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Os11g0432400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to 2-oxoglutarate/malate translocator.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.4 (0.0277) R2 : 0.858
β1 : -2.34 (0.102) R2dD : 0.174 R2D : 0.122
β2 : 3.58 (0.0852) R2dC : 0.781 R2C : 0.54
β3 : -1.23 (0.126) R2dE : 0.0466 R2E : -0.182
β4 : 4.06 (0.329) R2dD*C : 0.0485 R2D*C : 0.0216
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.04 (0.0617) R2dN8 : 0.131 R2N8 : 0.00149
σ : 0.515
deviance : 122.31
__
_____
C
peak time of C : 6.77
E
wheather : humidity
threshold : 90.79
memory length : 302
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
122.18 0.519 13.4 -2.33 3.59 -1.21 4.18 -0.358 -1.04 6.76 90.62 295 -- --
122.31 0.515 13.4 -2.34 3.58 -1.23 4.06 -- -1.04 6.77 90.79 302 -- --
152.89 0.576 13.4 -2.41 3.45 -1.27 -- 3.12 -1.03 6.82 92.84 332 -- --
161.5 0.592 13.4 -2.28 3.58 -0.891 -- -- -1.01 6.69 87.11 294 -- --
447.9 0.986 13.6 -2.45 -- 2.71 -- 4.12 -0.6 -- 63.79 523 -- --
145.48 0.565 13.4 -2.46 3.13 -- 3.57 -- -0.862 7 -- -- -- --
178.47 0.626 13.4 -2.39 3.14 -- -- -- -0.872 6.92 -- -- -- --
411.54 0.945 13.5 -2.34 -- 3.06 -- -- -0.691 -- 60.75 515 -- --
295.1 0.8 13.4 -- 3.7 -1.2 -- -- -0.803 6.66 86.22 300 -- --
695.8 1.23 13.5 -2.33 -- -- -- -- -0.813 -- -- -- -- --
329.57 0.849 13.4 -- 3.11 -- -- -- -0.605 6.96 -- -- -- --
549.02 1.09 13.4 -- -- 3.29 -- -- -0.506 -- 38.24 521 -- --
838.79 1.35 13.4 -- -- -- -- -- -0.554 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 114.40 atmosphere 995.0 270 > th dose dependent rect. 12 8
3 116.62 atmosphere 1000.0 270 > th dose independent rect. 12 8
5 116.94 atmosphere 995.0 270 > th dose independent rect. 14 17
7 117.12 temperature 10.0 270 > th dose dependent rect. 19 8
12 117.62 humidity 90.0 90 < th dose independent rect. 21 17
13 117.78 temperature 25.0 270 > th dose independent rect. 20 9
14 117.79 atmosphere 995.0 270 > th dose independent rect. 13 19
15 117.96 temperature 25.0 270 > th dose independent rect. 12 6
16 117.99 humidity 90.0 270 < th dose independent rect. 19 18
20 118.21 temperature 25.0 270 > th dose independent rect. 20 6
29 118.46 temperature 25.0 270 > th dose independent rect. 14 3
33 118.55 temperature 25.0 270 > th dose dependent rect. 21 5
36 118.62 temperature 25.0 270 > th dose dependent rect. 21 9
54 118.84 atmosphere 1000.0 10 > th dose independent rect. 14 20
60 118.96 atmosphere 1000.0 10 > th dose independent rect. 16 16
67 119.09 atmosphere 995.0 10 > th dose dependent rect. 14 7
72 119.23 atmosphere 995.0 270 > th dose independent rect. 3 15
75 119.28 atmosphere 1000.0 30 > th dose independent rect. 14 18
78 119.44 atmosphere 1000.0 10 > th dose independent rect. 16 18
79 119.44 temperature 15.0 30 > th dose dependent rect. 14 7
81 119.54 atmosphere 995.0 270 > th dose independent rect. 12 21
93 119.75 humidity 90.0 270 < th dose independent rect. 19 7
99 119.86 precipitation 0.1 270 < th dose independent rect. 18 9
100 119.86 precipitation 0.1 270 < th dose dependent rect. 18 9
104 119.90 temperature 10.0 270 > th dose dependent rect. 12 7
135 120.42 humidity 90.0 270 > th dose dependent rect. 12 19
138 120.50 precipitation 0.1 270 < th dose independent rect. 19 17
139 120.50 precipitation 0.1 270 < th dose dependent rect. 19 17
145 120.55 humidity 90.0 270 > th dose dependent rect. 17 14
150 120.60 precipitation 0.1 270 < th dose independent rect. 8 17
151 120.60 precipitation 0.1 270 < th dose dependent rect. 8 17
166 120.72 radiation 40.0 270 < th dose independent rect. 8 6
175 120.78 temperature 20.0 30 > th dose independent rect. 14 7
197 121.00 wind 7.0 270 < th dose independent rect. 12 7
212 121.19 wind 9.0 270 < th dose independent rect. 14 17
221 121.36 temperature 15.0 270 > th dose independent rect. 14 17
223 121.38 temperature 10.0 270 > th dose independent rect. 7 7
224 121.38 atmosphere 995.0 270 > th dose independent rect. 7 7
225 121.38 atmosphere 1015.0 270 < th dose independent rect. 7 7
236 121.46 radiation 1.0 270 > th dose independent rect. 7 7
241 121.47 precipitation 0.1 270 < th dose independent rect. 7 7
243 121.47 precipitation 0.1 270 < th dose dependent rect. 7 7
261 121.64 wind 9.0 270 < th dose independent rect. 7 7
264 121.66 precipitation 0.1 270 < th dose independent rect. 17 21
265 121.66 precipitation 0.1 270 < th dose dependent rect. 17 21
274 121.72 humidity 90.0 270 > th dose dependent rect. 3 23
279 121.78 wind 9.0 270 < th dose independent rect. 13 19
282 121.80 temperature 25.0 270 < th dose independent rect. 23 8
290 121.83 temperature 25.0 270 > th dose independent sin 10 NA
300 121.89 temperature 15.0 270 > th dose independent rect. 13 19
308 121.97 temperature 10.0 270 > th dose independent rect. 8 5
309 121.97 atmosphere 995.0 270 > th dose independent rect. 8 5
310 121.97 atmosphere 1015.0 270 < th dose independent rect. 8 5
314 121.98 precipitation 0.1 270 < th dose independent rect. 8 5
315 121.98 precipitation 0.1 270 < th dose dependent rect. 8 5
321 122.03 wind 1.0 270 > th dose independent rect. 8 17
327 122.06 radiation 1.0 270 > th dose independent rect. 8 5
328 122.06 atmosphere 1015.0 270 < th dose independent rect. 19 17
339 122.14 wind 9.0 270 < th dose independent rect. 8 5
340 122.14 temperature 30.0 270 < th dose dependent rect. 1 6
353 122.19 wind 9.0 270 < th dose independent rect. 3 15
356 122.21 humidity 90.0 10 < th dose independent rect. 21 19
358 122.22 humidity 90.0 270 > th dose dependent rect. 21 10
363 122.25 wind 7.0 270 < th dose independent rect. 18 9
369 122.26 humidity 90.0 270 > th dose dependent rect. 21 23
375 122.29 radiation 40.0 270 < th dose independent rect. 14 17
388 122.38 wind 1.0 270 > th dose independent rect. 19 17
398 122.45 wind 1.0 270 > th dose independent rect. 18 9
406 122.51 atmosphere 1015.0 270 < th dose independent rect. 8 17
411 122.54 atmosphere 1010.0 270 < th dose independent rect. 12 7
425 122.61 atmosphere 995.0 270 > th dose independent rect. 14 3
438 122.66 humidity 50.0 270 > th dose dependent rect. 23 9
439 122.66 humidity 90.0 270 > th dose dependent rect. 17 23
442 122.68 radiation 40.0 270 < th dose independent rect. 19 19
443 122.68 humidity 50.0 270 > th dose dependent rect. 1 7
447 122.69 wind 9.0 270 < th dose independent rect. 19 17
448 122.69 radiation 40.0 270 < th dose independent rect. 8 17
450 122.70 humidity 90.0 270 > th dose dependent no NA NA
453 122.71 temperature 10.0 270 > th dose independent rect. 12 7
457 122.71 temperature 10.0 270 > th dose independent rect. 19 17
458 122.71 atmosphere 995.0 270 > th dose independent rect. 19 17
483 122.84 wind 1.0 270 > th dose independent rect. 8 5
496 122.88 humidity 60.0 270 > th dose independent rect. 18 9
509 122.91 atmosphere 1010.0 270 < th dose independent rect. 1 7
522 122.93 precipitation 0.1 30 < th dose independent rect. 21 17
525 122.93 precipitation 0.1 30 < th dose dependent rect. 21 17
526 122.94 temperature 25.0 720 > th dose independent rect. 21 1
532 122.96 temperature 10.0 270 > th dose independent rect. 18 9
534 122.96 radiation 10.0 270 < th dose independent rect. 18 9
538 122.96 temperature 10.0 270 > th dose independent rect. 3 15
539 122.96 atmosphere 1015.0 270 < th dose independent rect. 3 15
544 122.98 radiation 30.0 270 < th dose dependent rect. 18 9
553 123.02 temperature 10.0 270 > th dose independent rect. 1 7
555 123.02 temperature 30.0 270 < th dose independent rect. 1 7
556 123.02 humidity 50.0 270 > th dose independent rect. 1 7
558 123.02 atmosphere 995.0 270 > th dose independent rect. 1 7
561 123.02 temperature 10.0 270 > th dose independent rect. 8 17
564 123.03 wind 9.0 270 < th dose independent rect. 1 7
565 123.03 wind 9.0 10 < th dose independent rect. 14 7
571 123.05 radiation 40.0 270 < th dose independent rect. 1 7
580 123.06 temperature 30.0 270 < th dose dependent rect. 23 8
597 123.13 humidity 90.0 270 > th dose independent rect. 21 10
628 123.23 humidity 90.0 270 > th dose dependent sin 10 NA
637 123.28 atmosphere 1015.0 30 < th dose independent rect. 21 17
658 123.35 radiation 40.0 270 < th dose dependent rect. 8 17
661 123.37 humidity 90.0 270 > th dose independent rect. 12 19
700 123.49 wind 9.0 10 < th dose independent rect. 16 16
712 123.52 temperature 15.0 10 > th dose independent rect. 16 16
718 123.55 radiation 40.0 30 < th dose independent rect. 14 7
719 123.55 wind 9.0 30 < th dose independent rect. 21 17
724 123.56 humidity 90.0 270 > th dose independent rect. 17 14
726 123.58 humidity 50.0 270 > th dose independent rect. 19 17
727 123.58 radiation 1.0 270 > th dose independent rect. 13 17
731 123.60 temperature 10.0 10 > th dose independent rect. 8 8
733 123.60 atmosphere 1015.0 10 < th dose independent rect. 8 8
734 123.60 precipitation 0.1 10 < th dose independent rect. 8 8
741 123.60 precipitation 0.1 10 < th dose dependent rect. 8 8
746 123.61 radiation 40.0 10 < th dose independent rect. 16 16
747 123.61 wind 9.0 270 < th dose independent rect. 8 17
774 123.71 wind 1.0 270 > th dose independent rect. 12 7
780 123.73 humidity 50.0 270 > th dose independent rect. 8 5
797 123.75 temperature 10.0 1440 > th dose independent rect. 15 7
800 123.75 temperature 10.0 1440 > th dose independent rect. 22 17
808 123.76 precipitation 0.1 270 < th dose independent rect. 12 7
814 123.76 precipitation 0.1 270 < th dose dependent rect. 12 7
818 123.77 temperature 25.0 10 > th dose dependent rect. 16 5
823 123.78 temperature 10.0 30 > th dose independent rect. 14 7
825 123.78 atmosphere 1010.0 30 < th dose independent rect. 14 7
828 123.78 temperature 10.0 30 > th dose independent rect. 21 17
829 123.78 atmosphere 995.0 30 > th dose independent rect. 21 17
830 123.78 temperature 15.0 10 > th dose independent rect. 16 18
844 123.81 wind 9.0 10 < th dose independent rect. 16 18
845 123.82 radiation 1.0 270 > th dose independent rect. 9 3
848 123.82 precipitation 0.1 10 < th dose independent rect. 14 7
850 123.82 precipitation 0.1 10 < th dose dependent rect. 14 7
856 123.83 humidity 50.0 10 > th dose dependent rect. 16 18
859 123.84 temperature 10.0 1440 > th dose independent rect. 9 8
863 123.84 temperature 10.0 1440 > th dose independent rect. 17 16
881 123.86 temperature 10.0 270 > th dose dependent rect. 19 17
882 123.87 temperature 10.0 10 > th dose independent rect. 10 6
884 123.87 atmosphere 1015.0 10 < th dose independent rect. 10 6
885 123.87 precipitation 0.1 10 < th dose independent rect. 10 6
889 123.87 precipitation 0.1 10 < th dose dependent rect. 10 6
892 123.88 temperature 30.0 270 < th dose independent rect. 18 9
909 123.92 wind 9.0 10 < th dose independent rect. 8 8
911 123.92 atmosphere 1015.0 270 < th dose dependent rect. 1 7
921 123.94 radiation 10.0 270 > th dose independent rect. 16 1
937 124.01 wind 1.0 270 > th dose independent rect. 9 3
939 124.02 precipitation 0.1 270 < th dose independent rect. 1 7
943 124.02 precipitation 0.1 270 < th dose dependent rect. 1 7
964 124.08 wind 9.0 10 < th dose independent rect. 10 6
967 124.08 atmosphere 995.0 10 > th dose dependent rect. 16 5
973 124.09 temperature 30.0 270 < th dose dependent rect. 8 7
978 124.12 wind 1.0 270 > th dose independent rect. 17 21
994 124.17 wind 1.0 10 > th dose independent rect. 14 7
995 124.17 atmosphere 1015.0 270 < th dose independent rect. 18 8