13 | 6.79 | -8.04 | 0.0845 | 3.18 | -1.74 | -2.18 | -1.68 | 19.6 | 24.26 | 1752 | -- | -- |
| 574.22 | 1.12 | 6.69 | -7.46 | 0.182 | 3.1 | 1.74 | -- | -1.44 | 9.21 | 25 | 1870 | -- | -- |
| 577.52 | 1.12 | 6.85 | -8.43 | 0.293 | 3.38 | -- | -4.08 | -1.72 | 13.9 | 24.85 | 1837 | -- | -- |
| 579.38 | 1.12 | 6.68 | -7.34 | 0.368 | 3 | -- | -- | -1.4 | 13.2 | 25.22 | 1879 | -- | -- |
| 582.16 | 1.12 | 6.79 | -8.13 | -- | 3.32 | -- | -3.14 | -1.63 | -- | 24.97 | 1799 | -- | -- |
| 858.16 | 1.37 | 6.63 | -6.46 | 0.522 | -- | -1.63 | -- | -1.08 | 18.2 | -- | -- | -- | -- |
| 863.42 | 1.38 | 6.63 | -6.44 | 0.534 | -- | -- | -- | -1.08 | 17.1 | -- | -- | -- | -- |
| 584.96 | 1.13 | 6.7 | -7.38 | -- | 3.02 | -- | -- | -1.43 | -- | 24.99 | 1812 | -- | -- |
| 1879.99 | 2.02 | 6.4 | -- | 0.599 | 1.21 | -- | -- | -0.0461 | 16 | 29.09 | 1422 | -- | -- |
| 878.36 | 1.38 | 6.62 | -6.46 | -- | -- | -- | -- | -1.1 | -- | -- | -- | -- | -- |
| 1957.19 | 2.07 | 6.47 | -- | 0.649 | -- | -- | -- | -0.365 | 16.8 | -- | -- | -- | -- |
| 1898.82 | 2.03 | 6.42 | -- | -- | 1.63 | -- | -- | -0.199 | -- | 28.7 | 1976 | -- | -- |
| 1979.51 | 2.08 | 6.46 | -- | -- | -- | -- | -- | -0.379 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 542.87 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 12 |
| 4 | 547.88 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 11 |
| 5 | 548.15 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 12 |
| 18 | 555.08 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 19 |
| 21 | 555.80 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 19 |
| 25 | 556.97 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 17 | 19 |
| 30 | 560.10 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 36 | 561.09 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 39 | 561.46 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 17 |
| 46 | 562.40 | wind | 9.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 59 | 563.25 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 17 |
| 60 | 563.49 | wind | 9.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 76 | 566.08 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 15 |
| 79 | 566.57 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 85 | 568.09 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 14 |
| 87 | 568.20 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 8 |
| 88 | 568.26 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 12 |
| 89 | 568.32 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 10 |
| 105 | 569.37 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 6 |
| 108 | 569.83 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 3 |
| 112 | 570.19 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 16 |
| 116 | 570.51 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 16 |
| 141 | 573.02 | radiation | 10.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 145 | 573.81 | wind | 7.0 | 43200 | > th | dose dependent | sin | 10 | NA |
| 148 | 574.32 | wind | 9.0 | 43200 | > th | dose dependent | sin | 12 | NA |
| 164 | 574.94 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 166 | 575.43 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 16 | 10 |
| 178 | 576.12 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 193 | 577.14 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 5 |
| 198 | 577.37 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 10 | 19 |
| 209 | 577.54 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 17 | NA |
| 215 | 577.65 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 230 | 578.08 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 14 | 19 |
| 234 | 578.19 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 255 | 578.34 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 10 | 11 |
| 257 | 578.43 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 14 | 7 |
| 273 | 578.59 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 14 | 14 |
| 294 | 578.75 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 23 | 22 |
| 296 | 578.77 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 338 | 579.51 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 348 | 579.56 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 404 | 580.33 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 436 | 580.67 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 13 |
| 445 | 580.80 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 525 | 582.46 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 545 | 582.79 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 570 | 583.73 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 12 | 4 |
| 580 | 584.03 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 582 | 584.12 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 626 | 584.93 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 14 | 18 |
| 635 | 585.19 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 17 |
| 721 | 586.53 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 5 | 5 |
| 723 | 586.58 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 725 | 586.62 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 878 | 589.03 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 10 | 8 |
| 903 | 589.37 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 12 | 6 |
| 918 | 589.52 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 923 | 589.54 | wind | 5.0 | 43200 | > th | dose dependent | sin | 5 | NA |
| 932 | 589.64 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 13 | 5 |
| 943 | 589.75 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 10 | 8 |
| 957 | 589.89 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 15 | 17 |
| 971 | 590.06 | atmosphere | 1000.0 | 43200 | < th | dose dependent | sin | 23 | NA |
| 986 | 590.22 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 16 | 2 |