BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0442800 Os12g0442800|AK069818
(400 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0442800 Similar to Sulfite oxidase (EC 1.8.3.1) (Moco ... 827 0.0
Os08g0530400 Moco containing protein (Moco containing prote... 588 e-168
Os02g0770800 Similar to Nitrate reductase [NAD(P)H] (EC 1.7... 214 7e-56
Os08g0468100 Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1) 213 2e-55
Os08g0468700 Similar to Nitrate reductase [NADH] 1 (EC 1.7.... 211 7e-55
AK110249 194 1e-49
>Os12g0442800 Similar to Sulfite oxidase (EC 1.8.3.1) (Moco containig protein
AtMCP) (At-SO) (AtSOX)
Length = 400
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/400 (100%), Positives = 400/400 (100%)
Query: 1 MAMRQGALRGPSDYSQEPTRHPSLRINAKEPFNAEATRRDLVASYITPVDLFLKRNHGPI 60
MAMRQGALRGPSDYSQEPTRHPSLRINAKEPFNAEATRRDLVASYITPVDLFLKRNHGPI
Sbjct: 1 MAMRQGALRGPSDYSQEPTRHPSLRINAKEPFNAEATRRDLVASYITPVDLFLKRNHGPI 60
Query: 61 PILHDIDSYYVTVAGLIERPAKLYLNDIKKLPKYNVTATLQCAGNRRTEMSKSRKVRGVG 120
PILHDIDSYYVTVAGLIERPAKLYLNDIKKLPKYNVTATLQCAGNRRTEMSKSRKVRGVG
Sbjct: 61 PILHDIDSYYVTVAGLIERPAKLYLNDIKKLPKYNVTATLQCAGNRRTEMSKSRKVRGVG 120
Query: 121 WDVCALGNATWGGAKLSDVLQLIGVPYHTEITPSGGKHVEFTSVDQCPEEKGGPYKASIS 180
WDVCALGNATWGGAKLSDVLQLIGVPYHTEITPSGGKHVEFTSVDQCPEEKGGPYKASIS
Sbjct: 121 WDVCALGNATWGGAKLSDVLQLIGVPYHTEITPSGGKHVEFTSVDQCPEEKGGPYKASIS 180
Query: 181 LGHATNPAADVLVAYEMNGEVLKRDHGYPLRVVVPGVIGARSVKWLDRIDIIEEECQGFF 240
LGHATNPAADVLVAYEMNGEVLKRDHGYPLRVVVPGVIGARSVKWLDRIDIIEEECQGFF
Sbjct: 181 LGHATNPAADVLVAYEMNGEVLKRDHGYPLRVVVPGVIGARSVKWLDRIDIIEEECQGFF 240
Query: 241 MQKDYKMFPPSVDWDNIVWSTRKPQMDYPVQSAICSLEDTNAIIPGEVTVTGYALSGGGR 300
MQKDYKMFPPSVDWDNIVWSTRKPQMDYPVQSAICSLEDTNAIIPGEVTVTGYALSGGGR
Sbjct: 241 MQKDYKMFPPSVDWDNIVWSTRKPQMDYPVQSAICSLEDTNAIIPGEVTVTGYALSGGGR 300
Query: 301 GIERVDISTDGGKTWFGAVRYQKEGVPYVAGDISSDKWAWVLFKTVIDVKGDTEVIVKAV 360
GIERVDISTDGGKTWFGAVRYQKEGVPYVAGDISSDKWAWVLFKTVIDVKGDTEVIVKAV
Sbjct: 301 GIERVDISTDGGKTWFGAVRYQKEGVPYVAGDISSDKWAWVLFKTVIDVKGDTEVIVKAV 360
Query: 361 DSSANVQPESVETIWNLRGILNTCWHRVRLLTIHNLRSLL 400
DSSANVQPESVETIWNLRGILNTCWHRVRLLTIHNLRSLL
Sbjct: 361 DSSANVQPESVETIWNLRGILNTCWHRVRLLTIHNLRSLL 400
>Os08g0530400 Moco containing protein (Moco containing protein(OsMCP))
Length = 397
Score = 588 bits (1516), Expect = e-168, Method: Compositional matrix adjust.
Identities = 271/383 (70%), Positives = 317/383 (82%)
Query: 8 LRGPSDYSQEPTRHPSLRINAKEPFNAEATRRDLVASYITPVDLFLKRNHGPIPILHDID 67
L P+ YS EP RHP+L+IN+KEPFNAE R LV+SYITPVD F KRNHGPIPI+ D+
Sbjct: 4 LTAPASYSDEPPRHPALKINSKEPFNAEPHRSALVSSYITPVDFFYKRNHGPIPIVDDLS 63
Query: 68 SYYVTVAGLIERPAKLYLNDIKKLPKYNVTATLQCAGNRRTEMSKSRKVRGVGWDVCALG 127
Y V++ G++ + +L + DI+ LPKY+VTATLQCAGNRRT MSK RKVRGVGWD+ ALG
Sbjct: 64 RYSVSITGIVNKNVQLSMADIRSLPKYDVTATLQCAGNRRTAMSKVRKVRGVGWDISALG 123
Query: 128 NATWGGAKLSDVLQLIGVPYHTEITPSGGKHVEFTSVDQCPEEKGGPYKASISLGHATNP 187
NATWGGAKLSDVL+L+G+P + +T GGKHVEF SVD+C EEKGGPYKASI L AT+P
Sbjct: 124 NATWGGAKLSDVLELVGIPKLSSVTSLGGKHVEFVSVDRCKEEKGGPYKASIPLKQATDP 183
Query: 188 AADVLVAYEMNGEVLKRDHGYPLRVVVPGVIGARSVKWLDRIDIIEEECQGFFMQKDYKM 247
ADVL+AYEMNGE L RDHGYPLRVVVPGVIGARSVKWLD I+IIEEECQGFF+QKDYKM
Sbjct: 184 EADVLLAYEMNGETLNRDHGYPLRVVVPGVIGARSVKWLDSINIIEEECQGFFVQKDYKM 243
Query: 248 FPPSVDWDNIVWSTRKPQMDYPVQSAICSLEDTNAIIPGEVTVTGYALSGGGRGIERVDI 307
FPPSVDWDNI WSTR+PQMD+PVQSAIC+LED + I G+ + GYA+SGGGRGIERVDI
Sbjct: 244 FPPSVDWDNINWSTRRPQMDFPVQSAICTLEDVDVIKEGKARIAGYAVSGGGRGIERVDI 303
Query: 308 STDGGKTWFGAVRYQKEGVPYVAGDISSDKWAWVLFKTVIDVKGDTEVIVKAVDSSANVQ 367
S DGGKTW A RYQK VPY++ SDKWAWVLF+ +DV + E++ KAVDS+ANVQ
Sbjct: 304 SVDGGKTWVEAHRYQKSNVPYISDGPRSDKWAWVLFEATLDVPANAEIVAKAVDSAANVQ 363
Query: 368 PESVETIWNLRGILNTCWHRVRL 390
PE VE +WNLRGILNT WHR+++
Sbjct: 364 PEKVEDVWNLRGILNTSWHRIKI 386
>Os02g0770800 Similar to Nitrate reductase [NAD(P)H] (EC 1.7.1.2)
Length = 889
Score = 214 bits (546), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 134/390 (34%), Positives = 200/390 (51%), Gaps = 29/390 (7%)
Query: 20 RHPSL-RINAKEPFNAEATRRDLVA-SYITPVDLFLKRNHGPIPILHDIDSYYVTVAGLI 77
RHP+L R+ K PFN+E L++ +ITP L RNHG +P D ++ V V GL+
Sbjct: 81 RHPALVRLTGKHPFNSEPPLPRLMSHGFITPAPLHYVRNHGAVPKA-DWSTWAVEVTGLV 139
Query: 78 ERPAKLYLND-IKKLPKYNVTATLQCAGNRRTEMSKSRKVRGVGWDVCALGNATWGGAKL 136
+RPA+L + + + TL CAGNRR E + R+ G W A+ + W G +L
Sbjct: 140 KRPARLNMEQLVTGFEAVELPVTLVCAGNRRKEQNMVRQTVGFNWGPGAISTSVWRGVRL 199
Query: 137 SDVLQLIGVPYHTEITPSGGKHVEFTSVDQCPEEKGGPYKASISLGHATNPAADVLVAYE 196
DVL+ GV + +G +V F + P G Y S+ A +PA DV++AY
Sbjct: 200 RDVLRWCGVMGAS----AGAANVCFEGAEDLPGGGGCKYGTSLRREVAMDPAHDVILAYM 255
Query: 197 MNGEVLKRDHGYPLRVVVPGVIGARSVKWLDRIDIIEEECQGFFMQKDYKMFPPSVDWD- 255
NGE L DHG+P+RV+VPG IG R VKWL RI + E + ++ +D ++ P VD +
Sbjct: 256 QNGEPLTPDHGFPVRVIVPGFIGGRMVKWLKRIIVASSESESYYHYRDNRVLPSHVDAEL 315
Query: 256 ---NIVWSTRKPQMDYPVQSAICSLEDTNAIIPGEV-------TVTGYALSGGGRGIERV 305
W + ++ +++ + + ++P T+ GYA SGGGR + RV
Sbjct: 316 ANAEAWWYKPEYMINELNINSVITTPGHDEVLPINALTTQRPYTMKGYAYSGGGRKVTRV 375
Query: 306 DISTDGGKTWFGAVRYQKEGVPYVAGDISSDKWAWVLFKT---VIDVKGDTEVIVKAVDS 362
+++ DGG+TW P G W W + V+++ E+ V+A D
Sbjct: 376 EVTLDGGETW-QVCNLDHPERPTKYGKY----WCWCFWSVDVEVLELLAAKEIAVRAWDE 430
Query: 363 SANVQPESVETIWNLRGILNTCWHRVRLLT 392
S N QPE + IWNL G++N CW RV+ T
Sbjct: 431 SLNTQPEKL--IWNLMGMMNNCWFRVKTKT 458
>Os08g0468100 Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1)
Length = 916
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/390 (34%), Positives = 202/390 (51%), Gaps = 33/390 (8%)
Query: 20 RHPSL-RINAKEPFNAEA-TRRDLVASYITPVDLFLKRNHGPIPILHDIDSYYVTVAGLI 77
R+PSL R+ K P N E R + +ITP L RNHG +P D ++ V V GL+
Sbjct: 108 RNPSLIRLTGKHPLNCEPPLARLMHHGFITPAALHYVRNHGAVP-RGDWSTWTVDVTGLV 166
Query: 78 ERPAKLYLND-IKKLPKYNVTATLQCAGNRRTEMSKSRKVRGVGWDVCALGNATWGGAKL 136
+RP +L +++ + P + TL CAGNRR E + ++ G W + + W GA+L
Sbjct: 167 KRPMRLTMDELVNGFPAVEIPVTLVCAGNRRKEQNMVQQTVGFNWGAAGVSTSVWRGARL 226
Query: 137 SDVLQLIGVPYHTEITPS--GGKHVEFTSVDQCPEEKGGPYKASISLGHATNPAADVLVA 194
DVL+ G I PS G +V F + P G Y SI+ A +P+ D+++A
Sbjct: 227 RDVLRRCG------IMPSKGGALNVCFEGAEDLPGGGGSKYGTSITRQWALDPSRDIMLA 280
Query: 195 YEMNGEVLKRDHGYPLRVVVPGVIGARSVKWLDRIDIIEEECQGFFMQKDYKMFPPSVDW 254
Y NGE L DHG+P+R ++PG IG R VKW+ RI + E ++ KD ++ P VD
Sbjct: 281 YMQNGEPLLPDHGFPVRAIIPGCIGGRMVKWVKRIIVTTAESDNYYHYKDNRVLPSHVDA 340
Query: 255 D----NIVWSTRKPQMDYPVQSAICSLEDTNAIIPGE-------VTVTGYALSGGGRGIE 303
+ + W + ++ +++ + + I+P T+ GYA SGGG+ I
Sbjct: 341 ELANADAWWYKPEYIINELNVNSVITTPGHDEILPINGITTQRGYTMKGYAYSGGGKRIT 400
Query: 304 RVDISTDGGKTWFGAVRYQKEGVPYVAGDISSDKWAWVLFKT---VIDVKGDTEVIVKAV 360
RV+++ DGG+TW V E P G W W + V+D+ G E+ V+A
Sbjct: 401 RVEVTLDGGETWLVCVLDLPEK-PTKYG----KHWCWCFWSVEVEVLDLLGAKEIAVRAW 455
Query: 361 DSSANVQPESVETIWNLRGILNTCWHRVRL 390
D S N QPE + IWNL G++N CW +V++
Sbjct: 456 DQSHNTQPEKL--IWNLMGMMNNCWFKVKV 483
>Os08g0468700 Similar to Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1)
Length = 916
Score = 211 bits (537), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 134/390 (34%), Positives = 203/390 (52%), Gaps = 33/390 (8%)
Query: 20 RHPSL-RINAKEPFNAEA-TRRDLVASYITPVDLFLKRNHGPIPILHDIDSYYVTVAGLI 77
R+P L R+ K P N EA R + +ITP L RNHG +P D ++ V V GL+
Sbjct: 108 RNPLLIRLTGKHPLNCEAPLARLMHHGFITPAALHFVRNHGAVP-RGDWSTWTVEVTGLV 166
Query: 78 ERPAKLYLND-IKKLPKYNVTATLQCAGNRRTEMSKSRKVRGVGWDVCALGNATWGGAKL 136
+RP +L +++ + P V TL C+GNRR E + ++ G + A+ + W GA+L
Sbjct: 167 KRPMRLTVDELVNGFPAVEVPVTLACSGNRRKEQNMVQQTVGFNFGAAAVSTSVWHGARL 226
Query: 137 SDVLQLIGVPYHTEITPS--GGKHVEFTSVDQCPEEKGGPYKASISLGHATNPAADVLVA 194
DVL+ G I PS G +V F + P G Y SI+ A +P+ D+++A
Sbjct: 227 RDVLRRCG------IMPSKGGALNVCFEGAEDLPGGGGSKYGTSITRQWALDPSRDIMLA 280
Query: 195 YEMNGEVLKRDHGYPLRVVVPGVIGARSVKWLDRIDIIEEECQGFFMQKDYKMFPPSVDW 254
Y NGE L DHG+P+R ++PG G R VKW+ RI + E ++ KD ++FP VD
Sbjct: 281 YMQNGEPLLPDHGFPVRAIIPGCTGGRMVKWVKRIIVTTAESDNYYHYKDNRVFPSHVDA 340
Query: 255 D----NIVWSTRKPQMDYPVQSAICSLEDTNAIIPGE-------VTVTGYALSGGGRGIE 303
+ + W + ++ +++ + + I+P T+ GYA SGGG+ I
Sbjct: 341 ELANADAWWYKPEYIINELNVNSVITAPGHDEILPINGITTQRGYTMKGYAYSGGGKRIT 400
Query: 304 RVDISTDGGKTWFGAVRYQKEGVPYVAGDISSDKWAWVLFKT---VIDVKGDTEVIVKAV 360
RV+++ DGG+TW V E P G W W + V+D+ G E+ V+A
Sbjct: 401 RVEVTLDGGETWLVCVLDLPEK-PTKYG----KHWCWCFWSVEVEVLDLLGAKEIAVRAW 455
Query: 361 DSSANVQPESVETIWNLRGILNTCWHRVRL 390
D S N QPE + IWNL G++N CW +V++
Sbjct: 456 DQSHNTQPEKL--IWNLMGMMNNCWFKVKV 483
>AK110249
Length = 980
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/410 (33%), Positives = 201/410 (49%), Gaps = 51/410 (12%)
Query: 24 LRINAKEPFNAEATRRDLVAS-YITPVDLFLKRNHGPIPIL--HDIDSYYVTVAGLIERP 80
+R+ K P N EA DL + ++TP +LF R+HG P + + + + V GL+ R
Sbjct: 95 IRLTGKHPCNTEAPLADLFSKGFLTPQNLFYVRSHGDTPRVTQEQAEQWKLKVHGLVHRE 154
Query: 81 AKLYLNDIK-KLPKYNVTATLQCAGNRRTEMSKSRKVRGVGWDVCALGNATWGGAKLSDV 139
+ + ++K K P Y + TL CAGNRR E + K G W + + + G L+D+
Sbjct: 155 IEFSIQELKEKFPTYTLPITLVCAGNRRKEQNMVAKGLGFNWGAAGVSTSLFTGVYLADI 214
Query: 140 LQ--------LIGVPYHTEITPSGGKHVEFTSVDQCPEEKGGPYKASISLGHATNPAADV 191
L+ L P + + P +HV F D P+ G Y S L A + + +
Sbjct: 215 LEYCKPKSPLLSSFPAYDVVVPGRARHVVFEGADVLPK---GKYGTSQRLNWALDRSKGM 271
Query: 192 LVAYEMNGEVLKRDHGYPLRVVVPGVIGARSVKWLDRIDIIEEECQGFFMQKDYKMFPPS 251
++A+ +NGE L DHGYPLR+VVPG IG R VKWLDRI++ + E Q D K+ P
Sbjct: 272 MIAWGLNGEDLSPDHGYPLRLVVPGQIGGRMVKWLDRIEVSDRESQHHLHFHDNKVLPTE 331
Query: 252 VDWDNIV-----WSTRKPQM-DYPVQSAICSLEDTNAII---------PGEVTVTGYALS 296
V D W K + D V +AICS D N +I P + + GYA +
Sbjct: 332 VTADQARSEMHWWYDPKYIINDLNVNAAICS-PDHNQVIDFVGSSSSQPQILPIQGYAYT 390
Query: 297 GGGRGIERVDISTDGGKTWFGAVRYQKEGV---------PYVAG-DISSDK--WAWVLFK 344
GGGR I RV+IS D G TW A + E + PY D+SS + +AW ++
Sbjct: 391 GGGRRIARVEISLDDGNTWKCASIHCPEDLYRMYPIQDHPYFGTLDLSSSEMSFAWCFWR 450
Query: 345 TVIDVKGD-----TEVI-VKAVDSSANVQPESVETIWNLRGILNTCWHRV 388
IDV+ D +VI V+A+D P + WN ++N+ W RV
Sbjct: 451 LDIDVQADLIAKEVKVISVRAMDEGLATMPR--DMYWNATSMMNSWWFRV 498
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.136 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,052,412
Number of extensions: 682583
Number of successful extensions: 1362
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1340
Number of HSP's successfully gapped: 6
Length of query: 400
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 297
Effective length of database: 11,657,759
Effective search space: 3462354423
Effective search space used: 3462354423
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)