BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0179000 Os06g0179000|AK065263
(526 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0179000 Glycoside hydrolase family 79, N-terminal protein 980 0.0
Os02g0802200 Glycoside hydrolase family 79, N-terminal protein 763 0.0
Os12g0578400 Glycoside hydrolase family 79, N-terminal protein 501 e-142
Os03g0211700 Glycoside hydrolase family 79, N-terminal protein 491 e-139
Os07g0598400 Glycoside hydrolase family 79, N-terminal protein 471 e-133
>Os06g0179000 Glycoside hydrolase family 79, N-terminal protein
Length = 526
Score = 980 bits (2534), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/487 (97%), Positives = 474/487 (97%)
Query: 40 TDEDFVCATMDWWPPDKCDYGTCSWGLASXXXXXXXXXXXXXAIRGTFSPLKLRLGGSLQ 99
TDEDFVCATMDWWPPDKCDYGTCSWGLAS AIRGTFSPLKLRLGGSLQ
Sbjct: 40 TDEDFVCATMDWWPPDKCDYGTCSWGLASLLNLDLSNKILLNAIRGTFSPLKLRLGGSLQ 99
Query: 100 DKLVYGTGDGGGPCAPFVKNTSEMFGFTQGCLPLHRWDELNAFFQKSGARIVFGLNALNG 159
DKLVYGTGDGGGPCAPFVKNTSEMFGFTQGCLPLHRWDELNAFFQKSGARIVFGLNALNG
Sbjct: 100 DKLVYGTGDGGGPCAPFVKNTSEMFGFTQGCLPLHRWDELNAFFQKSGARIVFGLNALNG 159
Query: 160 RVPLPDGSMGGPWDYTNAASLIRYTASKGYKIHGWELGNELSGSGVGTKVGADQYAADVI 219
RVPLPDGSMGGPWDYTNAASLIRYTASKGYKIHGWELGNELSGSGVGTKVGADQYAADVI
Sbjct: 160 RVPLPDGSMGGPWDYTNAASLIRYTASKGYKIHGWELGNELSGSGVGTKVGADQYAADVI 219
Query: 220 ALKSLVDTIYQGNPSKPLVLAPGGFFDAGWFTEVIVKTRPNLLNVVTHHIYNLGPGVDTH 279
ALKSLVDTIYQGNPSKPLVLAPGGFFDAGWFTEVIVKTRPNLLNVVTHHIYNLGPGVDTH
Sbjct: 220 ALKSLVDTIYQGNPSKPLVLAPGGFFDAGWFTEVIVKTRPNLLNVVTHHIYNLGPGVDTH 279
Query: 280 LIEKILNPSYLDGMVSTFSNLQGILKSAGTSAVAWVGESGGAYNSGRHLVTDSFVFSFWF 339
LIEKILNPSYLDGMVSTFSNLQGILKSAGTSAVAWVGESGGAYNSGRHLVTDSFVFSFWF
Sbjct: 280 LIEKILNPSYLDGMVSTFSNLQGILKSAGTSAVAWVGESGGAYNSGRHLVTDSFVFSFWF 339
Query: 340 LDQLGMSAKYDTKSYCRQSLIGGNYGLLNKETFQPNPDYYSALLWHRLMGTKVLSATFNG 399
LDQLGMSAKYDTKSYCRQSLIGGNYGLLNKETFQPNPDYYSALLWHRLMGTKVLSATFNG
Sbjct: 340 LDQLGMSAKYDTKSYCRQSLIGGNYGLLNKETFQPNPDYYSALLWHRLMGTKVLSATFNG 399
Query: 400 TNMIRTYAHCAKDSPGITLLLINLSGNTTSQVSVTSEGAHANTVKKHSRKTRHLAAGSMR 459
TNMIRTYAHCAKDSPGITLLLINLSGNTTSQVSVTSEGAHANTVKKHSRKTRHLAAGSMR
Sbjct: 400 TNMIRTYAHCAKDSPGITLLLINLSGNTTSQVSVTSEGAHANTVKKHSRKTRHLAAGSMR 459
Query: 460 EEYHLTAKDGSLQSQVMLLNGRALVADENGEIPRLEPVKVDAAQPIAVAPYSIVFAHIHN 519
EEYHLTAKDGSLQSQVMLLNGRALVADENGEIPRLEPVKVDAAQPIAVAPYSIVFAHIHN
Sbjct: 460 EEYHLTAKDGSLQSQVMLLNGRALVADENGEIPRLEPVKVDAAQPIAVAPYSIVFAHIHN 519
Query: 520 FPAPACS 526
FPAPACS
Sbjct: 520 FPAPACS 526
>Os02g0802200 Glycoside hydrolase family 79, N-terminal protein
Length = 541
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/492 (73%), Positives = 408/492 (82%), Gaps = 7/492 (1%)
Query: 40 TDEDFVCATMDWWPPDKCDYGTCSWGLASXXXXXXXXXXXXXAIRGTFSPLKLRLGGSLQ 99
TDEDFVCAT+DWWPPDKCDYGTCSWGLA+ A++ FSPLKLRLGGSLQ
Sbjct: 50 TDEDFVCATLDWWPPDKCDYGTCSWGLATLLNMDLSNKILLNAVKA-FSPLKLRLGGSLQ 108
Query: 100 DKLVYGTGDGGGPCAPFVKNTSEMFGFTQGCLPLHRWDELNAFFQKSGARIVFGLNALNG 159
D L+Y TGD PC PF KN+S MFGFTQGCLPLHRWDELNAFFQKSGA+I+FGLNALNG
Sbjct: 109 DVLIYDTGDPRQPCTPFTKNSSAMFGFTQGCLPLHRWDELNAFFQKSGAKIIFGLNALNG 168
Query: 160 RVPLPDGSMGGPWDYTNAASLIRYTASKGYKIHGWELGNELSGSGVGTKVGADQYAADVI 219
RVP+ D S+GGPW+YTNAAS IRYT SKGY IHGWELGNELSGSGVG +V ADQYA DV+
Sbjct: 169 RVPMSDDSLGGPWNYTNAASFIRYTVSKGYDIHGWELGNELSGSGVGARVDADQYAQDVL 228
Query: 220 ALKSLVDTIYQGNPSKPLVLAPGGFFDAGWFTEVIVKTRPNLLNVVTHHIYNLGPGVDTH 279
ALK ++D YQG+ SKPLV+APGGFFDA WFTE+I +T+PN ++V+THHIYNLGPGVDTH
Sbjct: 229 ALKQIIDNSYQGHASKPLVIAPGGFFDAAWFTELISRTKPNQMDVMTHHIYNLGPGVDTH 288
Query: 280 LIEKILNPSYLDGMVSTFSNLQGILKSAGTSAVAWVGESGGAYNSGRHLVTDSFVFSFWF 339
LI+KIL+PSYLDG TFS+LQGILKSAGTS VAWVGE+GGAYNSG HLVTD+FVFSFW+
Sbjct: 289 LIDKILDPSYLDGEAGTFSSLQGILKSAGTSTVAWVGEAGGAYNSGHHLVTDAFVFSFWY 348
Query: 340 LDQLGMSAKYDTKSYCRQSLIGGNYGLLNKETFQPNPDYYSALLWHRLMGTKVLSATFNG 399
LDQLGMS+KYDTK+YCRQ+LIGGNYGLLN TF+PNPDYYSALLW+RLMGTKVLSATFNG
Sbjct: 349 LDQLGMSSKYDTKTYCRQTLIGGNYGLLNTTTFEPNPDYYSALLWNRLMGTKVLSATFNG 408
Query: 400 TNMIRTYAHCAKDSPGITLLLINLSGNTTSQVSVTSEGAHANTVKKHSRKTRHLAAG--- 456
TN IR YAHCA+DS GITLLLINLSGN T+ + VTSEG + KK R+ G
Sbjct: 409 TNKIRAYAHCARDSRGITLLLINLSGNNTNHIYVTSEGVQPYSTKKEGRRRFGRIPGLGE 468
Query: 457 ---SMREEYHLTAKDGSLQSQVMLLNGRALVADENGEIPRLEPVKVDAAQPIAVAPYSIV 513
+REEYHLT KDGSLQSQ +LLNG L D NGEIP+LEPV+V+ QPI VAPYSIV
Sbjct: 469 EAQLIREEYHLTPKDGSLQSQHVLLNGNVLAPDANGEIPKLEPVQVEGTQPITVAPYSIV 528
Query: 514 FAHIHNFPAPAC 525
FAHI F APAC
Sbjct: 529 FAHIPRFYAPAC 540
>Os12g0578400 Glycoside hydrolase family 79, N-terminal protein
Length = 539
Score = 501 bits (1291), Expect = e-142, Method: Compositional matrix adjust.
Identities = 248/503 (49%), Positives = 323/503 (64%), Gaps = 18/503 (3%)
Query: 40 TDEDFVCATMDWWPPDKCDYGTCSWGLASXXXXXXXXXXXXXAIRGTFSPLKLRLGGSLQ 99
T +F+CAT+DWWPP+KC+Y C WG AS AI+ FSPL++RLGGSLQ
Sbjct: 38 TSNEFICATIDWWPPEKCNYDQCPWGQASILNLDLTNPLLAKAIQA-FSPLRIRLGGSLQ 96
Query: 100 DKLVYGTGDGGGPCAPFVKNTSEMFGFTQGCLPLHRWDELNAFFQKSGARIVFGLNALNG 159
D++VYGT + G PC PF K++S +FGF+QGC+ + RWD +N F +GA + FGLNAL G
Sbjct: 97 DQVVYGTPNLGSPCTPFSKSSSGLFGFSQGCITMERWDAINKIFMDTGAVVTFGLNALQG 156
Query: 160 RVPLPDGSMGGPWDYTNAASLIRYTASKGYKIHGWELGNELSGSGVGTKVGADQYAADVI 219
R + G GG W+ +NA + YT S Y I WE GNELSGSG+G VGA+QY D+I
Sbjct: 157 RQQMGRGVWGGAWNSSNAREFMEYTVSMNYPIDSWEFGNELSGSGIGASVGAEQYGKDII 216
Query: 220 ALKSLVDTIYQGNPSKPLVLAPGGFFDAGWFTEVIVKTRPNLLNVVTHHIYNLGPGVDTH 279
LK+++ +Y GN KPLV+APGGF+D W+ +++ + PN+L+ +THHIYNLG G D
Sbjct: 217 ELKNIISQLY-GNSRKPLVVAPGGFYDQKWYAQLLDISGPNVLDTMTHHIYNLGAGNDPQ 275
Query: 280 LIEKILNPSYLDGMVSTFSNLQGILKSAGTSAVAWVGESGGAYNSGRHLVTDSFVFSFWF 339
+ +ILNP YL TF +LQ ++ G + WVGE+GGAYNSG V+++F+ SFW+
Sbjct: 276 VANRILNPQYLSQSSDTFRDLQMTIQRHGPWSAPWVGEAGGAYNSGSRKVSNTFLNSFWY 335
Query: 340 LDQLGMSAKYDTKSYCRQSLIGGNYGLLNKETFQPNPDYYSALLWHRLMGTKVLSATFNG 399
LDQLG SAKYDTK YCRQ+LIGGNYGLL+ ETF PNPDYYSALLWHRLMG V+S +G
Sbjct: 336 LDQLGQSAKYDTKVYCRQTLIGGNYGLLDTETFVPNPDYYSALLWHRLMGKGVISLDTSG 395
Query: 400 TNMIRTYAHCAKDSPGITLLLINLSGNTTSQVSVTSE---------GAHANTVKKHSRKT 450
++ +R YAHC K G+ LL++NL+ N VSV ++ G + H K
Sbjct: 396 SSYLRAYAHCGKQKGGVALLMLNLNKNMGFMVSVRNDLNINFREMAGIKRDNSFVHGLKR 455
Query: 451 RHLAAGS-------MREEYHLTAKDGSLQSQVMLLNGRALVADENGEIPRLEPVKVDAAQ 503
GS REEYHLT +DG+ ++ +LLNG L +G+IP L PV V
Sbjct: 456 TVSWVGSKASDGLEKREEYHLTPQDGNPFARTVLLNGAPLQLTGDGDIPSLPPVMVSVNS 515
Query: 504 PIAVAPYSIVFAHIHNFPAPACS 526
PI VAP SI F +F A C
Sbjct: 516 PIYVAPLSIAFVVFPDFEAEGCE 538
>Os03g0211700 Glycoside hydrolase family 79, N-terminal protein
Length = 541
Score = 491 bits (1265), Expect = e-139, Method: Compositional matrix adjust.
Identities = 243/503 (48%), Positives = 322/503 (64%), Gaps = 18/503 (3%)
Query: 40 TDEDFVCATMDWWPPDKCDYGTCSWGLASXXXXXXXXXXXXXAIRGTFSPLKLRLGGSLQ 99
T+++++CAT+DWWPP+KC+Y C WG +S AI+ F L++RLGGSLQ
Sbjct: 41 TNKNYICATIDWWPPEKCNYNQCPWGQSSILNLDLDHPFLAQAIQA-FDNLRIRLGGSLQ 99
Query: 100 DKLVYGTGDGGGPCAPFVKNTSEMFGFTQGCLPLHRWDELNAFFQKSGARIVFGLNALNG 159
D++VY G PCAPF ++ +FGF+ GCL + RWD+LNA FQK+GA I FGLNAL G
Sbjct: 100 DRVVYDVGTNS-PCAPFTNMSNGLFGFSDGCLSMDRWDKLNALFQKTGAIITFGLNALYG 158
Query: 160 RVPLPDGSMGGPWDYTNAASLIRYTASKGYKIHGWELGNELSGSGVGTKVGADQYAADVI 219
R + W+ TNA + ++YT SKGY + WE GNELSG G+G +V A Y D I
Sbjct: 159 RYNVRRSFWASKWNSTNAYNFVKYTISKGYPVDSWEYGNELSGHGIGARVDATLYGKDAI 218
Query: 220 ALKSLVDTIYQGNPSKPLVLAPGGFFDAGWFTEVIVKTRPNLLNVVTHHIYNLGPGVDTH 279
LKS+ +Y+ S+P +LAPGGFFD W+T+++ + +++ +THHIYNLG G D H
Sbjct: 219 ELKSIFQQLYKAPLSQPSLLAPGGFFDQQWYTQLLQTSGHGVVSALTHHIYNLGGGNDAH 278
Query: 280 LIEKILNPSYLDGMVSTFSNLQGILKSAGTSAVAWVGESGGAYNSGRHLVTDSFVFSFWF 339
LI KIL+P YLD T+ ++Q L+ GT A AWV ESGG +N+G LV+++F+ S W+
Sbjct: 279 LIRKILDPKYLDRSEDTYRDMQLTLQRHGTWASAWVSESGGVFNNGGELVSNTFINSIWY 338
Query: 340 LDQLGMSAKYDTKSYCRQSLIGGNYGLLNKETFQPNPDYYSALLWHRLMGTKVLSATFNG 399
LDQLGM++KY+TK +CRQ+LIGG+YGLL+ +TF PNPDYYSALLWHRLMG +VLS N
Sbjct: 339 LDQLGMASKYNTKIFCRQTLIGGHYGLLDTQTFLPNPDYYSALLWHRLMGREVLSVDINA 398
Query: 400 TNMIRTYAHCAKDSPGITLLLINLSG----NTTSQVSVTSEGAHANTVKKHSRKTRHLAA 455
+R YAHC K GITLLLINLS N T Q + ++ KH+ + L
Sbjct: 399 PRKLRAYAHCRKQQQGITLLLINLSNTTGYNVTLQNDINVSLDKTASLHKHNSFSHSLRR 458
Query: 456 G------------SMREEYHLTAKDGSLQSQVMLLNGRALVADENGEIPRLEPVKVDAAQ 503
+ REEYHLTAKDG LQS+ MLLNG L ++G +P + P V
Sbjct: 459 AVSWLGRKPSSDVARREEYHLTAKDGDLQSKTMLLNGAPLELSDDGGVPAMSPALVAVNS 518
Query: 504 PIAVAPYSIVFAHIHNFPAPACS 526
P+ +AP SI F + F A ACS
Sbjct: 519 PVYLAPTSIAFVVLPMFEAKACS 541
>Os07g0598400 Glycoside hydrolase family 79, N-terminal protein
Length = 529
Score = 471 bits (1213), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/496 (48%), Positives = 304/496 (61%), Gaps = 22/496 (4%)
Query: 40 TDEDFVCATMDWWPPDKCDYGTCSWGLASXXXXXXXXXXXXXAIRGTFSPLKLRLGGSLQ 99
TD++FVCAT+DWWP DKC+YG C W AS A++ F+ L++RLGGSLQ
Sbjct: 46 TDDNFVCATLDWWPRDKCNYGMCPWYNASIINLDLNNTILNNAVK-AFNSLRIRLGGSLQ 104
Query: 100 DKLVYGTGDGGGPCAPFVKNTSEMFGFTQGCLPLHRWDELNAFFQKSGARIVFGLNALNG 159
D++ Y G G C F ++ +FGFT GCL ++RWDELN FF+++ + FGLNAL G
Sbjct: 105 DQVTYKVGSNYGDCRSFQRDDGGLFGFTDGCLEMNRWDELNVFFKRTNTTVTFGLNALKG 164
Query: 160 RVPLPDGS---MGGPWDYTNAASLIRYTASKGYKIHGWELGNELSGSGVGTKVGADQYAA 216
R G G WD NA L+RYTA KGY++ WELGNELSGSGV +V A QY
Sbjct: 165 RRKAAGGKDTLYSGDWDARNALDLMRYTAGKGYRVESWELGNELSGSGVAARVAAAQYGR 224
Query: 217 DVIALKSLVDTIYQGNPSKPLVLAPGGFFDAGWFTEVIVKTRPNLLNVVTHHIYNLGPGV 276
DV L+ V+ +Y G P VLAPGGF+D WF+E++ + ++ VTHHIYNLG G
Sbjct: 225 DVAVLRKAVERVYGGGGEVPKVLAPGGFYDGAWFSEMLRVSGRGAVDGVTHHIYNLGSGK 284
Query: 277 DTHLIEKILNPSYLDGMVSTFSNLQGILKSAGTSAVAWVGESGGAYNSGRHLVTDSFVFS 336
D L K+ +P YLD + TF ++ ++ +G + WVGESGGAYNSG V+D +V
Sbjct: 285 DRDLARKMQDPGYLDQVEKTFRDMAATVRGSGPWSSPWVGESGGAYNSGGKGVSDRYVNG 344
Query: 337 FWFLDQLGMSAKYDTKSYCRQSLIGGNYGLLNKETFQPNPDYYSALLWHRLMGTKVLSAT 396
FW+LDQLGMSA + T+ YCRQ+L+GGNY LLN TF PNPDYY ALLWHRLMG VL A
Sbjct: 345 FWYLDQLGMSAAHGTRVYCRQALVGGNYCLLNTTTFVPNPDYYGALLWHRLMGPVVLKAA 404
Query: 397 FN----GTNMIRTYAHCAKDSPGITLLLINLSGNTTSQVSVTSEGAHANTVKKHSRKTRH 452
G+ +R+YAHC+++ PG+T+LLINLS T VSV A
Sbjct: 405 TTAGGGGSPYLRSYAHCSREKPGVTVLLINLSNATAFDVSVAGGALGA------------ 452
Query: 453 LAAGSMREEYHLTAKDGSLQSQVMLLNGRALVADENGEIPRLEPVKV--DAAQPIAVAPY 510
G REEYHL+ G ++SQV+LLNG AL GEIP L P V A P+ VA
Sbjct: 453 APCGGRREEYHLSPLGGDIRSQVVLLNGEALALGPGGEIPELRPAVVGDGCAAPLRVAAR 512
Query: 511 SIVFAHIHNFPAPACS 526
I F F APAC+
Sbjct: 513 GIAFVRFTEFKAPACA 528
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.135 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,087,076
Number of extensions: 800255
Number of successful extensions: 1596
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1584
Number of HSP's successfully gapped: 5
Length of query: 526
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 421
Effective length of database: 11,553,331
Effective search space: 4863952351
Effective search space used: 4863952351
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)