Os09g0465400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial substrate carrier family protein.
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Os09g0465400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochondrial substrate carrier family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 194.51 | 0.655 | 8.51 | 0.48 | 2.86 | -2.1 | 1.35 | -2.45 | -0.083 | 6.88 | 21.6 | 1364 | -- | -- |
| 202.51 | 0.663 | 8.43 | 1.01 | 2.86 | -1.83 | 1.33 | -- | 0.0836 | 6.87 | 22.1 | 1355 | -- | -- |
| 199.17 | 0.657 | 8.51 | 0.474 | 2.87 | -2.1 | -- | -2.46 | -0.0774 | 6.85 | 21.6 | 1360 | -- | -- |
| 207.3 | 0.671 | 8.43 | 1.03 | 2.87 | -1.84 | -- | -- | 0.0856 | 6.81 | 22.1 | 1350 | -- | -- |
| 559.53 | 1.1 | 8.55 | 0.541 | -- | -2.06 | -- | -1.89 | 0.0363 | -- | 21.8 | 688 | -- | -- |
| 321.55 | 0.841 | 8.56 | 0.33 | 2.83 | -- | 1.41 | -- | -0.503 | 7.01 | -- | -- | -- | -- |
| 326.69 | 0.846 | 8.56 | 0.356 | 2.83 | -- | -- | -- | -0.507 | 6.96 | -- | -- | -- | -- |
| 386.81 | 0.916 | 8.44 | 1.07 | -- | -2.39 | -- | -- | 0.376 | -- | 25.7 | 388 | -- | -- |
| 230.7 | 0.707 | 8.46 | -- | 2.89 | -1.53 | -- | -- | -0.0661 | 6.71 | 22.3 | 1233 | -- | -- |
| 748.42 | 1.28 | 8.63 | 0.414 | -- | -- | -- | -- | -0.454 | -- | -- | -- | -- | -- |
| 330.02 | 0.85 | 8.57 | -- | 2.84 | -- | -- | -- | -0.546 | 6.95 | -- | -- | -- | -- |
| 413.33 | 0.947 | 8.49 | -- | -- | -2.31 | -- | -- | 0.128 | -- | 26.2 | 396 | -- | -- |
| 752.94 | 1.28 | 8.64 | -- | -- | -- | -- | -- | -0.5 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 197.47 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 2 | 198.95 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 22 |
| 17 | 203.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 19 | 203.97 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 30 | 204.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 8 |
| 41 | 204.94 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 43 | 204.97 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 48 | 205.14 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 121 | 206.57 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 219 | 207.98 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 224 | 208.06 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 376 | 209.88 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 400 | 210.12 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 409 | 210.21 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 433 | 210.52 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 23 |
| 440 | 210.62 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 445 | 210.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 479 | 211.02 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 18 |
| 480 | 211.03 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 535 | 211.87 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 17 |
| 654 | 213.25 | temperature | 10 | 720 | > th | dose dependent | sin | 5 | NA |
| 655 | 213.25 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 851 | 215.29 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 865 | 215.46 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 879 | 215.53 | temperature | 15 | 1440 | > th | dose dependent | sin | 10 | NA |
| 891 | 215.62 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 908 | 215.77 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 945 | 216.10 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 981 | 216.41 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |