Os12g0442800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Sulfite oxidase (EC 1.8.3.1) (Moco containig protein AtMCP) (At-SO) (AtSOX).
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Os12g0442800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Sulfite oxidase (EC 1.8.3.1) (Moco containig protein AtMCP) (At-SO) (AtSOX).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.68 | 0.381 | 8.41 | 0.172 | 1.59 | 1.74 | -0.212 | -4.35 | 0.371 | 20 | 25.73 | 250 | -- | -- |
| 70.53 | 0.391 | 8.35 | 0.649 | 1.61 | 1.34 | -0.526 | -- | 0.484 | 19.8 | 25.67 | 246 | -- | -- |
| 65.8 | 0.378 | 8.41 | 0.165 | 1.59 | 1.74 | -- | -4.46 | 0.366 | 20 | 25.71 | 250 | -- | -- |
| 71.12 | 0.393 | 8.35 | 0.675 | 1.64 | 1.31 | -- | -- | 0.484 | 19.8 | 25.6 | 243 | -- | -- |
| 150.48 | 0.571 | 8.43 | -0.315 | -- | 2.77 | -- | -4.83 | 0.0908 | -- | 24.5 | 457 | -- | -- |
| 99.5 | 0.468 | 8.34 | 0.88 | 2.07 | -- | -0.0287 | -- | 0.551 | 19.1 | -- | -- | -- | -- |
| 99.5 | 0.467 | 8.34 | 0.88 | 2.07 | -- | -- | -- | 0.551 | 19.1 | -- | -- | -- | -- |
| 162.48 | 0.594 | 8.35 | 0.427 | -- | 2.36 | -- | -- | 0.291 | -- | 24.4 | 458 | -- | -- |
| 82.56 | 0.423 | 8.37 | -- | 1.57 | 1.46 | -- | -- | 0.391 | 20 | 25.35 | 250 | -- | -- |
| 324.5 | 0.842 | 8.3 | 0.84 | -- | -- | -- | -- | 0.514 | -- | -- | -- | -- | -- |
| 119.91 | 0.512 | 8.37 | -- | 2.06 | -- | -- | -- | 0.453 | 19.1 | -- | -- | -- | -- |
| 167.09 | 0.602 | 8.36 | -- | -- | 2.43 | -- | -- | 0.231 | -- | 24.3 | 465 | -- | -- |
| 343.1 | 0.865 | 8.32 | -- | -- | -- | -- | -- | 0.42 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.91 | temperature | 25 | 270 | > th | dose independent | rect. | 10 | 8 |
| 2 | 55.06 | temperature | 10 | 270 | > th | dose dependent | rect. | 2 | 15 |
| 5 | 56.16 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 13 |
| 6 | 56.32 | temperature | 20 | 270 | > th | dose dependent | rect. | 10 | 8 |
| 34 | 58.70 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 46 | 59.18 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 12 |
| 55 | 59.63 | temperature | 20 | 270 | > th | dose dependent | sin | 23 | NA |
| 116 | 61.28 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 12 |
| 151 | 61.86 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 8 |
| 157 | 61.92 | temperature | 10 | 270 | > th | dose dependent | sin | 23 | NA |
| 158 | 61.92 | temperature | 30 | 270 | < th | dose dependent | sin | 23 | NA |
| 178 | 62.42 | temperature | 25 | 90 | > th | dose dependent | sin | 20 | NA |
| 306 | 63.90 | temperature | 25 | 270 | > th | dose independent | rect. | 4 | 14 |
| 320 | 64.06 | temperature | 25 | 270 | > th | dose independent | sin | 23 | NA |
| 415 | 65.17 | temperature | 25 | 10 | > th | dose independent | rect. | 12 | 8 |
| 416 | 65.19 | temperature | 25 | 270 | < th | dose independent | sin | 23 | NA |
| 420 | 65.20 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 14 |
| 485 | 65.69 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 10 |
| 489 | 65.70 | temperature | 25 | 270 | > th | dose dependent | rect. | 9 | 22 |
| 554 | 66.29 | temperature | 10 | 720 | > th | dose dependent | sin | 4 | NA |
| 568 | 66.41 | temperature | 30 | 720 | < th | dose dependent | sin | 4 | NA |
| 668 | 67.00 | temperature | 25 | 270 | > th | dose dependent | no | NA | NA |
| 762 | 67.52 | temperature | 25 | 720 | > th | dose independent | rect. | 5 | 9 |
| 836 | 67.86 | temperature | 30 | 270 | < th | dose independent | rect. | 17 | 19 |
| 959 | 68.69 | radiation | 1 | 270 | > th | dose independent | rect. | 12 | 17 |
| 968 | 68.76 | radiation | 1 | 270 | > th | dose independent | rect. | 12 | 7 |