Os06g0604500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial substrate carrier family protein.
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Os06g0604500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochondrial substrate carrier family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.52 | 0.264 | 8.66 | -0.102 | 1.73 | -0.29 | -0.0721 | 0.598 | -0.0773 | 8.43 | 20.54 | 205 | -- | -- |
| 33.09 | 0.268 | 8.68 | -0.176 | 1.73 | -0.344 | -0.0443 | -- | -0.0913 | 8.43 | 20.5 | 198 | -- | -- |
| 31.53 | 0.262 | 8.66 | -0.103 | 1.73 | -0.289 | -- | 0.603 | -0.0775 | 8.42 | 20.55 | 210 | -- | -- |
| 33.06 | 0.268 | 8.67 | -0.199 | 1.73 | -0.347 | -- | -- | -0.0929 | 8.46 | 20.6 | 195 | -- | -- |
| 130.37 | 0.532 | 8.61 | 0.127 | -- | -1.17 | -- | 1.17 | 0.282 | -- | 25.8 | 579 | -- | -- |
| 37.2 | 0.286 | 8.69 | -0.31 | 1.73 | -- | -0.0622 | -- | -0.168 | 8.31 | -- | -- | -- | -- |
| 37.21 | 0.286 | 8.69 | -0.311 | 1.73 | -- | -- | -- | -0.168 | 8.31 | -- | -- | -- | -- |
| 131.91 | 0.535 | 8.67 | 0.063 | -- | -1.22 | -- | -- | 0.159 | -- | 26.4 | 616 | -- | -- |
| 34.14 | 0.272 | 8.67 | -- | 1.73 | -0.378 | -- | -- | -0.0652 | 8.46 | 20.5 | 200 | -- | -- |
| 202.42 | 0.665 | 8.73 | -0.3 | -- | -- | -- | -- | -0.149 | -- | -- | -- | -- | -- |
| 39.77 | 0.295 | 8.68 | -- | 1.72 | -- | -- | -- | -0.133 | 8.32 | -- | -- | -- | -- |
| 131.95 | 0.535 | 8.67 | -- | -- | -1.19 | -- | -- | 0.136 | -- | 26.39 | 616 | -- | -- |
| 204.8 | 0.668 | 8.73 | -- | -- | -- | -- | -- | -0.116 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.56 | temperature | 20 | 10 | > th | dose independent | rect. | 16 | 13 |
| 3 | 30.94 | temperature | 20 | 90 | > th | dose independent | rect. | 7 | 22 |
| 4 | 31.01 | temperature | 20 | 90 | > th | dose independent | rect. | 23 | 23 |
| 7 | 31.20 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 22 |
| 14 | 31.41 | radiation | 1 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 17 | 31.46 | temperature | 20 | 10 | > th | dose independent | rect. | 1 | 4 |
| 18 | 31.47 | temperature | 20 | 10 | > th | dose independent | rect. | 8 | 21 |
| 21 | 31.56 | temperature | 20 | 270 | < th | dose independent | sin | 10 | NA |
| 23 | 31.57 | temperature | 20 | 270 | > th | dose independent | rect. | 23 | 3 |
| 30 | 31.65 | temperature | 20 | 270 | < th | dose independent | rect. | 18 | 16 |
| 55 | 31.79 | temperature | 20 | 90 | > th | dose independent | rect. | 23 | 6 |
| 56 | 31.79 | temperature | 20 | 270 | > th | dose independent | rect. | 23 | 11 |
| 65 | 31.82 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 67 | 31.83 | temperature | 20 | 90 | < th | dose independent | rect. | 18 | 22 |
| 68 | 31.83 | temperature | 20 | 270 | > th | dose independent | rect. | 12 | 23 |
| 81 | 31.87 | temperature | 20 | 270 | < th | dose independent | rect. | 10 | 22 |
| 87 | 31.88 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 23 |
| 90 | 31.89 | temperature | 10 | 10 | > th | dose dependent | rect. | 16 | 13 |
| 108 | 31.93 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 117 | 31.95 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 20 |
| 120 | 31.95 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 22 |
| 139 | 31.98 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 157 | 31.99 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 23 |
| 174 | 32.03 | temperature | 20 | 720 | < th | dose independent | sin | 14 | NA |
| 181 | 32.04 | temperature | 20 | 720 | > th | dose independent | rect. | 15 | 11 |
| 214 | 32.06 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 228 | 32.09 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 240 | 32.10 | humidity | 70 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 241 | 32.10 | humidity | 70 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 259 | 32.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 20 |
| 263 | 32.11 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 271 | 32.12 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 272 | 32.12 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 2 |
| 304 | 32.17 | temperature | 20 | 90 | > th | dose independent | no | NA | NA |
| 318 | 32.18 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 8 |
| 321 | 32.19 | temperature | 20 | 720 | < th | dose independent | rect. | 17 | 10 |
| 328 | 32.19 | radiation | 1 | 720 | < th | dose dependent | rect. | 4 | 19 |
| 335 | 32.20 | temperature | 20 | 270 | < th | dose independent | no | NA | NA |
| 337 | 32.20 | atmosphere | 1010 | 10 | < th | dose independent | rect. | 16 | 13 |
| 349 | 32.21 | temperature | 20 | 90 | > th | dose independent | rect. | 15 | 23 |
| 373 | 32.23 | temperature | 25 | 720 | < th | dose dependent | sin | 14 | NA |
| 374 | 32.23 | temperature | 25 | 720 | < th | dose dependent | rect. | 14 | 16 |
| 399 | 32.26 | humidity | 90 | 14400 | > th | dose independent | rect. | 24 | 10 |
| 400 | 32.26 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 12 |
| 410 | 32.26 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 23 |
| 448 | 32.30 | humidity | 90 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 457 | 32.31 | humidity | 90 | 14400 | > th | dose independent | sin | 9 | NA |
| 459 | 32.31 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 10 |
| 495 | 32.32 | temperature | 10 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 536 | 32.35 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 13 |
| 543 | 32.35 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 4 |
| 551 | 32.36 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 554 | 32.36 | temperature | 20 | 10 | > th | dose independent | rect. | 12 | 17 |
| 582 | 32.37 | temperature | 20 | 90 | < th | dose independent | rect. | 3 | 23 |
| 583 | 32.37 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 603 | 32.38 | temperature | 20 | 90 | < th | dose independent | rect. | 1 | 23 |
| 608 | 32.39 | humidity | 90 | 14400 | < th | dose independent | sin | 9 | NA |
| 632 | 32.39 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 636 | 32.40 | temperature | 20 | 270 | > th | dose independent | sin | 9 | NA |
| 689 | 32.43 | wind | 7 | 720 | < th | dose independent | rect. | 20 | 10 |
| 727 | 32.44 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 735 | 32.45 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 4 |
| 775 | 32.46 | temperature | 20 | 270 | < th | dose dependent | sin | 9 | NA |
| 787 | 32.47 | atmosphere | 995 | 10 | > th | dose independent | rect. | 16 | 13 |
| 800 | 32.47 | radiation | 1 | 720 | < th | dose dependent | rect. | 6 | 17 |
| 801 | 32.47 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 20 |
| 802 | 32.47 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 21 |
| 818 | 32.48 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 831 | 32.49 | humidity | 50 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 884 | 32.51 | humidity | 50 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 894 | 32.51 | temperature | 20 | 90 | > th | dose independent | rect. | 12 | 17 |
| 902 | 32.51 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 18 | 14 |
| 912 | 32.52 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 913 | 32.52 | humidity | 50 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 923 | 32.52 | temperature | 20 | 4320 | < th | dose independent | rect. | 14 | 16 |
| 932 | 32.52 | temperature | 20 | 4320 | < th | dose dependent | rect. | 2 | 3 |
| 939 | 32.53 | wind | 7 | 720 | < th | dose independent | rect. | 19 | 4 |
| 942 | 32.53 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 963 | 32.53 | temperature | 20 | 4320 | < th | dose dependent | rect. | 2 | 1 |
| 967 | 32.53 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 18 |
| 971 | 32.54 | temperature | 20 | 4320 | < th | dose independent | sin | 13 | NA |
| 981 | 32.54 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 13 |
| 985 | 32.54 | temperature | 20 | 4320 | > th | dose independent | rect. | 14 | 16 |