Os01g0225000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial substrate carrier family protein.
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Os01g0225000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochondrial substrate carrier family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 581.23 | 1.13 | 9.53 | 4.75 | 2.31 | 1.82 | 2.49 | 3.88 | 0.58 | 2.44 | 1000 | 97 | 3.78 | 15 |
| 626.96 | 1.17 | 9.44 | 4.83 | 2.96 | 2.32 | 1.19 | -- | 0.63 | 2.36 | 1001 | 182 | 3.7 | 14.7 |
| 588.41 | 1.13 | 9.56 | 4.7 | 2.22 | 1.77 | -- | 3.24 | 0.512 | 2.38 | 1001 | 99 | 3.53 | 15.3 |
| 606.63 | 1.15 | 9.51 | 4.8 | 3.09 | 2.43 | -- | -- | 0.53 | 2.31 | 1001 | 190 | 3.57 | 14.9 |
| 730.84 | 1.27 | 9.47 | 4.61 | -- | 0.838 | -- | 3.37 | 0.748 | -- | 1001 | 99 | 3.53 | 15.3 |
| 769.91 | 1.3 | 9.42 | 4.52 | 1.38 | -- | 2.34 | -- | 0.749 | 6.14 | -- | -- | -- | -- |
| 780.81 | 1.31 | 9.43 | 4.54 | 1.41 | -- | -- | -- | 0.738 | 5.6 | -- | -- | -- | -- |
| 802.69 | 1.32 | 9.45 | 4.65 | -- | 0.839 | -- | -- | 0.754 | -- | 1001 | 12 | 3.48 | 15.3 |
| 1209.64 | 1.62 | 9.57 | -- | 3.04 | 2.43 | -- | -- | 0.192 | 2.21 | 1001 | 163 | 3.58 | 15.1 |
| 883.88 | 1.39 | 9.45 | 4.58 | -- | -- | -- | -- | 0.772 | -- | -- | -- | -- | -- |
| 1323.61 | 1.7 | 9.55 | -- | 1.48 | -- | -- | -- | 0.232 | 5.47 | -- | -- | -- | -- |
| 1361.18 | 1.72 | 9.47 | -- | -- | 0.831 | -- | -- | 0.552 | -- | 1003 | 12 | 3.35 | 15.4 |
| 1438.11 | 1.77 | 9.57 | -- | -- | -- | -- | -- | 0.263 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 570.13 | humidity | 80 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 2 | 571.26 | humidity | 80 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 9 | 572.55 | humidity | 80 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 41 | 577.86 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 47 | 579.15 | humidity | 80 | 14400 | > th | dose independent | rect. | 22 | 8 |
| 52 | 581.15 | humidity | 80 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 55 | 581.49 | humidity | 80 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 60 | 582.12 | wind | 9 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 74 | 585.48 | wind | 7 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 78 | 587.61 | humidity | 80 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 86 | 588.08 | humidity | 80 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 107 | 590.79 | wind | 9 | 14400 | > th | dose dependent | rect. | 20 | 19 |
| 127 | 592.55 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 4 | 15 |
| 134 | 593.85 | wind | 9 | 14400 | > th | dose independent | rect. | 20 | 20 |
| 140 | 594.25 | wind | 9 | 14400 | < th | dose independent | rect. | 4 | 11 |
| 160 | 596.44 | wind | 9 | 14400 | < th | dose independent | rect. | 23 | 16 |
| 169 | 596.97 | wind | 9 | 14400 | > th | dose independent | rect. | 4 | 11 |
| 175 | 597.09 | wind | 9 | 14400 | > th | dose independent | rect. | 23 | 16 |
| 199 | 598.24 | wind | 9 | 14400 | > th | dose dependent | rect. | 5 | 10 |
| 200 | 598.36 | wind | 9 | 14400 | > th | dose dependent | rect. | 10 | 5 |
| 201 | 598.37 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 5 |
| 202 | 598.42 | wind | 9 | 14400 | > th | dose dependent | rect. | 23 | 16 |
| 279 | 603.06 | wind | 9 | 14400 | < th | dose independent | rect. | 20 | 20 |
| 390 | 612.82 | wind | 9 | 14400 | > th | dose independent | sin | 2 | NA |
| 394 | 612.99 | wind | 9 | 14400 | > th | dose dependent | sin | 1 | NA |
| 417 | 614.19 | wind | 9 | 14400 | < th | dose independent | sin | 3 | NA |
| 471 | 616.69 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 519 | 619.03 | wind | 1 | 43200 | < th | dose dependent | rect. | 9 | 3 |
| 520 | 619.11 | wind | 7 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 539 | 620.79 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 733 | 628.94 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 769 | 630.26 | wind | 9 | 14400 | > th | dose independent | rect. | 3 | 22 |
| 779 | 630.44 | wind | 9 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 782 | 630.52 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 22 |
| 788 | 630.71 | wind | 9 | 14400 | > th | dose dependent | rect. | 12 | 23 |
| 791 | 630.80 | wind | 9 | 14400 | > th | dose independent | no | NA | NA |
| 799 | 630.95 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 803 | 630.99 | wind | 9 | 14400 | > th | dose independent | rect. | 7 | 23 |
| 846 | 631.89 | wind | 9 | 14400 | > th | dose dependent | rect. | 12 | 20 |
| 873 | 632.47 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 15 |
| 883 | 632.69 | wind | 9 | 14400 | > th | dose dependent | rect. | 10 | 22 |
| 948 | 633.64 | wind | 9 | 14400 | > th | dose dependent | no | NA | NA |
| 971 | 633.97 | wind | 1 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 972 | 634.08 | wind | 9 | 14400 | > th | dose dependent | rect. | 12 | 12 |