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Os03g0211700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glycoside hydrolase family 79, N-terminal protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.45 (0.0327) R2 : 0.261
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.08 (0.0849) R2dC : 0.262 R2C : 0.261
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.000144 (0.0688) R2dN8 : 9.22e-09 R2N8 : -0.000537
σ : 0.617
deviance : 173.82
__
_____
C
peak time of C : 16.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
139.9 0.556 6.51 -0.697 1.08 -0.702 -1.79 1.56 -0.274 16.5 20 1446 -- --
143.5 0.558 6.5 -0.529 1.11 -0.774 -1.88 -- -0.248 15.9 20 1330 -- --
137.26 0.546 6.49 -0.684 0.789 -0.806 -- 3.59 -0.248 18.2 10.59 1761 -- --
152.69 0.576 6.49 -0.515 1.1 -0.67 -- -- -0.198 16.6 19.28 1429 -- --
147.98 0.567 6.48 -0.614 -- -1.67 -- 3.98 -0.269 -- 9.355 1969 -- --
159.57 0.592 6.45 -0.419 1.07 -- -1.92 -- -0.0381 16.4 -- -- -- --
168.79 0.608 6.46 -0.437 1.07 -- -- -- -0.0485 16.8 -- -- -- --
161.69 0.592 6.49 -0.44 -- -1.73 -- -- -0.247 -- 8.218 2043 -- --
157.97 0.585 6.48 -- 1.12 -0.718 -- -- -0.125 17 9.998 1465 -- --
229.21 0.707 6.45 -0.477 -- -- -- -- -0.0762 -- -- -- -- --
173.82 0.617 6.45 -- 1.08 -- -- -- 0.000144 16.8 -- -- -- --
165.86 0.6 6.48 -- -- -1.78 -- -- -0.208 -- 10 2040 -- --
235.21 0.716 6.44 -- -- -- -- -- -0.0233 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 129.08 temperature 25 720 > th dose dependent rect. 21 4
24 134.01 temperature 20 720 < th dose independent rect. 3 4
32 135.23 temperature 25 720 > th dose independent rect. 21 3
44 136.16 temperature 25 720 < th dose independent rect. 18 10
51 136.56 radiation 30 4320 < th dose independent rect. 4 4
52 136.57 radiation 30 4320 < th dose independent rect. 6 2
53 136.57 radiation 20 1440 < th dose independent rect. 16 15
54 136.58 radiation 20 1440 < th dose independent rect. 16 7
55 136.60 radiation 20 1440 < th dose independent rect. 16 2
58 136.64 radiation 20 1440 < th dose independent rect. 16 4
65 136.72 radiation 30 4320 < th dose independent rect. 2 6
70 136.77 radiation 20 1440 < th dose independent rect. 16 11
76 136.88 radiation 20 1440 < th dose independent rect. 16 13
92 137.08 radiation 30 4320 < th dose independent rect. 22 10
96 137.19 radiation 30 4320 < th dose independent rect. 19 13
111 137.62 radiation 20 1440 < th dose independent rect. 15 17
122 137.99 radiation 20 1440 < th dose independent sin 13 NA
124 138.03 temperature 20 720 < th dose independent sin 7 NA
125 138.03 radiation 1 1440 > th dose dependent rect. 16 1
130 138.16 radiation 20 1440 < th dose dependent rect. 11 1
138 138.35 radiation 1 1440 > th dose dependent rect. 11 1
140 138.37 humidity 70 720 > th dose independent rect. 18 8
141 138.38 radiation 40 1440 < th dose dependent rect. 11 1
155 138.50 radiation 20 1440 < th dose dependent rect. 11 22
158 138.51 radiation 10 1440 > th dose dependent rect. 16 15
163 138.57 radiation 40 1440 < th dose dependent rect. 16 1
166 138.61 temperature 20 720 < th dose independent rect. 24 14
167 138.62 temperature 20 720 > th dose independent rect. 1 6
178 138.71 temperature 25 720 < th dose dependent rect. 4 5
179 138.72 humidity 90 720 < th dose independent rect. 21 2
180 138.72 temperature 20 720 > th dose independent rect. 3 3
182 138.73 radiation 20 1440 < th dose dependent rect. 16 1
183 138.74 temperature 25 720 > th dose independent rect. 15 11
184 138.74 radiation 20 1440 < th dose independent rect. 11 22
196 138.87 temperature 25 720 < th dose independent rect. 21 1
206 138.95 radiation 20 4320 > th dose dependent rect. 7 1
213 139.04 radiation 1 1440 > th dose dependent rect. 15 21
230 139.11 radiation 20 1440 < th dose independent rect. 15 21
254 139.23 temperature 25 720 > th dose independent rect. 17 8
267 139.31 temperature 20 720 > th dose dependent rect. 3 8
272 139.34 radiation 20 1440 < th dose dependent rect. 15 23
294 139.46 radiation 20 1440 < th dose independent rect. 11 1
300 139.47 radiation 40 1440 < th dose dependent rect. 15 21
305 139.49 radiation 10 1440 < th dose dependent rect. 6 12
312 139.52 radiation 20 4320 > th dose independent rect. 7 1
316 139.55 radiation 30 1440 < th dose dependent rect. 15 17
349 139.67 radiation 10 1440 < th dose dependent sin 23 NA
354 139.69 temperature 20 720 > th dose independent rect. 3 1
355 139.69 radiation 10 1440 < th dose independent rect. 11 7
366 139.72 radiation 10 1440 < th dose independent rect. 13 4
380 139.76 radiation 10 1440 < th dose dependent rect. 6 17
383 139.77 humidity 70 720 > th dose independent rect. 16 12
390 139.77 radiation 10 1440 < th dose dependent rect. 6 21
392 139.78 radiation 10 1440 < th dose independent sin 18 NA
395 139.78 radiation 20 1440 < th dose independent rect. 13 20
397 139.78 radiation 10 1440 < th dose dependent rect. 6 15
407 139.81 temperature 25 720 < th dose independent sin 13 NA
416 139.82 radiation 10 1440 < th dose dependent rect. 2 16
417 139.82 radiation 10 1440 < th dose dependent rect. 20 22
424 139.83 radiation 10 1440 < th dose dependent rect. 22 20
475 139.90 radiation 10 1440 < th dose independent rect. 11 12
477 139.90 radiation 20 1440 < th dose dependent rect. 2 21
486 139.91 radiation 10 1440 < th dose independent rect. 11 16
491 139.91 radiation 20 1440 < th dose dependent rect. 2 19
512 139.93 radiation 20 1440 < th dose dependent no NA NA
530 139.94 temperature 25 720 > th dose independent sin 15 NA
586 139.98 radiation 20 1440 < th dose dependent sin 13 NA
595 139.99 temperature 10 720 > th dose dependent rect. 17 8
629 140.08 radiation 1 1440 > th dose dependent sin 12 NA
739 140.23 temperature 20 720 > th dose independent rect. 1 12
762 140.27 temperature 20 720 > th dose independent rect. 1 10
787 140.31 temperature 20 720 > th dose dependent rect. 1 12
848 140.42 radiation 20 1440 < th dose independent rect. 6 17
849 140.42 radiation 20 1440 < th dose independent rect. 4 19
851 140.42 radiation 20 1440 < th dose independent rect. 2 21
854 140.43 radiation 20 1440 < th dose independent rect. 4 15
862 140.43 radiation 20 1440 < th dose independent rect. 2 19
867 140.43 radiation 20 1440 < th dose independent rect. 6 21
870 140.43 radiation 20 1440 < th dose independent rect. 4 23
874 140.44 radiation 20 1440 < th dose independent rect. 6 12
882 140.44 radiation 20 1440 < th dose independent rect. 2 16
900 140.45 radiation 20 1440 < th dose independent no NA NA
914 140.45 radiation 20 1440 < th dose independent rect. 22 20
962 140.53 humidity 50 720 > th dose dependent rect. 18 8