BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0533800 Os12g0533800|AK071593
(198 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0533800 Mitochondrial substrate carrier family protein 380 e-106
Os11g0707800 Uncoupling protein 115 1e-26
Os09g0465400 Mitochondrial substrate carrier family protein 71 4e-13
Os11g0432400 Similar to 2-oxoglutarate/malate translocator 69 3e-12
Os01g0964900 Similar to Mitochondrial carrier protein-like 67 6e-12
Os05g0208000 Similar to 2-oxoglutarate/malate translocator 66 2e-11
Os06g0604500 Mitochondrial substrate carrier family protein 64 5e-11
AK119402 64 5e-11
Os03g0292200 Mitochondrial substrate carrier family protein 64 1e-10
>Os12g0533800 Mitochondrial substrate carrier family protein
Length = 198
Score = 380 bits (977), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/198 (94%), Positives = 188/198 (94%)
Query: 1 MQPGHGGALYHFGTSGXXXXXXXXXXHPLDVIKVRLQMQLAGQRGNLVGMGTIFTQMVQV 60
MQPGHGGALYHFGTSG HPLDVIKVRLQMQLAGQRGNLVGMGTIFTQMVQV
Sbjct: 1 MQPGHGGALYHFGTSGAAVAAATAVTHPLDVIKVRLQMQLAGQRGNLVGMGTIFTQMVQV 60
Query: 61 EGPRSLYLGLAPALTRSVIYGGLRLGLYEPCKYVCNYAFGSTNFAFKFASGVIAGALATA 120
EGPRSLYLGLAPALTRSVIYGGLRLGLYEPCKYVCNYAFGSTNFAFKFASGVIAGALATA
Sbjct: 61 EGPRSLYLGLAPALTRSVIYGGLRLGLYEPCKYVCNYAFGSTNFAFKFASGVIAGALATA 120
Query: 121 LTNPTEVLKVRSQMSPSRTSTIGVLKKIVAEEGVKALWKGVGPAMARAGCLTASQMATYD 180
LTNPTEVLKVRSQMSPSRTSTIGVLKKIVAEEGVKALWKGVGPAMARAGCLTASQMATYD
Sbjct: 121 LTNPTEVLKVRSQMSPSRTSTIGVLKKIVAEEGVKALWKGVGPAMARAGCLTASQMATYD 180
Query: 181 EAKQALLKWTPLEEGRVA 198
EAKQALLKWTPLEEGRVA
Sbjct: 181 EAKQALLKWTPLEEGRVA 198
>Os11g0707800 Uncoupling protein
Length = 301
Score = 115 bits (289), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 100/183 (54%), Gaps = 13/183 (7%)
Query: 28 PLDVIKVRLQMQ---LAGQRGNLVGMGTIFTQMVQVEGPRSLYLGLAPALTRSVIYGGLR 84
PLD KVRLQ+Q A G+ + + EG +L+ G+ P L R IYGGLR
Sbjct: 32 PLDTAKVRLQLQKNVAADAAPKYRGLLGTAATIAREEGAAALWKGIVPGLHRQCIYGGLR 91
Query: 85 LGLYEPCK--YVCNYAFGSTNFAFKFASGVIAGALATALTNPTEVLKVRSQM-------S 135
+GLYEP K YV G K A+G GA+A ++ NPT+++KVR Q +
Sbjct: 92 IGLYEPVKSFYVGKDHVGDVPLTKKIAAGFTTGAIAISIANPTDLVKVRLQAEGKLAPGA 151
Query: 136 PSRTS-TIGVLKKIVAEEGVKALWKGVGPAMARAGCLTASQMATYDEAKQALLKWTPLEE 194
P R + + KIV +EG ALW G+GP +AR + A+++A+YD+ KQ +LK ++
Sbjct: 152 PRRYAGAMDAYAKIVRQEGFAALWTGIGPNVARNAIINAAELASYDQVKQTILKLPGFKD 211
Query: 195 GRV 197
V
Sbjct: 212 DVV 214
>Os09g0465400 Mitochondrial substrate carrier family protein
Length = 321
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 36/197 (18%)
Query: 27 HPLDVIKVRLQMQLAGQRGNLV------------------------GMGTIFTQMVQVEG 62
HPLD+IKVR+Q+ G + G + Q+++ EG
Sbjct: 21 HPLDLIKVRMQLHGEGPPAPALAFPGGGAHHHHHHHLLQQQPPRRPGPIAVCAQILRAEG 80
Query: 63 PRSLYLGLAPALTRSVIYGGLRLGLYEPCKYVCNYAFGSTNFAF----KFASGVIAGALA 118
P L G++ + R +Y +GLY+ K G K A+G+ +G +
Sbjct: 81 PTGLLSGVSATMLRQTLYSTTCMGLYDTLKRRWERDDGGGGGPLPLHRKVAAGLFSGGVG 140
Query: 119 TALTNPTEVLKVRSQMS--------PSRTSTIGVLKKIVAEEGVKALWKGVGPAMARAGC 170
A+ NP +V VR Q + S + ++ +EGV +LW+G + RA
Sbjct: 141 AAVGNPADVAMVRMQADGRLPAAQRRNYRSVADAIVRMARDEGVCSLWRGSPLTVKRAMI 200
Query: 171 LTASQMATYDEAKQALL 187
+ ASQ+ATYD+AK+A+L
Sbjct: 201 VAASQLATYDQAKEAIL 217
>Os11g0432400 Similar to 2-oxoglutarate/malate translocator
Length = 309
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 23/184 (12%)
Query: 12 FGTSGXXXXXXXXXXHPLDVIKVRLQMQLAGQRGNLVGMGTIFTQMVQVEGPRSLYLGLA 71
F G P+D++KVR+Q+ ++ +M+ EG + Y GL+
Sbjct: 29 FANGGASGMLATCVIQPIDMVKVRIQLGEGSA-------ASVTKKMLANEGISAFYKGLS 81
Query: 72 PALTRSVIYGGLRLGLYEPCKYVCNYAFGSTN-----FAFKFASGVIAGALATALTNPTE 126
L R Y RLG + + + N A + + K G+ AGA+ + +P +
Sbjct: 82 AGLLRQATYTTARLGSF---RVLTNKAVEANDGKPLPLVQKAGIGLTAGAIGACVGSPAD 138
Query: 127 VLKVRSQ--------MSPSRTSTIGVLKKIVAEEGVKALWKGVGPAMARAGCLTASQMAT 178
+ +R Q S + + L +I A+EGV ALWKG GP + RA L +A+
Sbjct: 139 LALIRMQADSTLPAAQSRNYKNAFHALYRIAADEGVLALWKGAGPTVVRAMSLNMGMLAS 198
Query: 179 YDEA 182
YD++
Sbjct: 199 YDQS 202
>Os01g0964900 Similar to Mitochondrial carrier protein-like
Length = 360
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 28 PLDVIKVRLQMQLAGQRGNLVGMGTIFTQMVQVEGPRSLYLGLAPALTRSVIYGGLRLGL 87
P ++I RLQ A R + Q++Q +G LY G A L R++ G L
Sbjct: 179 PKELITQRLQSGAAKGRS-----WQVLLQILQTDGFFGLYAGYAATLLRNLPAGVLS--- 230
Query: 88 YEPCKYVCNYAFGSTNFAF-----KFASGVIAGALATALTNPTEVLKVRSQM----SPSR 138
Y +Y+ + N G +AGA++ ALT P +V+K R SR
Sbjct: 231 YSSFEYLKAFTLKQRNKESLTPGESVLCGALAGAISAALTTPLDVVKTRLMTRVGTEGSR 290
Query: 139 TSTIGVLKKIVAEEGVKALWKGVGPAMARAGCLTASQMATYDEAKQALLKW 189
T +G ++++VAEEG+ L +G+GP + + C A ++ A+ A+LKW
Sbjct: 291 T-VVGTMREVVAEEGLMGLSRGIGPRVLHSACFAALGYCAFETARLAILKW 340
>Os05g0208000 Similar to 2-oxoglutarate/malate translocator
Length = 306
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 29/172 (16%)
Query: 27 HPLDVIKVRLQMQLAGQRGNLVGMGT---IFTQMVQVEGPRSLYLGLAPALTRSVIYGGL 83
P+D++KV++Q+ G G+ + M+ EG S Y GL+ L R Y
Sbjct: 41 QPIDMVKVKIQL----------GEGSAAQVTKNMLANEGIGSFYKGLSAGLLRQATYTTA 90
Query: 84 RLGLYEPCKYVCNYAFGSTN-----FAFKFASGVIAGALATALTNPTEVLKVRSQMSPS- 137
RLG + + + N A + K G+ AGA+ + +P ++ +R Q +
Sbjct: 91 RLGSF---RVLTNKAIEKNDGKPLPLVQKAFIGLTAGAIGACVGSPADLALIRMQADSTL 147
Query: 138 -------RTSTIGVLKKIVAEEGVKALWKGVGPAMARAGCLTASQMATYDEA 182
+ L +I+A+EGV ALWKG GP + RA L +A+YD++
Sbjct: 148 PIAQRRNYKNAFHALYRIIADEGVLALWKGAGPTVVRAMALNMGMLASYDQS 199
>Os06g0604500 Mitochondrial substrate carrier family protein
Length = 515
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 9/168 (5%)
Query: 27 HPLDVIKVRLQMQLAGQRGNLVGMGTIFTQMVQVEGPRSLYLGLAPALTRSVIYGGLRLG 86
+P+D++K RLQ + G + +G + ++ EGPR+ Y GL P+L V Y G+ L
Sbjct: 346 YPVDLVKTRLQT-YSCVDGKVPSLGALSRDILMHEGPRAFYRGLVPSLLGIVPYAGIDLA 404
Query: 87 LYEPCKYVCN-YAFGSTNFA--FKFASGVIAGALATALTNPTEVLKVRSQMSPSRTSTI- 142
+YE K V Y ++ + G ++GAL P +V++ R Q + + +
Sbjct: 405 VYETLKDVSKTYILKDSDPGPLVQLGCGTVSGALGATCVYPLQVIRTRLQAQRANSESAY 464
Query: 143 ----GVLKKIVAEEGVKALWKGVGPAMARAGCLTASQMATYDEAKQAL 186
V + + EGV +KG+ P + + + Y+ K+ L
Sbjct: 465 RGMSDVFWRTLQHEGVSGFYKGILPNLLKVVPAASITYLVYEAMKKNL 512
>AK119402
Length = 357
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 10/169 (5%)
Query: 28 PLDVIKVRLQMQLAGQRGNLVGMGTIFTQMVQVEGPRSLYLGLAPALTRSVIYGGLRLGL 87
PLD++K R+Q+ +G G F+ ++ +G R L G AP L + G + G
Sbjct: 80 PLDLVKCRMQVDPQKYKGIFNG----FSITLKEDGVRGLAKGWAPTLIGYSMQGLCKFGF 135
Query: 88 YEPCKYVCNYAFGSTNF-----AFKFASGVIAGALATALTNPTEVLKVRSQMSPSRTSTI 142
YE K + + G N + AS A A P E KVR Q P +T+
Sbjct: 136 YEVFKALYSNILGEENTYLWRTSLYLASSASAEFFADIALAPMEAAKVRIQTQPGYANTL 195
Query: 143 -GVLKKIVAEEGVKALWKGVGPAMARAGCLTASQMATYDEAKQALLKWT 190
+ K+ EEG+ A +KGV P R T + A ++ +AL K+
Sbjct: 196 REAVPKMYKEEGLNAFYKGVAPLWMRQIPYTMMKFACFERTVEALYKFV 244
>Os03g0292200 Mitochondrial substrate carrier family protein
Length = 317
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 78/175 (44%), Gaps = 20/175 (11%)
Query: 27 HPLDVIKVRLQMQLAGQRGNLVGMGTIFTQMVQVEGPRSLYLGLAPALTRSVIYGGLRLG 86
P+DVIK RLQ+ +G + GT +V+ EG R+L+ GL P T + LRLG
Sbjct: 42 QPIDVIKTRLQLDRSGAYRGIAHCGTT---VVRSEGVRALWKGLTPFATHLTLKYALRLG 98
Query: 87 LYEPCKYVCNYAF-----GSTNFAFKFASGVIAGAL-ATALTNPTEVLKVRSQ----MSP 136
V AF G + + ASG AG L A + P EV+K+R Q +SP
Sbjct: 99 ----SNAVLQSAFKDPGTGKVSAHGRLASGFGAGVLEALLIVTPFEVVKIRLQQQKGLSP 154
Query: 137 S---RTSTIGVLKKIVAEEGVKALWKGVGPAMARAGCLTASQMATYDEAKQALLK 188
I + IV EEG+ LW G P + R G A+ + L K
Sbjct: 155 DLLRYKGPIHCARTIVTEEGLFGLWAGALPTVMRNGTNQAAMFTAKNTFDIVLWK 209
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.135 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,128,250
Number of extensions: 212964
Number of successful extensions: 751
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 761
Number of HSP's successfully gapped: 16
Length of query: 198
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 102
Effective length of database: 12,023,257
Effective search space: 1226372214
Effective search space used: 1226372214
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 153 (63.5 bits)