BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0465400 Os09g0465400|Os09g0465400
(321 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0465400 Mitochondrial substrate carrier family protein 506 e-143
Os11g0432400 Similar to 2-oxoglutarate/malate translocator 166 2e-41
Os05g0208000 Similar to 2-oxoglutarate/malate translocator 164 8e-41
Os11g0707800 Uncoupling protein 160 2e-39
Os08g0478700 Similar to Mitochondrial uncoupling protein (F... 103 2e-22
AK107228 82 6e-16
AK109916 77 2e-14
Os01g0225000 Mitochondrial substrate carrier family protein 70 2e-12
Os12g0533800 Mitochondrial substrate carrier family protein 70 3e-12
>Os09g0465400 Mitochondrial substrate carrier family protein
Length = 321
Score = 506 bits (1302), Expect = e-143, Method: Compositional matrix adjust.
Identities = 262/321 (81%), Positives = 262/321 (81%)
Query: 1 MGLKGFVEGGAACVVAGSCTHPLDLIKVRMQLHGEXXXXXXXXXXXXXXXXXXXXXXXXX 60
MGLKGFVEGGAACVVAGSCTHPLDLIKVRMQLHGE
Sbjct: 1 MGLKGFVEGGAACVVAGSCTHPLDLIKVRMQLHGEGPPAPALAFPGGGAHHHHHHHLLQQ 60
Query: 61 XXXXXXXXIAVCAQILRAEGPTGLLSGVSATMLRQTLYSTTCMGLYDTLKRRWERXXXXX 120
IAVCAQILRAEGPTGLLSGVSATMLRQTLYSTTCMGLYDTLKRRWER
Sbjct: 61 QPPRRPGPIAVCAQILRAEGPTGLLSGVSATMLRQTLYSTTCMGLYDTLKRRWERDDGGG 120
Query: 121 XXXXXXHRKVAAGLFSGGVGAAVGNPADVAMVRMQADGRLPAAQRRNYRSVADAIVRMAR 180
HRKVAAGLFSGGVGAAVGNPADVAMVRMQADGRLPAAQRRNYRSVADAIVRMAR
Sbjct: 121 GGPLPLHRKVAAGLFSGGVGAAVGNPADVAMVRMQADGRLPAAQRRNYRSVADAIVRMAR 180
Query: 181 DEGVCSLWRGSPLTVKRAMIVAASQLATYDQAKEAILARRGQGADGLATHXXXXXXXXXX 240
DEGVCSLWRGSPLTVKRAMIVAASQLATYDQAKEAILARRGQGADGLATH
Sbjct: 181 DEGVCSLWRGSPLTVKRAMIVAASQLATYDQAKEAILARRGQGADGLATHVAAGLAAGLV 240
Query: 241 XXXXXTPVDVVKTRVMNMKVVAGAPPPYSGALDCLIKTVRSEGAMALYKGFVPTVTRQGP 300
TPVDVVKTRVMNMKVVAGAPPPYSGALDCLIKTVRSEGAMALYKGFVPTVTRQGP
Sbjct: 241 AASASTPVDVVKTRVMNMKVVAGAPPPYSGALDCLIKTVRSEGAMALYKGFVPTVTRQGP 300
Query: 301 FTIVLFVTLEQVRKLLKGVDF 321
FTIVLFVTLEQVRKLLKGVDF
Sbjct: 301 FTIVLFVTLEQVRKLLKGVDF 321
>Os11g0432400 Similar to 2-oxoglutarate/malate translocator
Length = 309
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 157/315 (49%), Gaps = 35/315 (11%)
Query: 3 LKGFVEGGAACVVAGSCTHPLDLIKVRMQLHGEXXXXXXXXXXXXXXXXXXXXXXXXXXX 62
+K F GGA+ ++A P+D++KVR+QL GE
Sbjct: 26 VKPFANGGASGMLATCVIQPIDMVKVRIQL-GEGSAA----------------------- 61
Query: 63 XXXXXXIAVCAQILRAEGPTGLLSGVSATMLRQTLYSTTCMGLYDTLKRRWERXXXXXXX 122
+V ++L EG + G+SA +LRQ Y+T +G + L +
Sbjct: 62 -------SVTKKMLANEGISAFYKGLSAGLLRQATYTTARLGSFRVLTNKAVEANDGKPL 114
Query: 123 XXXXHRKVAAGLFSGGVGAAVGNPADVAMVRMQADGRLPAAQRRNYRSVADAIVRMARDE 182
+K GL +G +GA VG+PAD+A++RMQAD LPAAQ RNY++ A+ R+A DE
Sbjct: 115 PLV--QKAGIGLTAGAIGACVGSPADLALIRMQADSTLPAAQSRNYKNAFHALYRIAADE 172
Query: 183 GVCSLWRGSPLTVKRAMIVAASQLATYDQAKEAILARRGQGADGLATHXXXXXXXXXXXX 242
GV +LW+G+ TV RAM + LA+YDQ+ E L R GA + T
Sbjct: 173 GVLALWKGAGPTVVRAMSLNMGMLASYDQSVE--LFRDTLGAGEVTTVLGASAVSGLCAS 230
Query: 243 XXXTPVDVVKTRVMNMKVVAGAPPPYSGALDCLIKTVRSEGAMALYKGFVPTVTRQGPFT 302
P D VKT++ M+ A PY+G+LDC +KT++S G Y GF R P
Sbjct: 231 ACSLPFDYVKTQIQKMQPDASGKYPYTGSLDCAMKTLKSGGPFKFYTGFPVYCVRIAPHA 290
Query: 303 IVLFVTLEQVRKLLK 317
++ ++ L +++KL K
Sbjct: 291 MMTWIFLNEIQKLEK 305
>Os05g0208000 Similar to 2-oxoglutarate/malate translocator
Length = 306
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 154/317 (48%), Gaps = 35/317 (11%)
Query: 3 LKGFVEGGAACVVAGSCTHPLDLIKVRMQLHGEXXXXXXXXXXXXXXXXXXXXXXXXXXX 62
+K FV GGA+ ++A P+D++KV++QL GE
Sbjct: 23 VKPFVNGGASGMLATCVIQPIDMVKVKIQL-GEGSAAQ---------------------- 59
Query: 63 XXXXXXIAVCAQILRAEGPTGLLSGVSATMLRQTLYSTTCMGLYDTLKRRWERXXXXXXX 122
V +L EG G+SA +LRQ Y+T +G + L +
Sbjct: 60 --------VTKNMLANEGIGSFYKGLSAGLLRQATYTTARLGSFRVLTNK--AIEKNDGK 109
Query: 123 XXXXHRKVAAGLFSGGVGAAVGNPADVAMVRMQADGRLPAAQRRNYRSVADAIVRMARDE 182
+K GL +G +GA VG+PAD+A++RMQAD LP AQRRNY++ A+ R+ DE
Sbjct: 110 PLPLVQKAFIGLTAGAIGACVGSPADLALIRMQADSTLPIAQRRNYKNAFHALYRIIADE 169
Query: 183 GVCSLWRGSPLTVKRAMIVAASQLATYDQAKEAILARRGQGADGLATHXXXXXXXXXXXX 242
GV +LW+G+ TV RAM + LA+YDQ+ E L R GA ++T
Sbjct: 170 GVLALWKGAGPTVVRAMALNMGMLASYDQSVE--LFRDKLGAGEVSTVLGASAVSGFFAS 227
Query: 243 XXXTPVDVVKTRVMNMKVVAGAPPPYSGALDCLIKTVRSEGAMALYKGFVPTVTRQGPFT 302
P D VKT++ M+ A PY+G+LDC +KT +S G Y GF R P
Sbjct: 228 ACSLPFDYVKTQIQKMQPDASGKYPYTGSLDCAMKTFKSGGPFKFYTGFPVYCVRIAPHV 287
Query: 303 IVLFVTLEQVRKLLKGV 319
++ ++ L Q++K K +
Sbjct: 288 MMTWIFLNQIQKFEKQI 304
>Os11g0707800 Uncoupling protein
Length = 301
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 143/311 (45%), Gaps = 31/311 (9%)
Query: 6 FVEGGAACVVAGSCTHPLDLIKVRMQLHGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 65
F A A CT PLD KVR+QL
Sbjct: 16 FTASAIAACFAEVCTIPLDTAKVRLQLQKNVAADAAPKYRGL------------------ 57
Query: 66 XXXIAVCAQILRAEGPTGLLSGVSATMLRQTLYSTTCMGLYDTLKRRWERXXXXXXXXXX 125
+ A I R EG L G+ + RQ +Y +GLY+ +K +
Sbjct: 58 ---LGTAATIAREEGAAALWKGIVPGLHRQCIYGGLRIGLYEPVKSFY--VGKDHVGDVP 112
Query: 126 XHRKVAAGLFSGGVGAAVGNPADVAMVRMQADGRLPAAQRRNYRSVADAIVRMARDEGVC 185
+K+AAG +G + ++ NP D+ VR+QA+G+L R Y DA ++ R EG
Sbjct: 113 LTKKIAAGFTTGAIAISIANPTDLVKVRLQAEGKLAPGAPRRYAGAMDAYAKIVRQEGFA 172
Query: 186 SLWRGSPLTVKRAMIVAASQLATYDQAKEAILARRGQGADGLATHXXXXXXXXXXXXXXX 245
+LW G V R I+ A++LA+YDQ K+ IL G D + TH
Sbjct: 173 ALWTGIGPNVARNAIINAAELASYDQVKQTILKLPGF-KDDVVTHLLSGLGAGFFAVCVG 231
Query: 246 TPVDVVKTRVMNMKVVAGAPPPYSGALDCLIKTVRSEGAMALYKGFVPTVTRQGPFTIVL 305
+PVDVVK+R+M Y+ +DC +KT++++G +A YKGF+P R G + +++
Sbjct: 232 SPVDVVKSRMMGDSA-------YTSTIDCFVKTLKNDGPLAFYKGFLPNFARLGSWNVIM 284
Query: 306 FVTLEQVRKLL 316
F+TLEQV+KL
Sbjct: 285 FLTLEQVQKLF 295
>Os08g0478700 Similar to Mitochondrial uncoupling protein (Fragment)
Length = 65
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 45/56 (80%), Positives = 52/56 (92%)
Query: 266 PPYSGALDCLIKTVRSEGAMALYKGFVPTVTRQGPFTIVLFVTLEQVRKLLKGVDF 321
PPYSGA+DC +KTVRSEG MALYKGF+PTV+RQGPFT+VLFVTLEQVRK+ GV+F
Sbjct: 10 PPYSGAIDCALKTVRSEGVMALYKGFIPTVSRQGPFTVVLFVTLEQVRKVFNGVEF 65
>AK107228
Length = 320
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 129/332 (38%), Gaps = 63/332 (18%)
Query: 2 GLKGFVEGGAACVVAGSCTHPLDLIKVRMQLHGEXXXXXXXXXXXXXXXXXXXXXXXXXX 61
G+ GF E AC +C HPLD IKVRMQL
Sbjct: 20 GIAGFAE---AC----TC-HPLDTIKVRMQL----------------------SRRGKKA 49
Query: 62 XXXXXXXIAVCAQILRAEGPTGLLSGVSATMLRQTLYSTTCMGLYDTLKRRWERXXXXXX 121
IA A I++ E P GL G+ A + G+ + R+
Sbjct: 50 GEKPRGFIATGAHIIKRETPLGLYKGLGAVV----------AGIVPKMAIRFMSFEQYKA 99
Query: 122 XXXXXH--RKVAAGLFSGGVGA------AVGNPADVAMVRMQADGRLPAA--QRRNYRSV 171
+ A G+F G+GA AV NP +V +R+QA A + YR+
Sbjct: 100 ALADKDTGKTSARGVFLAGLGAGTTEAVAVVNPMEVVKIRLQAQQHSLADPLEVPRYRNA 159
Query: 172 ADAIVRMARDEGVCSLWRGSPLTVKRAMIVAASQLATYDQAKEAILARRGQGADGLATHX 231
A A+ + R+EG +L+RG LT R A+ Y + K LA+R G L ++
Sbjct: 160 AHALYTIIREEGFMTLYRGVALTAARQATNQAANFTAYQELKG--LAQRVHGTSELPSYE 217
Query: 232 XXXXXXXXXXX--XXXTPVDVVKTRVMNMKVVAGAPPPYSGALDCLIKTVRS----EGAM 285
P+D +KTR+ V G A+ ++K + EGA
Sbjct: 218 TALIGLISGALGPFSNAPIDTIKTRIQRASKVEG-----ETAVSRVVKVAKDMFAQEGAS 272
Query: 286 ALYKGFVPTVTRQGPFTIVLFVTLEQVRKLLK 317
A +KG P V R P V+F E+V+ ++
Sbjct: 273 AFWKGITPRVARVAPGQAVVFTIYEKVKSYIE 304
>AK109916
Length = 371
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 121/327 (37%), Gaps = 20/327 (6%)
Query: 4 KGFVEGGAACVVAGSCTHPLDLIKVRMQLHGEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 63
+GF+ G A + A + T+P+++ K RMQL GE
Sbjct: 21 EGFLCGALAAMTAVTVTNPMEVCKTRMQLQGELMSAAPRVLSGQAGSAAPQAGAQAAVGA 80
Query: 64 XXXXXIAVC-AQILRAEGPTGLLSGVSATMLRQTLYSTTCMGLYDTLKRRWERXXXXXXX 122
C + +++EG G+ G+ A + Q L + + +G Y+ ++ R
Sbjct: 81 RLYKSSLDCFTKTIKSEGLKGVQRGIGAAYVYQVLLNGSRLGFYEPFRKAINRAAGKRPE 140
Query: 123 XXXXHRKVAAGLFSGGVGAAVGNPADVAMVRMQADG--RLPAAQRRNYRSVADAIVRMAR 180
AAG SG VGA +GNP + R+QA + NY+S D +V++ +
Sbjct: 141 EQWAAGAFAAGASSGCVGAILGNPLFLIKARIQAYSPHFVIGKASHNYKSTVDGLVKIVQ 200
Query: 181 DEGVCSLWRGSPLTVKRAMIVAASQLATYDQAKEAI------------LARRGQGADGLA 228
EGV L RG V R + + QL Y+ K + L +
Sbjct: 201 SEGVRGLVRGMDAAVLRTAMGSTVQLPAYNWFKSYLTNMDVEANAYNPLKFLANKPNSFF 260
Query: 229 THXXXXXXXXXXXXXXXTPVDVVKTRVMNMKVVA-----GAPPPYSGALDCLIKTVRSEG 283
T+ P D TR+ N V Y CL T ++EG
Sbjct: 261 TYLASSIFSGLCVCAVMQPADTALTRMYNQPVRVDERGRSVGTLYRNPFHCLYLTAKAEG 320
Query: 284 AMALYKGFVPTVTRQGPFTIVLFVTLE 310
+ YKG + R P T++ V E
Sbjct: 321 VLGWYKGTTAHLFRIAPHTVLTLVMNE 347
>Os01g0225000 Mitochondrial substrate carrier family protein
Length = 322
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 104/250 (41%), Gaps = 17/250 (6%)
Query: 75 ILRAEGPTGLLSGVSATMLRQTLYSTTCMGLYDTLKRRWERXXXXXXXXXXXHRKVA-AG 133
ILRAEGP+ L G+ A + + ++ L R ++ + VA AG
Sbjct: 68 ILRAEGPSALYRGMGAPLASVAFQNAMVFQVFAILSRSIDQPSSMSEPPS--YTSVALAG 125
Query: 134 LFSGGVGAAVGNPADVAMVRMQADGRLPAAQRRNYRSVADAIVRMARD----EGVCSLWR 189
+ +G + + +P ++ +R+Q + A Q+ V MARD EGV ++R
Sbjct: 126 VGTGALQTLILSPVELVKIRLQLEA---AGQKHRRPGDHHGPVDMARDILRKEGVRGIYR 182
Query: 190 GSPLTVKRAMIVAASQLATYDQAKEAILAR-RGQGAD--GLATHXXXXXXXXXXXXXXXT 246
G +T R TY+ A+E + RG G + LAT
Sbjct: 183 GLAVTALRDAPAHGVYFWTYEYARERLHPGCRGHGGEQESLATMLVSGGLAGVASWVCCY 242
Query: 247 PVDVVKTRVMNMKVVAGAPPPYSGALDCLIKTVRSEGAMALYKGFVPTVTRQGPFTIVLF 306
P+DVVK+R+ G PP Y G DC ++VR EG L++G V R +F
Sbjct: 243 PLDVVKSRLQ----AQGYPPRYRGIADCFRRSVREEGLPVLWRGLGTAVARAFVVNGAIF 298
Query: 307 VTLEQVRKLL 316
E + L
Sbjct: 299 SAYELALRFL 308
>Os12g0533800 Mitochondrial substrate carrier family protein
Length = 198
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 86/199 (43%), Gaps = 40/199 (20%)
Query: 21 HPLDLIKVR--MQLHGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAVCAQILRA 78
HPLD+IKVR MQL G+ + Q+++
Sbjct: 27 HPLDVIKVRLQMQLAGQRGNLVGMG--------------------------TIFTQMVQV 60
Query: 79 EGPTGLLSGVSATMLRQTLYSTTCMGLYDTLKRRWERXXXXXXXXXXXHRKVAAGLFSGG 138
EGP L G++ + R +Y +GLY+ K K A+G+ +G
Sbjct: 61 EGPRSLYLGLAPALTRSVIYGGLRLGLYEPCKYVCNYAFGSTNFAF----KFASGVIAGA 116
Query: 139 VGAAVGNPADVAMVRMQADGRLPAAQRRNYRSVADAIVRMARDEGVCSLWRGSPLTVKRA 198
+ A+ NP +V VR Q + S + ++ +EGV +LW+G + RA
Sbjct: 117 LATALTNPTEVLKVRSQMS--------PSRTSTIGVLKKIVAEEGVKALWKGVGPAMARA 168
Query: 199 MIVAASQLATYDQAKEAIL 217
+ ASQ+ATYD+AK+A+L
Sbjct: 169 GCLTASQMATYDEAKQALL 187
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.136 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,625,204
Number of extensions: 277430
Number of successful extensions: 1055
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 1064
Number of HSP's successfully gapped: 10
Length of query: 321
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 220
Effective length of database: 11,762,187
Effective search space: 2587681140
Effective search space used: 2587681140
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 156 (64.7 bits)